BLASTX nr result

ID: Chrysanthemum21_contig00048085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048085
         (508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY87930.1| hypothetical protein LSAT_4X21600 [Lactuca sativa]     154   5e-45

>gb|PLY87930.1| hypothetical protein LSAT_4X21600 [Lactuca sativa]
          Length = 139

 Score =  154 bits (388), Expect = 5e-45
 Identities = 69/107 (64%), Positives = 87/107 (81%)
 Frame = -3

Query: 506 LRELLQGMDDDNMDQTSTTETMANDVLPVKEKNGDSFHFLSDYESQLGFDEDKQIQDFDY 327
           LRELL+ ++DDN+ QTS  ET+ ND+ P KE+NGD FH L D ESQL F +DKQIQDFDY
Sbjct: 32  LRELLEEINDDNVGQTSMIETVLNDMPPSKEENGDFFHVLPDNESQLLFYQDKQIQDFDY 91

Query: 326 WVSHEMAEMPCSFPGLPFDNEMMPFWHVENRAEYNLIDDIAYIELWE 186
           W++ ++AEMPCSFPGL F+NEMMPFW++ENR +  ++DDI Y ELWE
Sbjct: 92  WITQQIAEMPCSFPGLWFENEMMPFWNMENRVDEMMVDDIVYFELWE 138


Top