BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048486
         (2116 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ42655.1| putative RNA-directed DNA polymerase [Rosa chinen...   829   0.0  
gb|PRQ41835.1| putative RNA-directed DNA polymerase [Rosa chinen...   827   0.0  
gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinen...   799   0.0  
gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinen...   801   0.0  
gb|PRQ52323.1| putative RNA-directed DNA polymerase [Rosa chinen...   801   0.0  
gb|PRQ35290.1| putative RNA-directed DNA polymerase [Rosa chinen...   796   0.0  
gb|PKA59461.1| Retrovirus-related Pol polyprotein from transposo...   791   0.0  
gb|PRQ37607.1| putative RNA-directed DNA polymerase [Rosa chinen...   797   0.0  
gb|PRQ34236.1| putative RNA-directed DNA polymerase [Rosa chinen...   779   0.0  
gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinen...   801   0.0  
gb|PRQ43270.1| putative RNA-directed DNA polymerase [Rosa chinen...   773   0.0  
gb|KYP39692.1| Retrovirus-related Pol polyprotein from transposo...   787   0.0  
gb|KYP39694.1| Retrovirus-related Pol polyprotein from transposo...   790   0.0  
gb|PNX71168.1| beta-galactosidase [Trifolium pratense]                764   0.0  
gb|PRQ41895.1| putative RNA-directed DNA polymerase [Rosa chinen...   759   0.0  
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      773   0.0  
gb|PRQ56213.1| putative RNA-directed DNA polymerase [Rosa chinen...   767   0.0  
gb|PRQ49627.1| putative RNA-directed DNA polymerase [Rosa chinen...   764   0.0  
gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinen...   770   0.0  
gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinen...   770   0.0  

>gb|PRQ42655.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 927

 Score =  829 bits (2141), Expect = 0.0
 Identities = 405/625 (64%), Positives = 493/625 (78%), Gaps = 6/625 (0%)
 Frame = +1

Query: 31   NDNGNRDEETDEDVNSPQDSTS-DPIPTTVEPDPNPSQGSS-STPISVTPDLVVTQEEAI 204
            N +    E+T+E+   P  +   +       P  NP Q      PI        T    +
Sbjct: 304  NQSDRLIEQTEEEAELPPSTPMHEDTSRETHPQVNPCQEVDLHNPIESNHSS--TPRRPV 361

Query: 205  EARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHE 384
            E RYP R N+G+P+KQY+P+L++++KYPI N+VS+H+L++     + +LSTV IP+ + E
Sbjct: 362  EPRYPQRSNKGIPRKQYEPDLRTKAKYPIANHVSTHRLSESYALTVNQLSTVAIPRTVQE 421

Query: 385  AIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLV 564
            A+ DP+WR A+N+EM+ALQ++ TW++   PQGKK +GCRWI+TVKL A+G I+RYKARLV
Sbjct: 422  ALDDPKWRIAMNEEMEALQKNDTWEIAPLPQGKKTIGCRWIYTVKLKADGSIDRYKARLV 481

Query: 565  AKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMD 744
            AKGYTQKYGVDY +TFAPVAKINTIRIL+S+AA  DWPL Q+DVKNAFL+G LEEEVYMD
Sbjct: 482  AKGYTQKYGVDYQETFAPVAKINTIRILMSLAATYDWPLQQYDVKNAFLHGDLEEEVYMD 541

Query: 745  PPPGINCG----DKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHG 912
             PPG  C      KVC+L+K+LYGLKQSPRAWFGRF+  MK  GY+QS++DHTLF++   
Sbjct: 542  MPPGSQCKLSEVGKVCRLRKSLYGLKQSPRAWFGRFTKAMKAFGYRQSNSDHTLFIRHKA 601

Query: 913  EKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMC 1092
             K T LIVYVDDMVVTG+DP E K LQ  LATEFE+KDLGQL+YFLGIEVARS+ GI++ 
Sbjct: 602  GKLTVLIVYVDDMVVTGDDPVERKALQDYLATEFEMKDLGQLKYFLGIEVARSKEGISLS 661

Query: 1093 QRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPD 1272
            QRKYVLDLL ETGMLDCQPVETP+E+NH L     Q+P NK RYQ LVGKLIYL+HTRPD
Sbjct: 662  QRKYVLDLLTETGMLDCQPVETPMEMNHRLGEWKDQVPTNKSRYQCLVGKLIYLSHTRPD 721

Query: 1273 IAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGDK 1452
            IAYAV VVS+FMHAP++DHM AVYRILRYLKA PGKGLLF K D   V GYTD DWAG K
Sbjct: 722  IAYAVGVVSQFMHAPSEDHMNAVYRILRYLKAAPGKGLLFAKKDKLIVEGYTDADWAGSK 781

Query: 1453 SDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIK 1632
             D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAEFRGM HGVCELLWI+ +L+DLG K
Sbjct: 782  VDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEFRGMAHGVCELLWIRHLLKDLGFK 841

Query: 1633 VKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADM 1812
             ++ M+L+CDN+AA++IA+NPVQHDRTKHVE+DRHFIK++L++K I  PFV SEEQLAD+
Sbjct: 842  NRKTMDLHCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKENLDRKIIYFPFVQSEEQLADI 901

Query: 1813 LTKAVCRNTFHSSLDKLGMTNIHSP 1887
            LTKAV    F+SSLDKLGM +I++P
Sbjct: 902  LTKAVSGKVFNSSLDKLGMIDIYAP 926


>gb|PRQ41835.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1245

 Score =  827 bits (2137), Expect = 0.0
 Identities = 406/628 (64%), Positives = 498/628 (79%), Gaps = 9/628 (1%)
 Frame = +1

Query: 31   NDNGNRDEETDEDVNSPQDSTSDPIPTTVEPDPNPS-----QGSSSTPISVTPDLVVTQE 195
            N +    E+T+E+ + P    S P+      + +P      + S   PI      V  + 
Sbjct: 622  NQSDRLMEQTEEEADLPP---STPLHEDTSRETHPQVNHCQEVSLYNPIESNHSSVPIRH 678

Query: 196  EAIEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKN 375
              +E RYP R N+G+P+KQY+PEL+++ KYPI N+VS+H+L++     I +LSTV IP+ 
Sbjct: 679  --VEPRYPQRSNKGIPRKQYEPELRAKVKYPIANHVSTHRLSESYALTINQLSTVAIPRT 736

Query: 376  IHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKA 555
            + EA+ DP+WR A+N+EM+ALQ++ TW++V  PQGKK VGCRWI+TVKL A+G I+RYKA
Sbjct: 737  VQEALDDPKWRTAMNEEMEALQKNATWEIVPLPQGKKTVGCRWIYTVKLKADGGIDRYKA 796

Query: 556  RLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEV 735
            RLVAKGYTQKYGVDY +TFAPVAKINTIRIL+S+AA  DWPL Q+DVKNAFL+G LEEEV
Sbjct: 797  RLVAKGYTQKYGVDYQETFAPVAKINTIRILMSLAATYDWPLQQYDVKNAFLHGDLEEEV 856

Query: 736  YMDPPPGINCG----DKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVK 903
            YMD PPG  C      KVC+LKK+LYGLKQSPRAWFGRF+  MK  GY+QS++DHTLF++
Sbjct: 857  YMDMPPGSQCRLSEVGKVCRLKKSLYGLKQSPRAWFGRFTKAMKAFGYRQSNSDHTLFIR 916

Query: 904  IHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGI 1083
                K T LIVYVDDMVVTG+DP E K LQ  LATEFE+KDLG+L+YFLGIEVARS+ GI
Sbjct: 917  RKAGKLTVLIVYVDDMVVTGDDPVERKALQDYLATEFEMKDLGKLKYFLGIEVARSKEGI 976

Query: 1084 TMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHT 1263
            ++ QRKYVLDLL +TGMLDCQP +TP+E+NH L     Q+PANK RYQ LVG+LIYL+HT
Sbjct: 977  SLSQRKYVLDLLTDTGMLDCQPADTPMEMNHRLGEWKDQVPANKSRYQCLVGRLIYLSHT 1036

Query: 1264 RPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWA 1443
            RPDIAYAVSVVS+FMHAP++DHM AVYRILRYLKA PGKGLLF K D   V GYTD DWA
Sbjct: 1037 RPDIAYAVSVVSQFMHAPSEDHMNAVYRILRYLKAAPGKGLLFAKKDKLIVEGYTDADWA 1096

Query: 1444 GDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDL 1623
            G K D +STSGYFT+V GNLVTWR KKQKVVARSSAEAEFRGM HGVCELLWI+ +L+DL
Sbjct: 1097 GSKVDRRSTSGYFTFVGGNLVTWRCKKQKVVARSSAEAEFRGMAHGVCELLWIRHLLKDL 1156

Query: 1624 GIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQL 1803
            G K ++ M+L+CDN+AA++IA+NPVQHDRTKHVE+DRHFIK++L++K I+ PFV SEEQL
Sbjct: 1157 GFKSRKSMDLHCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKENLDRKIIRFPFVQSEEQL 1216

Query: 1804 ADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            AD+LTKAV    F+SSLDKLGM +I++P
Sbjct: 1217 ADILTKAVSGKVFNSSLDKLGMIDIYAP 1244


>gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 697

 Score =  799 bits (2063), Expect = 0.0
 Identities = 386/627 (61%), Positives = 493/627 (78%), Gaps = 9/627 (1%)
 Frame = +1

