BLASTX nr result

ID: Chrysanthemum21_contig00048198 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048198
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY99274.1| hypothetical protein LSAT_5X162761 [Lactuca sativa]     61   3e-09
gb|PLY99277.1| hypothetical protein LSAT_5X162780 [Lactuca sativa]     57   4e-08
gb|PLY76068.1| hypothetical protein LSAT_9X27701 [Lactuca sativa]      55   2e-07
gb|PLY76079.1| hypothetical protein LSAT_9X27720 [Lactuca sativa]      52   2e-06
gb|KVH94738.1| hypothetical protein Ccrd_003204 [Cynara carduncu...    52   2e-06

>gb|PLY99274.1| hypothetical protein LSAT_5X162761 [Lactuca sativa]
          Length = 122

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -3

Query: 342 EMAQVSFVRKVSMXXXXXXXXXXXXXXXXXXXXS-PDAGAAFSIPASGVMIGSSLLLSFV 166
           EMAQV+ V+K+SM                      PDAGAAFS+P SGVMIG+SLLLSFV
Sbjct: 58  EMAQVNIVKKLSMLAVVAVVLSAASSVSAQAPAPSPDAGAAFSLPTSGVMIGTSLLLSFV 117

Query: 165 AIFRN 151
           AIFRN
Sbjct: 118 AIFRN 122


>gb|PLY99277.1| hypothetical protein LSAT_5X162780 [Lactuca sativa]
          Length = 65

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -3

Query: 339 MAQVSFVRKVSMXXXXXXXXXXXXXXXXXXXXSPD--AGAAFSIPASGVMIGSSLLLSFV 166
           MAQVS V+K S+                    +P   AGAAFS+PASGVMIG+SLLLSFV
Sbjct: 1   MAQVSMVKKASVLAIVAVAISAATVSAQELAPAPSPLAGAAFSLPASGVMIGTSLLLSFV 60

Query: 165 AIFRN 151
           A+FRN
Sbjct: 61  ALFRN 65


>gb|PLY76068.1| hypothetical protein LSAT_9X27701 [Lactuca sativa]
          Length = 64

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 339 MAQVSFVRKVS-MXXXXXXXXXXXXXXXXXXXXSPDAGAAFSIPASGVMIGSSLLLSFVA 163
           MAQ+S V+K S +                    SPDAGAAFS+PASGVMIG+SL+LSFVA
Sbjct: 1   MAQLSIVKKASVLVVVALSAVATVSAQAMAPAPSPDAGAAFSLPASGVMIGTSLVLSFVA 60

Query: 162 IFRN 151
           + RN
Sbjct: 61  LLRN 64


>gb|PLY76079.1| hypothetical protein LSAT_9X27720 [Lactuca sativa]
          Length = 65

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -3

Query: 240 PDAGAAFSIPASGVMIGSSLLLSFVAIFRN 151
           PDAGAAFS+P SGV+IGSS+LLS VA+FRN
Sbjct: 36  PDAGAAFSVPISGVVIGSSMLLSLVALFRN 65


>gb|KVH94738.1| hypothetical protein Ccrd_003204 [Cynara cardunculus var. scolymus]
          Length = 66

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
 Frame = -3

Query: 339 MAQVSFVRK---VSMXXXXXXXXXXXXXXXXXXXXSPDAGAAFSIPASGVMIGSSLLLSF 169
           MAQ+S V+K   V++                    SPDAGAAFS+PA+G MIG+SLLLSF
Sbjct: 1   MAQLSIVKKASVVALVALSAAATVSAQELAMAPAPSPDAGAAFSVPATGFMIGTSLLLSF 60

Query: 168 VAIFRN 151
           VA  RN
Sbjct: 61  VAFLRN 66


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