Query: 34   DNGNR---DEETDEDVNSPQDSTSDPIPTTVEPDPNPSQGSSSTPISVTPDLVVTQ---E 195
            +NGN+    E    +++SP  ST    P   E DP       + P+    D + ++   E
Sbjct: 76   ENGNQLPTPESPVREISSP--STIPSTPMLPEDDPEVI----NNPVFEFHDNINSEPNTE 129

Query: 196  EAIEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKN 375
                 + P RKNRG PK QY+P+ K+++KYPI+NY+SSH+L+K   + +  LS ++IP  
Sbjct: 130  TEPSHKLPFRKNRGQPKAQYEPDPKAKAKYPISNYMSSHRLSKSYASFVFHLSAIIIPNK 189

Query: 376  IHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKA 555
            + +A+ D +W KA+ +EM+ALQ+S TW++V +P GK++VGCRWI+T+K  A+G ++RYKA
Sbjct: 190  VQDALADRKWTKAMEEEMEALQKSQTWELVPKPAGKRIVGCRWIYTLKYAADGTLDRYKA 249

Query: 556  RLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEV 735
            RLVAKGYTQ YG+DY +TFAPVAK+NT+R+L+S+AAN DWPL QFDVKNAFL+G L+EEV
Sbjct: 250  RLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHGDLKEEV 309

Query: 736  YMDPPPGINCGDK---VCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKI 906
            YMD PPG +   +   VCKLKK+LYGLKQSPRAWFGRFS  MK  GYKQS++DHTLF+K 
Sbjct: 310  YMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDHTLFLKH 369

Query: 907  HGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGIT 1086
              +K TALI+YVDDM+VTGNDP+E+K+L+  L++ FE+KDLG L+YFLGIEVARS+ GI+
Sbjct: 370  RKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSKEGIS 429

Query: 1087 MCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTR 1266
            + QRKYV+DLL ETG+L CQP +TP+E NH L     Q+P NKERYQ+LVGKLIYL+HTR
Sbjct: 430  LSQRKYVVDLLIETGLLACQPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTR 489

Query: 1267 PDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAG 1446
            PDIAYAVSVVS+FMHAP++DHM AV+RILRYLK  PGKG++F K +   + GYTD DWAG
Sbjct: 490  PDIAYAVSVVSQFMHAPSEDHMHAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDADWAG 549

Query: 1447 DKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLG 1626
              +D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAE+RGM HGVCE+LW++ +++DLG
Sbjct: 550  SITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLMKDLG 609

Query: 1627 IKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLA 1806
             K K  MNLYCDN+AA+ IA+NPVQHDRTKHVE+DRHFIK+ LE KTI +P V +E+QLA
Sbjct: 610  FKPKHAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESKTINMPHVCTEDQLA 669

Query: 1807 DMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            D+LTKAV    FHSSLDKLGM +I+SP
Sbjct: 670  DILTKAVSGKVFHSSLDKLGMRDIYSP 696


>gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1014

 Score =  801 bits (2069), Expect = 0.0
 Identities = 385/633 (60%), Positives = 497/633 (78%), Gaps = 10/633 (1%)
 Frame = +1

Query: 19   TEVDNDNGNR---DEETDEDVNSPQDSTSDPIPTTVEPDP---NPSQGSSSTPISVTPDL 180
            +E+  ++GN+    E    D++SP  ST+   P   E DP   N         ++  P+ 
Sbjct: 383  SEMAVEHGNQLPTPESAVRDISSP--STTPSTPMLPEDDPEVINNHVFECHDNVNSMPNT 440

Query: 181  VVTQEEAIEA-RYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELST 357
             +   + I   + P RKNRG PK QY+P+ K+++KYPI+NY+SSH+L+K   + +  LS 
Sbjct: 441  EIESSDIIGVHKLPFRKNRGQPKVQYEPDPKAKAKYPISNYMSSHRLSKSYASFVFHLSA 500

Query: 358  VVIPKNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGK 537
            ++IP  + +A+ +P+W KA+ DEM+ALQ++ TW++V +P GK+ VGCRWI+T+K  A+G 
Sbjct: 501  IIIPNKVQDALANPKWTKAMEDEMEALQKNDTWELVPKPAGKRAVGCRWIYTLKYAADGT 560

Query: 538  IERYKARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNG 717
            ++RYKARLVAKGYTQ YG+DY +TFAPVAK+NT+R+L+S+AAN DWPL QFDVKNAFL+G
Sbjct: 561  LDRYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHG 620

Query: 718  TLEEEVYMDPPPGINCGDK---VCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADH 888
             L+EEVYMD PPG +   +   VCKLKK+LYGLKQSPRAWFGRFS  MK  GYKQS++DH
Sbjct: 621  DLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDH 680

Query: 889  TLFVKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVAR 1068
            TLF+K   +K TALI+YVDDM+VTGNDP+E+K+L+  L++ FE+KDLG L+YFLGIEVAR
Sbjct: 681  TLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVAR 740

Query: 1069 SRRGITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLI 1248
            S+ GI + QRKYV+DLL ETG+L C+P +TP+E NH L     Q+P NKERYQ+LVGKLI
Sbjct: 741  SKEGIALSQRKYVVDLLIETGLLACRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLI 800

Query: 1249 YLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYT 1428
            YL+HTRPDIAYAVSVVS+FMHAP++DHM+AV+RILRYLK  PGKG++F K +   + GYT
Sbjct: 801  YLSHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYT 860

Query: 1429 DGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKR 1608
            D DWAG  +D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAE+RGM HGVCE+LW++ 
Sbjct: 861  DADWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRH 920

Query: 1609 ILRDLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVN 1788
            +++DLG K K  MNLYCDN+AA+ IA+NPVQHDRTKHVE+DRHFIK+ LE +TI +P V 
Sbjct: 921  LMKDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVR 980

Query: 1789 SEEQLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            +E+QLAD+LTKAV    FHSSLDKLGM +I+SP
Sbjct: 981  TEDQLADILTKAVSGKVFHSSLDKLGMRDIYSP 1013


>gb|PRQ52323.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1014

 Score =  801 bits (2069), Expect = 0.0
 Identities = 385/633 (60%), Positives = 497/633 (78%), Gaps = 10/633 (1%)
 Frame = +1

Query: 19   TEVDNDNGNR---DEETDEDVNSPQDSTSDPIPTTVEPDP---NPSQGSSSTPISVTPDL 180
            +E+  ++GN+    E    D++SP  ST+   P   E DP   N         ++  P+ 
Sbjct: 383  SEMAAEHGNQLPTPESAVRDISSP--STTPSTPMLPEDDPEVINNPVFECHDNVNSMPNT 440

Query: 181  VVTQEEAIEA-RYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELST 357
             +   + I   + P RKNRG PK QY+P+ K+++KYPI+NY+SSH+L+K   + +  LS 
Sbjct: 441  EIESSDIIGVHKLPFRKNRGQPKVQYEPDPKAKAKYPISNYMSSHRLSKSYASFVFHLSA 500

Query: 358  VVIPKNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGK 537
            ++IP  + +A+ +P+W KA+ DEM+ALQ++ TW++V +P GK+ VGCRWI+T+K  A+G 
Sbjct: 501  IIIPNKVQDALANPKWTKAMEDEMEALQKNHTWELVPKPAGKRAVGCRWIYTLKYAADGT 560

Query: 538  IERYKARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNG 717
            ++RYKARLVAKGYTQ YG+DY +TFAPVAK+NT+R+L+S+AAN DWPL QFDVKNAFL+G
Sbjct: 561  LDRYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHG 620

Query: 718  TLEEEVYMDPPPGINCGDK---VCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADH 888
             L+EEVYMD PPG +   +   VCKLKK+LYGLKQSPRAWFGRFS  MK  GYKQS++DH
Sbjct: 621  DLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDH 680

Query: 889  TLFVKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVAR 1068
            TLF+K   +K TALI+YVDDM+VTGNDP+E+K+L+  L++ FE+KDLG L+YFLGIEVAR
Sbjct: 681  TLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVAR 740

Query: 1069 SRRGITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLI 1248
            S+ GI + QRKYV+DLL ETG+L C+P +TP+E NH L     Q+P NKERYQ+LVGKLI
Sbjct: 741  SKEGIALSQRKYVVDLLIETGLLACRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLI 800

Query: 1249 YLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYT 1428
            YL+HTRPDIAYAVSVVS+FMHAP++DHM+AV+RILRYLK  PGKG++F K +   + GYT
Sbjct: 801  YLSHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYT 860

Query: 1429 DGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKR 1608
            D DWAG  +D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAE+RGM HGVCE+LW++ 
Sbjct: 861  DADWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRH 920

Query: 1609 ILRDLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVN 1788
            +++DLG K K  MNLYCDN+AA+ IA+NPVQHDRTKHVE+DRHFIK+ LE +TI +P V 
Sbjct: 921  LMKDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVR 980

Query: 1789 SEEQLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            +E+QLAD+LTKAV    FHSSLDKLGM +I+SP
Sbjct: 981  TEDQLADILTKAVSGKVFHSSLDKLGMRDIYSP 1013


>gb|PRQ35290.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1060

 Score =  796 bits (2056), Expect = 0.0
 Identities = 386/626 (61%), Positives = 491/626 (78%), Gaps = 9/626 (1%)
 Frame = +1

Query: 37   NGNRDEETDED-VNSPQDST---SDPIPTTVEPDPNPSQGSS-STPISVTPDLVVTQEEA 201
            N   +E T  D +N  QD +   +  IP +  P  +P Q      P++      +   E+
Sbjct: 457  NSETEETTFLDSLNQNQDVSEAYTQDIPPSASPTEDPCQNCPPQVPLNFNESSGL---ES 513

Query: 202  IEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIH 381
            +E R   R  +G+PKKQY+P++K+++KYPI N++S+H+++     ++++LS V IP N+ 
Sbjct: 514  VEPRKSQRVTKGIPKKQYEPDIKAKAKYPIANFMSNHRISGSHALVVDQLSIVSIPSNVQ 573

Query: 382  EAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARL 561
            +A+ DP+W KA+N+EM+ALQ++ TW++V  P GKK VGCRW+FTVKL+A+G I RYKARL
Sbjct: 574  DALTDPKWTKAMNEEMEALQKNATWELVPMPVGKKTVGCRWVFTVKLNADGTINRYKARL 633

Query: 562  VAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYM 741
            VAKGYTQ+YG+DY +TFAPVAKINT+RIL+S+AANKDWPLHQFDVKNAFLNG LEEEVYM
Sbjct: 634  VAKGYTQRYGIDYEETFAPVAKINTVRILISLAANKDWPLHQFDVKNAFLNGNLEEEVYM 693

Query: 742  DPPPGI----NCGDKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIH 909
            D PPG+    +   KVCKLKK+LYGLKQSPRAWFGRFS  MK  GY+QS++DHTLF+K  
Sbjct: 694  DVPPGVKNYPSDVGKVCKLKKSLYGLKQSPRAWFGRFSKSMKAFGYRQSNSDHTLFIKRK 753

Query: 910  GEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITM 1089
              K TALIVYVDDM+VTG+DP E+  LQ  ++ EFE+KDLGQL+YFLGIEVARS++GI +
Sbjct: 754  NGKITALIVYVDDMIVTGDDPKEMNELQKYMSKEFEMKDLGQLKYFLGIEVARSKKGILL 813

Query: 1090 CQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRP 1269
             QRKYVLDLLAE GMLDC+P+ETPIE++H L I   Q+P +K RYQ+LVG+LIYL+HTRP
Sbjct: 814  SQRKYVLDLLAEKGMLDCRPMETPIEMSHRLAIYPDQVPTDKGRYQRLVGRLIYLSHTRP 873

Query: 1270 DIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGD 1449
            DIAYAVSVVS+FMH P+++HM  V+RILRYLK  P                    DWAGD
Sbjct: 874  DIAYAVSVVSQFMHCPSEEHMDVVFRILRYLKMAP--------------------DWAGD 913

Query: 1450 KSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGI 1629
            K+D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAEFRGM HGVCE+LWI+ +L+DLG 
Sbjct: 914  KTDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEFRGMAHGVCEMLWIRNVLKDLGY 973

Query: 1630 KVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLAD 1809
            K+K+PM+L+CDN AA++IA+NPVQHDRTKHVE+DRHFIK++L++K I+ PFVNSEEQLAD
Sbjct: 974  KLKKPMDLHCDNTAAIEIAHNPVQHDRTKHVEVDRHFIKENLDRKVIRFPFVNSEEQLAD 1033

Query: 1810 MLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            +LTK V R  F SS+DKLGM +I++P
Sbjct: 1034 VLTKGVSRKVFDSSVDKLGMIDIYAP 1059


>gb|PKA59461.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 951

 Score =  791 bits (2043), Expect = 0.0
 Identities = 377/541 (69%), Positives = 455/541 (84%), Gaps = 4/541 (0%)
 Frame = +1

Query: 277  SKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHEAIKDPRWRKAVNDEMDALQRSGTW 456
            +KY INNYVSSH+L +     + +LSTV IP N+ +A+ DP+WRKA+N+EM+ALQ++ TW
Sbjct: 410  TKYSINNYVSSHRLTESYAFTVNQLSTVSIPSNVQDALADPKWRKAMNEEMEALQKNATW 469

Query: 457  DVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLVAKGYTQKYGVDYGDTFAPVAKINT 636
            ++V  P+G K +GCRW+FTVKL ++G I+RYKARLVAKGYTQ+YGVDY DTFAPVAKINT
Sbjct: 470  ELVLLPKGMKPIGCRWVFTVKLKSDGSIDRYKARLVAKGYTQRYGVDYQDTFAPVAKINT 529

Query: 637  IRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMDPPPGI----NCGDKVCKLKKALYG 804
            IRIL+SIAAN+DWPL QFDVKNAFLNG LEEEVYM+ PPG+    +C  +VCKLKK+LYG
Sbjct: 530  IRILISIAANRDWPLQQFDVKNAFLNGDLEEEVYMELPPGVKNGSSCKGEVCKLKKSLYG 589

Query: 805  LKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHGEKTTALIVYVDDMVVTGNDPDEIK 984
            LKQSPRAWFGRFS  MK  GYKQS++DHTLF+K    K TALIVYVD +V+TG+DP E+K
Sbjct: 590  LKQSPRAWFGRFSTTMKEFGYKQSNSDHTLFIKHKKGKVTALIVYVDGIVLTGDDPCEMK 649

Query: 985  RLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMCQRKYVLDLLAETGMLDCQPVETPI 1164
             LQ  LAT+FE+K+LGQL+YFLGIEVARS+ GI + QRKYVLDLL ETGML C+PVETP+
Sbjct: 650  ALQEYLATKFEMKNLGQLKYFLGIEVARSKHGILLSQRKYVLDLLTETGMLGCKPVETPM 709

Query: 1165 EVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVY 1344
            E+NH L I   Q PA+K RYQ+LVG+LIYL+HTRPDIAYAVSVVS+FMHAP+++HM+AVY
Sbjct: 710  EMNHKLGILPDQAPADKGRYQRLVGRLIYLSHTRPDIAYAVSVVSQFMHAPSEEHMEAVY 769

Query: 1345 RILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKK 1524
            RILRYLK  PGKGLLF K     + GYTD DWAGD++  +STSGYFT+V GNLVTWRSKK
Sbjct: 770  RILRYLKGAPGKGLLFSKNGISNIEGYTDSDWAGDQTTRRSTSGYFTFVEGNLVTWRSKK 829

Query: 1525 QKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIKVKEPMNLYCDNQAAVKIANNPVQH 1704
            QKVVARSSAEAEFRGM HGVCELLWI+ ILRDLGI+   PMNL+CDN+A ++IA NPVQH
Sbjct: 830  QKVVARSSAEAEFRGMAHGVCELLWIRNILRDLGIEYATPMNLHCDNKATIEIAQNPVQH 889

Query: 1705 DRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADMLTKAVCRNTFHSSLDKLGMTNIHS 1884
            DRTKHVE+DRHFIK++L++K I+ PF+ SE QLAD+LTKAV    FH  +DKLGM +I++
Sbjct: 890  DRTKHVEVDRHFIKENLDEKIIQFPFIQSESQLADILTKAVSGKVFHGIIDKLGMIDIYA 949

Query: 1885 P 1887
            P
Sbjct: 950  P 950


>gb|PRQ37607.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1149

 Score =  797 bits (2059), Expect = 0.0
 Identities = 388/626 (61%), Positives = 494/626 (78%), Gaps = 9/626 (1%)
 Frame = +1

Query: 37   NGNRDEETDED-VNSPQDST---SDPIPTTVEPDPNPSQGSS-STPISVTPDLVVTQEEA 201
            N   +E T  D +N  QD +   +  IP +  P  +P Q      P++      +   E+
Sbjct: 539  NSETEETTFLDSLNQNQDVSEAHTQDIPPSTSPTEDPGQNDPPQVPLNFNESSGL---ES 595

Query: 202  IEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIH 381
            +E R   R  +G+PKKQY+P++K+++KYPI N++S+H+++     +I++LSTV IP N+ 
Sbjct: 596  VEPRKSQRVAKGIPKKQYEPDIKAKAKYPIANFMSNHRISGSHALVIDQLSTVSIPSNVQ 655

Query: 382  EAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARL 561
            +A+ +P+W KA+N+E++ALQ++ TW++V  P GKK VGCRW+FTVKL+A+G I RYKARL
Sbjct: 656  DALTNPKWTKAMNEELEALQKNATWELVPMPVGKKTVGCRWVFTVKLNADGTINRYKARL 715

Query: 562  VAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYM 741
            VAKGYTQ+YG+DY +TFAPVAKINT+RIL+S+AANKDWPLHQFDVKNAFLNG LEEEVYM
Sbjct: 716  VAKGYTQRYGIDYEETFAPVAKINTVRILISLAANKDWPLHQFDVKNAFLNGNLEEEVYM 775

Query: 742  DPPPGINCGD----KVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIH 909
            D PPG+        KVCKLKK+LYGLKQSPRAWFGRFS  M+  GY+QS++DHTLF+K  
Sbjct: 776  DVPPGVKNYPSEVGKVCKLKKSLYGLKQSPRAWFGRFSKSMRAFGYRQSNSDHTLFIKRK 835

Query: 910  GEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITM 1089
              K TALIVYVDDM+VTG+DP E+  LQ  L+ EFE+KDLGQL+YFLGIEVARS++GI++
Sbjct: 836  NGKITALIVYVDDMIVTGDDPKEMNELQKYLSKEFEMKDLGQLKYFLGIEVARSKKGISL 895

Query: 1090 CQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRP 1269
             QRKYVLDLL ETGMLDC P+ETPIE+NH L I   QIP +K RYQ+LVG+LIYL+HTRP
Sbjct: 896  SQRKYVLDLLTETGMLDCSPIETPIEMNHRLAIYPDQIPTDKGRYQRLVGRLIYLSHTRP 955

Query: 1270 DIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGD 1449
            DIAYA ++  +F            +RILRYLK  PGKGLLF+K D   V GYT  DWAGD
Sbjct: 956  DIAYA-NIWMQF------------FRILRYLKMAPGKGLLFEKKDELEVGGYTYADWAGD 1002

Query: 1450 KSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGI 1629
            K+D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAEFRGM HGVCE+LWI+ +L+DLG 
Sbjct: 1003 KTDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEFRGMAHGVCEMLWIRNVLKDLGY 1062

Query: 1630 KVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLAD 1809
            K+++PM+L+CDN+AA++IA+NPVQHDRTKHVE+DRHFIK++L++K I+ PFVNS+EQLAD
Sbjct: 1063 KLRQPMDLHCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKENLDRKVIRFPFVNSKEQLAD 1122

Query: 1810 MLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            +LTK VCR  F SS+DKLGM +I++P
Sbjct: 1123 VLTKGVCRKIFDSSVDKLGMIDIYAP 1148


>gb|PRQ34236.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 693

 Score =  779 bits (2011), Expect = 0.0
 Identities = 376/621 (60%), Positives = 473/621 (76%), Gaps = 3/621 (0%)
 Frame = +1

Query: 34   DNGNRDEETDEDVNSPQDSTSDPIPTTVEPDPNPSQGSSSTPISVTPDLVVTQEEAIEAR 213
            D G  D  +D+  N      S+P    V+  P+PS   SS  +       V  E  +   
Sbjct: 74   DYGQNDVVSDQGQNDVVSDISEP-DLEVKTSPSPSSPPSSQILQGPEGQEVIPEPNLSV- 131

Query: 214  YPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHEAIK 393
             P R  RG P K+Y+P LK++S YP+ NYVS+H+L+K   + + ++S+V IP  + +A++
Sbjct: 132  LPSRSTRGKPPKKYEPSLKAKSTYPVANYVSTHRLSKSYESFVHQISSVSIPNKVQDALR 191

Query: 394  DPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLVAKG 573
            DP+W KA+ +EM+ALQ++ TW+++  P+GKK VGC+W++T+K DA+G + RYKARLVAKG
Sbjct: 192  DPKWSKAMEEEMEALQKNNTWELIGLPKGKKTVGCKWVYTIKHDADGSVSRYKARLVAKG 251

Query: 574  YTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMDPPP 753
            +TQ YGVDY +TFAPVAKINTIR+L+S+AAN DWPL Q DVKNAFL+G L EEVYM  PP
Sbjct: 252  FTQTYGVDYDETFAPVAKINTIRVLLSLAANLDWPLKQLDVKNAFLHGDLAEEVYMSLPP 311

Query: 754  GI---NCGDKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHGEKTT 924
            G    N  D VC+LKK+LYGLKQSPRAWFGRF+  MK  GYKQS++DHTLF+K    K T
Sbjct: 312  GYETTNKTDVVCRLKKSLYGLKQSPRAWFGRFTQAMKRFGYKQSNSDHTLFLKHQKGKVT 371

Query: 925  ALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMCQRKY 1104
             LI+YVDDMV+TG+D +EI+RLQ  LA+EFE+KDLG LRYFLGIEVAR    I +CQRKY
Sbjct: 372  VLIIYVDDMVITGDDREEIRRLQQQLASEFEMKDLGDLRYFLGIEVARGSSSIFLCQRKY 431

Query: 1105 VLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPDIAYA 1284
            VLDLL+ETGMLDC+P +TPIE NH L     Q+P ++ RYQ+LVGKLIYL HTRPD+AYA
Sbjct: 432  VLDLLSETGMLDCRPADTPIEQNHRLAEYPDQVPTDRARYQRLVGKLIYLGHTRPDLAYA 491

Query: 1285 VSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGDKSDGK 1464
            VSVVS+FMH P++DHM+AV RILRYLK  PGKGL+F K     V GYTD DWAG  +D +
Sbjct: 492  VSVVSQFMHNPSEDHMEAVVRILRYLKRAPGKGLMFSKHHYLEVSGYTDADWAGCITDRR 551

Query: 1465 STSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIKVKEP 1644
            STSGYFT+V GNLVTW+SKKQKVVARSSAEAE+RGM HGVCELLW++ +LRDLG K K  
Sbjct: 552  STSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLWLRNLLRDLGFKPKRA 611

Query: 1645 MNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADMLTKA 1824
            M L+CDN+AA++I++NPVQHDRTKHVE+DRHFIK+ L+   I  PFV +EEQLAD+LTK 
Sbjct: 612  MELFCDNKAAIEISHNPVQHDRTKHVEVDRHFIKEKLDANLIAFPFVPTEEQLADVLTKG 671

Query: 1825 VCRNTFHSSLDKLGMTNIHSP 1887
            V    FH SLDKLG+ ++++P
Sbjct: 672  VSVKAFHDSLDKLGIRDVYAP 692


>gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1350

 Score =  801 bits (2070), Expect = 0.0
 Identities = 385/633 (60%), Positives = 497/633 (78%), Gaps = 10/633 (1%)
 Frame = +1

Query: 19   TEVDNDNGNR---DEETDEDVNSPQDSTSDPIPTTVEPDP---NPSQGSSSTPISVTPDL 180
            +E+  ++GN+    E    D++SP  ST+   P   E DP   N         ++  P+ 
Sbjct: 719  SEMAAEHGNQLPTPESAVRDISSP--STTPSTPMLPEDDPEVINNPVFECHDNVNSMPNT 776

Query: 181  VVTQEEAIEA-RYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELST 357
             +   + I   + P RKNRG PK QY+P+ K+++KYPI+NY+SSH+L+K   + +  LS 
Sbjct: 777  EIESSDIIGVHKLPFRKNRGQPKVQYEPDPKAKAKYPISNYMSSHRLSKSYASFVFHLSA 836

Query: 358  VVIPKNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGK 537
            ++IP  + +A+ +P+W KA+ DEM+ALQ++ TW++V +P GK+ VGCRWI+T+K  A+G 
Sbjct: 837  IIIPNKVQDALSNPKWTKAMEDEMEALQKNHTWELVPKPAGKRAVGCRWIYTLKYAADGT 896

Query: 538  IERYKARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNG 717
            ++RYKARLVAKGYTQ YG+DY +TFAPVAK+NT+R+L+S+AAN DWPL QFDVKNAFL+G
Sbjct: 897  LDRYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHG 956

Query: 718  TLEEEVYMDPPPGINCGDK---VCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADH 888
             L+EEVYMD PPG +   +   VCKLKK+LYGLKQSPRAWFGRFS  MK  GYKQS++DH
Sbjct: 957  DLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDH 1016

Query: 889  TLFVKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVAR 1068
            TLF+K   +K TALI+YVDDM+VTGNDP+E+K+L+  L++ FE+KDLG L+YFLGIEVAR
Sbjct: 1017 TLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVAR 1076

Query: 1069 SRRGITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLI 1248
            S+ GI + QRKYV+DLL ETG+L C+P +TP+E NH L     Q+P NKERYQ+LVGKLI
Sbjct: 1077 SKEGIALSQRKYVVDLLIETGLLACRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLI 1136

Query: 1249 YLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYT 1428
            YL+HTRPDIAYAVSVVS+FMHAP++DHM+AV+RILRYLK  PGKG++F K +   + GYT
Sbjct: 1137 YLSHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYT 1196

Query: 1429 DGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKR 1608
            D DWAG  +D +STSGYFT+V GNLVTWRSKKQKVVARSSAEAE+RGM HGVCE+LW++ 
Sbjct: 1197 DADWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRH 1256

Query: 1609 ILRDLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVN 1788
            +++DLG K K  MNLYCDN+AA+ IA+NPVQHDRTKHVE+DRHFIK+ LE +TI +P V 
Sbjct: 1257 LMKDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVR 1316

Query: 1789 SEEQLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            +E+QLAD+LTKAV    FHSSLDKLGM +I+SP
Sbjct: 1317 TEDQLADILTKAVSGKVFHSSLDKLGMRDIYSP 1349


>gb|PRQ43270.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 684

 Score =  773 bits (1995), Expect = 0.0
 Identities = 373/612 (60%), Positives = 475/612 (77%), Gaps = 7/612 (1%)
 Frame = +1

Query: 73   NSPQDSTSDPIPTTVEPDPNPS-QGSSSTPISVTPDLVVTQEEAIEARY--PVRKNRGVP 243
            N  +D+T   +P T+   P+P   G+      V P    +  E+   +Y  P R  RG  
Sbjct: 75   NDVEDTT---VPPTIASTPDPQLPGTEDHSFEVCPPTSTSSNESNVGQYVLPNRITRGQS 131

Query: 244  KKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHEAIKDPRWRKAVND 423
             K+Y+P L ++SKYP+ NY+S+ +L+K   + + ++S V +P  + +A+ DP+WRKA+ +
Sbjct: 132  AKRYEPTLTAKSKYPVANYMSTRRLSKSYESFVNQISAVSVPNKVQDALGDPKWRKAMEE 191

Query: 424  EMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLVAKGYTQKYGVDYG 603
            EM+ALQ+S TW +V  PQGKK VGCRW+FTVK +A+G + RYKARLVAKG+TQ YG+DY 
Sbjct: 192  EMEALQKSNTWQLVPPPQGKKAVGCRWVFTVKHNADGSVNRYKARLVAKGFTQTYGIDYD 251

Query: 604  DTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMDPPPGI---NCGDK 774
            +TFAPVAK+NTIR+L+S AAN +WPL QFDVKNAFL+G L EEVYM  PPG    + GD 
Sbjct: 252  ETFAPVAKMNTIRVLLSFAANLNWPLRQFDVKNAFLHGELTEEVYMSLPPGYVAASPGDF 311

Query: 775  VCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHGEKTTALIVYVDDMV 954
            VCKL+K+LYGLKQSPRAWFGRFS FM+ VGYKQS++DHTLF+K    K TALI+YVDDMV
Sbjct: 312  VCKLRKSLYGLKQSPRAWFGRFSQFMRKVGYKQSNSDHTLFLKHQQGKVTALIIYVDDMV 371

Query: 955  VTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMCQRKYVLDLLAETGM 1134
            +TGND  E+ RLQ  LA+EFE+KDLG+L+YFLGIEVAR R GI +CQRKYVLDLL ETG+
Sbjct: 372  ITGNDTVEMDRLQRQLASEFEMKDLGELKYFLGIEVARGREGIYLCQRKYVLDLLTETGL 431

Query: 1135 LDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPDIAYAVSVVSRFMHA 1314
            LDC+P++TPIE NH L     Q+P ++  YQ+LVG+LIYLAHTRPDIAYAVSVVS+FMH 
Sbjct: 432  LDCRPIDTPIEQNHCLAEYPDQVPTDRACYQRLVGRLIYLAHTRPDIAYAVSVVSQFMHN 491

Query: 1315 PNKDHMKAVYRILRYLKACPGKGLLFKKGDS-QGVHGYTDGDWAGDKSDGKSTSGYFTYV 1491
            P++ HM AV RIL+YLK+ PG+G+LF K ++   V G+TD DWAG+ +D +STSGYFT+V
Sbjct: 492  PSESHMDAVMRILKYLKSAPGRGVLFSKHNNILEVCGFTDADWAGNITDRRSTSGYFTFV 551

Query: 1492 WGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIKVKEPMNLYCDNQA 1671
             GNLVTW+SKKQKVVARSSAEAE+RGM HGVCELLW++ +LRDLG K++  M LYCDN+A
Sbjct: 552  GGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLWLRNLLRDLGFKLESTMQLYCDNKA 611

Query: 1672 AVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADMLTKAVCRNTFHSS 1851
            A+ I+ NPVQHDRTKHVE+DRHFIK+ L+ K I  PFV +EEQLAD+LTK V R  F+ S
Sbjct: 612  AIDISQNPVQHDRTKHVEVDRHFIKEKLDAKIISFPFVPTEEQLADILTKGVSRKAFYDS 671

Query: 1852 LDKLGMTNIHSP 1887
            L KLGM ++++P
Sbjct: 672  LSKLGMVDVYAP 683


>gb|KYP39692.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1082

 Score =  787 bits (2032), Expect = 0.0
 Identities = 384/630 (60%), Positives = 485/630 (76%), Gaps = 7/630 (1%)
 Frame = +1

Query: 19   TEVDNDNGNRDEETDEDVNSPQDSTSDPIPTTVEPDPNPSQG---SSSTPISVTPDLVVT 189
            T++ N +     ET      P+    D   T +EP    +     +SSTP S       +
Sbjct: 459  TDLVNASHPPQNETPSLPYIPESHVMDSSETHLEPTTEVTSVPVVNSSTPTS-------S 511

Query: 190  QEEAIEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIP 369
                I+ R   R+N+G+PK  Y+P+ + + KYPI++YVSSH+L++     +++LS V IP
Sbjct: 512  NTHNIQIRRSERQNKGIPKPVYEPDPRVKVKYPISSYVSSHRLSESYALTVDQLSIVSIP 571

Query: 370  KNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERY 549
             ++ EA++DPRW++A+N EM+ALQ++ TW + S P GKK +GC+W++TVKL A+G I++Y
Sbjct: 572  NSVQEALEDPRWKQAMNIEMEALQKNETWKLTSLPSGKKTIGCKWVYTVKLKADGSIDKY 631

Query: 550  KARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEE 729
            KARLVAKGYTQKYGVDY DTFAPVAK+NTIRIL+SIAAN+DWPL QFDVKNAFLNG LEE
Sbjct: 632  KARLVAKGYTQKYGVDYQDTFAPVAKLNTIRILISIAANRDWPLKQFDVKNAFLNGDLEE 691

Query: 730  EVYMDPPPGINCGDK----VCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLF 897
            EVYM+ PPG+         VCKLKKALYGLKQSPRAWFGR +  MK  GYKQS++DHTLF
Sbjct: 692  EVYMEVPPGVQLAPSKESVVCKLKKALYGLKQSPRAWFGRLTLAMKKFGYKQSNSDHTLF 751

Query: 898  VKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRR 1077
            +K    K   LIVYVDDMV+TG+D +E+K L+  LA EFE+KDLGQL+YFLGIE+ARS +
Sbjct: 752  IKHTKGKVAILIVYVDDMVLTGDDVEEMKLLEKRLAAEFEMKDLGQLKYFLGIEIARSEQ 811

Query: 1078 GITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLA 1257
            GI++ QRKYVLDLL+ETGML C+P +TPIE+NH L I   QI  +K RYQ+LVGKLIYL+
Sbjct: 812  GISLSQRKYVLDLLSETGMLACKPADTPIEMNHSLAIYPDQIETDKHRYQRLVGKLIYLS 871

Query: 1258 HTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGD 1437
            HTRPDIAY+VS+VSRFMH+P+++HM  VYRIL+YLK  PGKGLLF K D   + GYTD D
Sbjct: 872  HTRPDIAYSVSIVSRFMHSPSEEHMTTVYRILKYLKGSPGKGLLFSKNDRACIKGYTDSD 931

Query: 1438 WAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILR 1617
            WAGDK+  +STSGYFT+V GNLVTWRSKKQKVVARSSA+AEFRGM +G+CELLWI+ IL 
Sbjct: 932  WAGDKTTRQSTSGYFTFVEGNLVTWRSKKQKVVARSSAKAEFRGMAYGICELLWIRSILA 991

Query: 1618 DLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEE 1797
            DLGIK ++PMNL+CDN+A V+IA+NPVQHDRTKHVE+DRHFIK+ L+   I+ P+V SE+
Sbjct: 992  DLGIKYEQPMNLFCDNKAVVEIAHNPVQHDRTKHVEVDRHFIKEKLDNHVIQTPYVRSED 1051

Query: 1798 QLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            QL D+LTKAV    F   ++KLGM +IH+P
Sbjct: 1052 QLVDVLTKAVSGRVFEEVINKLGMIDIHAP 1081


>gb|KYP39694.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1323

 Score =  790 bits (2041), Expect = 0.0
 Identities = 376/591 (63%), Positives = 474/591 (80%), Gaps = 4/591 (0%)
 Frame = +1

Query: 127  PNPSQGSSSTPISVTPDLVVTQEEAIEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVS 306
            P P   + ++P+++           +    P R+N+G+PK  Y+P+ + + KYPI++YVS
Sbjct: 732  PLPMTPTPTSPLTMDSPPNQNPSPEVFTNLPERQNKGIPKPVYEPDPRVKVKYPISSYVS 791

Query: 307  SHKLAKPQRTMIEELSTVVIPKNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKK 486
            SH+L++     +++LS V IP ++ EA++DPRW++A+N EM+ALQ++ TW + S P GKK
Sbjct: 792  SHRLSESYALTVDQLSIVSIPNSVQEALEDPRWKQAMNIEMEALQKNETWKLTSLPSGKK 851

Query: 487  MVGCRWIFTVKLDAEGKIERYKARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAAN 666
             +GC+W++TVKL A+G I++YKARLVAKGYTQKYGVDY DTFAPVAK+NTIRIL+SIAAN
Sbjct: 852  TIGCKWVYTVKLKADGSIDKYKARLVAKGYTQKYGVDYQDTFAPVAKLNTIRILISIAAN 911

Query: 667  KDWPLHQFDVKNAFLNGTLEEEVYMDPPPGINCGDK----VCKLKKALYGLKQSPRAWFG 834
            +DWPL QFDVKNAFLNG LEEEVYM+ PPG+         VCKLKKALYGLKQSPRAWFG
Sbjct: 912  RDWPLKQFDVKNAFLNGDLEEEVYMEVPPGVQLAPSKESVVCKLKKALYGLKQSPRAWFG 971

Query: 835  RFSNFMKTVGYKQSDADHTLFVKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEF 1014
            R +  MK  GYKQS++DHTLF+K    K   LIVYVDDMV+TG+D +E+K L+  LA EF
Sbjct: 972  RLTLAMKKFGYKQSNSDHTLFIKHTKGKVAILIVYVDDMVLTGDDVEEMKLLEKRLAAEF 1031

Query: 1015 ELKDLGQLRYFLGIEVARSRRGITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQT 1194
            E+KDLGQL+YFLGIE+ARS +GI + QRKYVLDLL+ETGML C+P +TPIE+NH L I  
Sbjct: 1032 EMKDLGQLKYFLGIEIARSEQGIFLSQRKYVLDLLSETGMLACKPADTPIEMNHSLAIYP 1091

Query: 1195 SQIPANKERYQKLVGKLIYLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACP 1374
             QI  +K RYQ+LVGKLIYL+HTRPDIAY+VS+VSRFMH+P+++HM AVYRIL+YLK  P
Sbjct: 1092 DQIETDKHRYQRLVGKLIYLSHTRPDIAYSVSIVSRFMHSPSEEHMTAVYRILKYLKGSP 1151

Query: 1375 GKGLLFKKGDSQGVHGYTDGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAE 1554
            GKGLLF K D   + GYTD DWAGDK+  +STSGYFT+V GNLVTWRSKKQKVVARSSAE
Sbjct: 1152 GKGLLFSKNDRACIEGYTDSDWAGDKTTRQSTSGYFTFVEGNLVTWRSKKQKVVARSSAE 1211

Query: 1555 AEFRGMVHGVCELLWIKRILRDLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDR 1734
            AEFRGM +G+CELLWI+ IL DLGIK ++PMNL+CDN+AAV+IA+NPVQHDRTKHVE+DR
Sbjct: 1212 AEFRGMAYGICELLWIRSILADLGIKYEQPMNLFCDNKAAVEIAHNPVQHDRTKHVEVDR 1271

Query: 1735 HFIKDHLEKKTIKLPFVNSEEQLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            HFIK+ L+ + I+ P+V SE+QLAD+LTKAV    F   ++KLGM +IH+P
Sbjct: 1272 HFIKEKLDNQVIQTPYVRSEDQLADVLTKAVSGRVFEEVINKLGMIDIHAP 1322


>gb|PNX71168.1| beta-galactosidase [Trifolium pratense]
          Length = 667

 Score =  764 bits (1972), Expect = 0.0
 Identities = 383/627 (61%), Positives = 470/627 (74%), Gaps = 2/627 (0%)
 Frame = +1

Query: 13   DITEVDNDNGNRDEETDEDVNSPQDSTSDPIPTTVEPDPNPSQGSSSTPISVTPDLVVTQ 192
            D +EV  D    D   DE V+   DS  D +   + P  + +          TP+   T+
Sbjct: 52   DSSEVTLDPFPTDRSIDE-VDLVSDSEIDSVLNEINPCLHDTTN--------TPN---TE 99

Query: 193  EEAIEARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPK 372
               I+   P R NRG P  +Y+P+L+S+ KYPI+NYVSSHKL++   + + +LS++ IP 
Sbjct: 100  STNIQYNLPPRSNRGKPPVRYEPDLQSKVKYPISNYVSSHKLSRSYASFVSQLSSISIPS 159

Query: 373  NIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYK 552
            N+ EA+ DP+W +A+ +EM AL+++ TWD+V+ P+GKK VGCRW+FT+K  A+G I+RYK
Sbjct: 160  NVQEALADPKWTEAMAEEMTALEKNNTWDLVTLPRGKKTVGCRWVFTIKHKADGTIDRYK 219

Query: 553  ARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEE 732
            ARLVAKGYTQ YGVDY +TFAPVAK+NT+RIL+S+AAN+DWPL QFDVKNAFL+G + EE
Sbjct: 220  ARLVAKGYTQSYGVDYQETFAPVAKLNTVRILLSVAANQDWPLLQFDVKNAFLHGEILEE 279

Query: 733  VYMDPPPGI--NCGDKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKI 906
            +YMD PPG+  + G KVCKLKKALYGLKQSPRAWFGRF+  MKT GYK S++DHTLF+K 
Sbjct: 280  IYMDTPPGMVDSNGSKVCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKASNSDHTLFLKK 339

Query: 907  HGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGIT 1086
               K TALI+YVDDM+VTGND DEI  LQ  L +EFE+K LG L+YFLGIEVARS+ GI 
Sbjct: 340  GEGKITALIIYVDDMIVTGNDQDEISSLQKYLTSEFEMKQLGDLKYFLGIEVARSKHGIF 399

Query: 1087 MCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTR 1266
            +CQRKY LDLL+ETG+L  +P ETPIE NH L    +    +K RYQ LVGKLIYL+HTR
Sbjct: 400  LCQRKYTLDLLSETGLLASKPAETPIEQNHKLFHCLNSNITDKGRYQSLVGKLIYLSHTR 459

Query: 1267 PDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAG 1446
            PDI YAV+VVS+FMH P K HM AV RILRYLK+ PGKG+LF       V GYTD DWAG
Sbjct: 460  PDITYAVNVVSQFMHDPRKPHMDAVERILRYLKSTPGKGILFSNNGHLRVEGYTDADWAG 519

Query: 1447 DKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLG 1626
               D +STSGYFT+V GNLVTWRSKKQ VVARSSAEAEFRGM  G+CELLW+K +L DL 
Sbjct: 520  SADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEAEFRGMALGMCELLWVKSVLSDLD 579

Query: 1627 IKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLA 1806
             + KE M+L+CDN +A++IA+NPVQHDRTKHVEIDRHFIK+ LE  TI  PFV SE+QLA
Sbjct: 580  FEPKEAMSLHCDNTSAIEIAHNPVQHDRTKHVEIDRHFIKEKLEAGTIVFPFVRSEQQLA 639

Query: 1807 DMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            DMLTK V    F+ SL KLGM +IH+P
Sbjct: 640  DMLTKGVASKVFNESLLKLGMCDIHAP 666


>gb|PRQ41895.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 791

 Score =  759 bits (1961), Expect = 0.0
 Identities = 364/602 (60%), Positives = 470/602 (78%), Gaps = 7/602 (1%)
 Frame = +1

Query: 103  IPTTVEPDPNPS-QGSSSTPISVTPDLVVTQEEAIEARY--PVRKNRGVPKKQYQPELKS 273
            +P T+   P+P   G+      V P    +  E+   +Y  P R  RG   K+Y+P + +
Sbjct: 189  VPPTIASTPDPQLPGTEDHSFEVCPPTRTSSNESNVGQYVLPNRITRGQSAKRYEPTITA 248

Query: 274  RSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHEAIKDPRWRKAVNDEMDALQRSGT 453
            +SKYP+ NY+S+ +L+K   + + ++S V +P  + +A+ DP+WRKA+ +EM+ALQ+S T
Sbjct: 249  KSKYPVANYMSTRRLSKSYESFVNQISAVSVPNKVQDALGDPKWRKAMEEEMEALQKSNT 308

Query: 454  WDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLVAKGYTQKYGVDYGDTFAPVAKIN 633
            W +V  PQGKK VGCRW+F+VK +A+G + RYKARLVAKG+TQ YG+DY +TFAPVAK+N
Sbjct: 309  WQLVPPPQGKKAVGCRWVFSVKHNADGSVNRYKARLVAKGFTQTYGIDYDETFAPVAKMN 368

Query: 634  TIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMDPPPGI---NCGDKVCKLKKALYG 804
            TIR+L+S AA+ +WPL QFDVKNAFL+G L EEVYM  PPG    + GD VCKLKK+LYG
Sbjct: 369  TIRVLLSFAASLNWPLRQFDVKNAFLHGELTEEVYMSLPPGYVAASPGDFVCKLKKSLYG 428

Query: 805  LKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHGEKTTALIVYVDDMVVTGNDPDEIK 984
            LKQSPRAWFGRFS FM+ VGYKQS++DHTLF+K    K TALI+YVDDMV+TGN+  E+ 
Sbjct: 429  LKQSPRAWFGRFSQFMRKVGYKQSNSDHTLFLKHQQGKVTALIIYVDDMVITGNNTVEMD 488

Query: 985  RLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMCQRKYVLDLLAETGMLDCQPVETPI 1164
            RLQ  LA+EFE+KDLG+L+YFLGIEVAR R GI +CQRKYVLDLL +TG+LDC+P++TPI
Sbjct: 489  RLQRQLASEFEMKDLGELKYFLGIEVARGREGIYLCQRKYVLDLLTKTGLLDCRPIDTPI 548

Query: 1165 EVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVY 1344
            E NH L     Q+P ++  YQ+LVG+LIYLAHTRPDIAYAVSVVS+FMH P++ HM AV 
Sbjct: 549  EQNHCLAEYPDQVPTDRACYQRLVGRLIYLAHTRPDIAYAVSVVSQFMHNPSESHMDAVM 608

Query: 1345 RILRYLKACPGKGLLFKKGDS-QGVHGYTDGDWAGDKSDGKSTSGYFTYVWGNLVTWRSK 1521
            RIL+YLK+ PG+G+LF K ++   V G+T+ DWAG+ ++ +STSGYFT+V GNLVTW+SK
Sbjct: 609  RILKYLKSAPGRGVLFSKHNNILEVCGFTNADWAGNITNRRSTSGYFTFVGGNLVTWKSK 668

Query: 1522 KQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIKVKEPMNLYCDNQAAVKIANNPVQ 1701
            KQKVVARSSAEAE+RGM HGVCELLW++ +LRDLG K++  M LYCDN+AA+ I+ NPVQ
Sbjct: 669  KQKVVARSSAEAEYRGMAHGVCELLWLRNLLRDLGFKLESTMPLYCDNKAAIDISQNPVQ 728

Query: 1702 HDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADMLTKAVCRNTFHSSLDKLGMTNIH 1881
            HDRTKHVE+DRHFIK+ L+ K I  PFV +EEQLAD+LTK V R  F+ SL KLGM +++
Sbjct: 729  HDRTKHVEVDRHFIKEKLDAKIISFPFVPTEEQLADILTKGVSRKAFYDSLSKLGMVDVY 788

Query: 1882 SP 1887
            +P
Sbjct: 789  AP 790


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  773 bits (1997), Expect = 0.0
 Identities = 377/623 (60%), Positives = 481/623 (77%), Gaps = 3/623 (0%)
 Frame = +1

Query: 28   DNDNGNRDEETDEDVNSPQDSTSDPIPTTVEPDPNPSQGSSSTPISVTPDLVVTQEEAIE 207
            DN   + D   +    SP  S   P  ++ E  PN S  +SS+     P  ++       
Sbjct: 567  DNVLQSSDGVLNNSSVSPSHSAVSPAQSSPEVCPNLSLSNSSSVSGSVPTKIL------- 619

Query: 208  ARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHEA 387
               P R  RG P K Y+P L +++KYP+  YVS+H+L+KP    + +LS+V +P  + +A
Sbjct: 620  ---PSRSTRGQPPKHYEPTLSAKAKYPVAKYVSTHRLSKPYAAFVNQLSSVSLPSKVQDA 676

Query: 388  IKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLVA 567
            +KD +W KA+  EMDAL+++ TW++VS PQGKK VGCRW++TVK +++G ++RYKARLVA
Sbjct: 677  MKDEKWMKAMTVEMDALEKNCTWELVSLPQGKKTVGCRWVYTVKHNSDGSVDRYKARLVA 736

Query: 568  KGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMDP 747
            KGYTQKYGVDY +TFAPVAKINTIR+L+S+AAN DWPL QFDVKNAFL+G L EEVYMD 
Sbjct: 737  KGYTQKYGVDYDETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAFLHGDLHEEVYMDL 796

Query: 748  PPGI--NCGDKV-CKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHGEK 918
            PPG   + G++V CKLKK+LYGLKQSPRAWFGRF+ FMK +GY+QS++DHTLF+K    K
Sbjct: 797  PPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKIGYRQSNSDHTLFLKHRCGK 856

Query: 919  TTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMCQR 1098
             TALI+YVDDMVVTG+D +EI+RLQ  L++EFE+KDLG L+YFLGIEVAR +  I + QR
Sbjct: 857  VTALIIYVDDMVVTGDDIEEIQRLQGQLSSEFEMKDLGNLKYFLGIEVARGKDCIVLSQR 916

Query: 1099 KYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPDIA 1278
            KYVLDLLAETGMLDC+PV TPIE NH L     Q+P NK RYQ+LVG+LIYL+HTRPD+A
Sbjct: 917  KYVLDLLAETGMLDCKPVATPIEQNHQLAEYLDQVPTNKGRYQRLVGRLIYLSHTRPDLA 976

Query: 1279 YAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGDKSD 1458
            YAVSVVS+FMH P++ HM AV+RIL+YLK+ PGKGL+F K     V GYTD DWAG  +D
Sbjct: 977  YAVSVVSQFMHNPSEAHMDAVFRILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAGSITD 1036

Query: 1459 GKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIKVK 1638
             +STSGYFT+V GNLVTW+SKKQKVVARSSAEAE+RGM  G+CE+LW++ +L DLG + K
Sbjct: 1037 RRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMARGLCEMLWLRNLLNDLGFRQK 1096

Query: 1639 EPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADMLT 1818
            + M LYCDN+AA++IA+NPVQHDRTKHVE+DRHFIK+ L+ + I  PFV +EEQLAD+LT
Sbjct: 1097 KAMPLYCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKEKLDGQIILFPFVPTEEQLADILT 1156

Query: 1819 KAVCRNTFHSSLDKLGMTNIHSP 1887
            KA+    F+ SLDKLG+ ++++P
Sbjct: 1157 KALSTKAFYDSLDKLGICDLYAP 1179


>gb|PRQ56213.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1005

 Score =  767 bits (1980), Expect = 0.0
 Identities = 373/633 (58%), Positives = 480/633 (75%), Gaps = 9/633 (1%)
 Frame = +1

Query: 16   ITEVDNDNGNRDEETDEDVNSPQDSTSDP-IPTTVEPDPNPS-QGSSSTPISVTPDLVVT 189
            ++  +ND  +        V+  ++   D  +P T+   P+P   G+      V P  + +
Sbjct: 372  VSMAENDVTDTTPNIQAPVSMAENDVEDTTVPPTITSTPDPQLPGTEDHSCEVCPPTITS 431

Query: 190  QEEAIEARY--PVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVV 363
              E+   +Y  P R  RG   K Y+P L ++SKYP+ NY+S+ +L+K   + + ++S V 
Sbjct: 432  SNESNVGQYVLPNRTTRGQSAKIYEPTLTAKSKYPVANYMSTRRLSKSYESFVNQISAVS 491

Query: 364  IPKNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIE 543
            +P  + +A+ DP WRKA+ +E++ALQ+S TW +V  PQGKK VGCRW+FTVK +A+G + 
Sbjct: 492  VPNKVQDALGDPNWRKAMEEELEALQKSNTWQLVPPPQGKKAVGCRWVFTVKHNADGSVI 551

Query: 544  RYKARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTL 723
            RYKARLVAKG+TQ YG+DY +TFAPVAK+ TIR+L+SIAA+ +WPL QFDVKNAFL+G L
Sbjct: 552  RYKARLVAKGFTQTYGIDYDETFAPVAKMTTIRVLLSIAASLNWPLRQFDVKNAFLHGEL 611

Query: 724  -EEEVYMDPPPGI---NCGDKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHT 891
             EEEVYM  PPG    + GD VC+L+K+LYGLKQSP AWFGRFS FM+ VGY+Q+++DHT
Sbjct: 612  AEEEVYMSLPPGYVVDSPGDFVCRLRKSLYGLKQSPHAWFGRFSQFMRKVGYRQNNSDHT 671

Query: 892  LFVKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARS 1071
            LF+K    K TALI+YVDDMV+TGND  EI RLQ  LA+EFE+KDLG+L+YFLGIEVAR 
Sbjct: 672  LFLKHQQGKVTALIIYVDDMVITGNDTVEIDRLQRQLASEFEMKDLGELKYFLGIEVARG 731

Query: 1072 RRGITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIY 1251
            R GI +CQRKYVLDLL ETG+LDC+PV+TPIE NH L     Q+PA++ RYQ+LVG+LIY
Sbjct: 732  REGIYLCQRKYVLDLLTETGLLDCRPVDTPIEQNHCLAEYPDQVPADRARYQRLVGRLIY 791

Query: 1252 LAHTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKK-GDSQGVHGYT 1428
            LAHTRPD+AYAVSVVS+FMH P++ HM AV RIL+YLK+ PG+G+LF K  +   V G+T
Sbjct: 792  LAHTRPDVAYAVSVVSQFMHNPSESHMDAVMRILKYLKSAPGRGVLFSKHSNILEVCGFT 851

Query: 1429 DGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKR 1608
            D DWAG+ +D +STSGYFT+V GNLVTW+SKKQKVVARSSAEAE+RGM HGVCELLW++ 
Sbjct: 852  DADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLWLRN 911

Query: 1609 ILRDLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVN 1788
            +LRDLG K+K  M LYCDN+AA+ I+ NPVQHDRTKHVE+DRHFIK+ L+ K I  PFV 
Sbjct: 912  LLRDLGFKLKSTMQLYCDNKAAIDISQNPVQHDRTKHVEVDRHFIKEKLDAKIISFPFVP 971

Query: 1789 SEEQLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            +EEQLAD+LTK V R  F+ SL KLGM +++ P
Sbjct: 972  TEEQLADVLTKGVSRKAFYDSLSKLGMVDVYEP 1004


>gb|PRQ49627.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 947

 Score =  764 bits (1974), Expect = 0.0
 Identities = 371/627 (59%), Positives = 476/627 (75%), Gaps = 12/627 (1%)
 Frame = +1

Query: 43   NRDEETDEDVNSP-----QDSTSDPIPTTVEPDPNPS-QGSSSTPISVTPDLVVTQEEAI 204
            N  E+T  ++ +P      D     +P T+   P+P   G+      V P    +  E+ 
Sbjct: 320  NDVEDTTPNIQAPVSMAENDVEDTTVPPTIASTPDPLLPGTEDHSFEVCPPTSTSSNEST 379

Query: 205  EARY--PVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNI 378
              +Y  P R  RG   K+Y+P L ++SKYP+ NY+S+ +L+K   + + ++S V +P  +
Sbjct: 380  VGQYVLPNRTTRGQSVKRYEPTLTAKSKYPVANYMSTRRLSKSYESFMNQISAVSVPNKV 439

Query: 379  HEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKAR 558
             +A+ DP+WRKA+ +EM+ALQ+S TW +V  PQGKK VGCRW+FTVK +A+G + RYKAR
Sbjct: 440  QDALGDPKWRKAMEEEMEALQKSNTWQLVPPPQGKKAVGCRWVFTVKHNADGSVNRYKAR 499

Query: 559  LVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVY 738
            LVAKG+TQ YG+DY +TFAPVAK+NTIR+L+S AA+ +WPL QFDVKNAFL+G L EEVY
Sbjct: 500  LVAKGFTQTYGIDYDETFAPVAKMNTIRVLLSFAASLNWPLRQFDVKNAFLHGELAEEVY 559

Query: 739  MDPPPGI---NCGDKVCKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIH 909
            M  P G    + GD VC+L+K+LYGLKQSPRAWFGRFS FM+ VGY+QS++DHTLF+K  
Sbjct: 560  MSLPLGYVVASPGDFVCRLRKSLYGLKQSPRAWFGRFSQFMRKVGYRQSNSDHTLFLKHQ 619

Query: 910  GEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITM 1089
              K TALI+YVDDM++TGND  EI RLQ  LA EFE+KDLG+L+YFLGIEVAR R GI +
Sbjct: 620  QGKVTALIIYVDDMIITGNDTVEIDRLQRQLAFEFEMKDLGELKYFLGIEVARGREGIYL 679

Query: 1090 CQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRP 1269
            CQRKYVLDLL +TG+LDC+PV+TPIE NH L     Q+P ++ RYQ+LVG+LIYLAHTRP
Sbjct: 680  CQRKYVLDLLTKTGLLDCRPVDTPIEQNHCLAEYPDQVPTDRARYQRLVGRLIYLAHTRP 739

Query: 1270 DIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDS-QGVHGYTDGDWAG 1446
            D+AYAVSVVS+FMH P++ HM AV RIL+YLK+ PG G+LF K ++   V G+TD DWAG
Sbjct: 740  DVAYAVSVVSQFMHNPSESHMDAVMRILKYLKSAPGMGVLFSKHNNILDVCGFTDADWAG 799

Query: 1447 DKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLG 1626
            + +D +STSGYFT+V GNLVTW+SKKQKVVARSSAEAE+RGM  GVCELLW++ +LRDLG
Sbjct: 800  NITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAQGVCELLWLRNLLRDLG 859

Query: 1627 IKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLA 1806
             K+K  M LYCDN+AA+ I+ NPVQHDRTKHVE+DRHFIK+ L+ K I  PFV +EEQLA
Sbjct: 860  FKLKSTMQLYCDNKAAIDISQNPVQHDRTKHVEVDRHFIKEKLDAKIISFPFVPTEEQLA 919

Query: 1807 DMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            D+LTK V R  F+ SL KLGM ++++P
Sbjct: 920  DVLTKGVSRKAFYDSLSKLGMVDVYAP 946


>gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1127

 Score =  770 bits (1989), Expect = 0.0
 Identities = 375/623 (60%), Positives = 482/623 (77%), Gaps = 3/623 (0%)
 Frame = +1

Query: 28   DNDNGNRDEETDEDVNSPQDSTSDPIPTTVEPDPNPSQGSSSTPISVTPDLVVTQEEAIE 207
            DN   + D   +    SP  S   P  ++ E  PN S  +SS+     P  ++       
Sbjct: 514  DNVLQSSDGVLNNSSFSPSPSAVSPAQSSPEVCPNLSLSNSSSVSGSVPTKIL------- 566

Query: 208  ARYPVRKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRTMIEELSTVVIPKNIHEA 387
               P R  RG P K Y+P L +++KYP+  YVS+H+L+KP    + +LS+V +P  + +A
Sbjct: 567  ---PSRSTRGQPPKHYEPTLSAKAKYPVAKYVSTHRLSKPYAAFVNQLSSVSLPSKVQDA 623

Query: 388  IKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTVKLDAEGKIERYKARLVA 567
            +KD +W KA+  EMDAL+++ TW++VS P GKK VGCRW++TVK +++G ++RYKARLVA
Sbjct: 624  MKDEKWMKAMTVEMDALEKNCTWELVSLPPGKKTVGCRWVYTVKHNSDGSVDRYKARLVA 683

Query: 568  KGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDVKNAFLNGTLEEEVYMDP 747
            KGYTQKYGVDY +TFAPVAKINTIR+L+S+AAN DWPL QFDVKNAFL+G L EEVYMD 
Sbjct: 684  KGYTQKYGVDYDETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAFLHGDLHEEVYMDL 743

Query: 748  PPGI--NCGDKV-CKLKKALYGLKQSPRAWFGRFSNFMKTVGYKQSDADHTLFVKIHGEK 918
            PPG   + G++V CKLKK+LYGLKQSPRAWFGRF+ FMK +GY+QS++DHTLF+K    K
Sbjct: 744  PPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKIGYRQSNSDHTLFLKHRCGK 803

Query: 919  TTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYFLGIEVARSRRGITMCQR 1098
             TALI+YVDDMVVTG+D +EI+RLQ  L++EFE+KDLG L+YFLGIEVAR +  I + QR
Sbjct: 804  VTALIIYVDDMVVTGDDIEEIQRLQGQLSSEFEMKDLGNLKYFLGIEVARGKDCIVLSQR 863

Query: 1099 KYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQKLVGKLIYLAHTRPDIA 1278
            KYVLDLLAETGMLDC+PV TPIE NH L     Q+P NK RYQ+LVG+LIYL+HTRPD+A
Sbjct: 864  KYVLDLLAETGMLDCKPVATPIEQNHQLAEYLDQVPTNKGRYQRLVGRLIYLSHTRPDLA 923

Query: 1279 YAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDSQGVHGYTDGDWAGDKSD 1458
            YAVSVVS+FMH P++ HM AV+RIL+YLK+ PGKGL+F K     V GYTD DWAG+ +D
Sbjct: 924  YAVSVVSQFMHNPSEAHMDAVFRILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAGNITD 983

Query: 1459 GKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVCELLWIKRILRDLGIKVK 1638
             +STSGYFT++ GNLVTW+SKKQKVVARSSAEAE+RGM  G+CE+LW++ +L DLG + K
Sbjct: 984  RRSTSGYFTFLGGNLVTWKSKKQKVVARSSAEAEYRGMGRGLCEMLWLRNLLNDLGFRQK 1043

Query: 1639 EPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKTIKLPFVNSEEQLADMLT 1818
            + M+LYCDN+AA++IA+NPVQHDRTKHVE+DRHFIK+ L+ + I  PFV +EEQLAD+LT
Sbjct: 1044 KAMSLYCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKEKLDGQIILFPFVPTEEQLADILT 1103

Query: 1819 KAVCRNTFHSSLDKLGMTNIHSP 1887
            KA+    F+ SLDKLG+ ++++P
Sbjct: 1104 KALSTKAFYDSLDKLGIRDLYAP 1126


>gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1231

 Score =  770 bits (1989), Expect = 0.0
 Identities = 378/640 (59%), Positives = 486/640 (75%), Gaps = 27/640 (4%)
 Frame = +1

Query: 49   DEETDEDVNSP------QDSTSDPIP-------------TTVEPDPNPSQGSSSTPISVT 171
            D+   E V+ P      Q S  DP+              ++V P P+    + S+P  V 
Sbjct: 592  DQSAGEIVSDPVSDNVLQSSDGDPVSDNVLQSSDGVLNNSSVSPSPSAVSPAQSSP-EVC 650

Query: 172  PDLVVTQEEAIEARYPV-----RKNRGVPKKQYQPELKSRSKYPINNYVSSHKLAKPQRT 336
            P+L ++   ++    P      R  RG P K Y+P L +++KYP+  YVS+H+L+KP   
Sbjct: 651  PNLSLSNSSSVSGSVPTKILPSRSTRGQPPKHYEPTLSAKAKYPVAKYVSTHRLSKPYAA 710

Query: 337  MIEELSTVVIPKNIHEAIKDPRWRKAVNDEMDALQRSGTWDVVSRPQGKKMVGCRWIFTV 516
             + +LS+V +P  + +A+KD +W KA+  EMDAL+++ TW++VS P GKK VGCRW++TV
Sbjct: 711  FVNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEKNCTWELVSLPPGKKTVGCRWVYTV 770

Query: 517  KLDAEGKIERYKARLVAKGYTQKYGVDYGDTFAPVAKINTIRILVSIAANKDWPLHQFDV 696
            K +++G ++RYKARLVAKGYTQKYGVDY +TFAPVAKINTIR+L+S+AAN DWPL QFDV
Sbjct: 771  KHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKINTIRVLLSLAANLDWPLQQFDV 830

Query: 697  KNAFLNGTLEEEVYMDPPPGI--NCGDKV-CKLKKALYGLKQSPRAWFGRFSNFMKTVGY 867
            KNAFL+G L EEVYMD PPG   + G++V CKLKK+LYGLKQSPRAWFGRF+ FMK +GY
Sbjct: 831  KNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKIGY 890

Query: 868  KQSDADHTLFVKIHGEKTTALIVYVDDMVVTGNDPDEIKRLQTVLATEFELKDLGQLRYF 1047
            +QS++DHTLF+K    K TALI+YVDDMVVTG+D +EI+RLQ  L++EFE+KDLG L+YF
Sbjct: 891  RQSNSDHTLFLKHRCGKVTALIIYVDDMVVTGDDIEEIQRLQGQLSSEFEMKDLGNLKYF 950

Query: 1048 LGIEVARSRRGITMCQRKYVLDLLAETGMLDCQPVETPIEVNHGLTIQTSQIPANKERYQ 1227
            LGIEVAR +  I + QRKYVLDLLAETGMLDC+PV TPIE NH L     Q+P NK RYQ
Sbjct: 951  LGIEVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIEQNHQLAEYLDQVPTNKGRYQ 1010

Query: 1228 KLVGKLIYLAHTRPDIAYAVSVVSRFMHAPNKDHMKAVYRILRYLKACPGKGLLFKKGDS 1407
            +LVG+LIYL+HTRPD+AYAVSVVS+FMH P++ HM AV+RIL+YLK+ PGKGL+F K   
Sbjct: 1011 RLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFRILQYLKSAPGKGLIFSKYSH 1070

Query: 1408 QGVHGYTDGDWAGDKSDGKSTSGYFTYVWGNLVTWRSKKQKVVARSSAEAEFRGMVHGVC 1587
              V GYTD DWAG  +D +STSGYFT+V GNLVTW+SKKQKVVARSSAEAE+RGM  G+C
Sbjct: 1071 LDVSGYTDADWAGSITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMARGLC 1130

Query: 1588 ELLWIKRILRDLGIKVKEPMNLYCDNQAAVKIANNPVQHDRTKHVEIDRHFIKDHLEKKT 1767
            E+LW++ +L DLG   K+ M LYCDN+AA++IA+NPVQHDRTKHVE+DRHFIK+ L+ + 
Sbjct: 1131 EMLWLRNLLNDLGFGQKKAMPLYCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKEKLDGQI 1190

Query: 1768 IKLPFVNSEEQLADMLTKAVCRNTFHSSLDKLGMTNIHSP 1887
            I  PFV +EEQLAD+LTKA+    F+ SLDKLG+ ++++P
Sbjct: 1191 ILFPFVPTEEQLADILTKALSTKAFYDSLDKLGIRDLYAP 1230