BLASTX nr result

ID: Chrysanthemum21_contig00048057 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048057
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95489.1| Pathogenic type III effector avirulence factor Av...    54   1e-06

>gb|KVH95489.1| Pathogenic type III effector avirulence factor Avr cleavage
           site-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 91

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = -3

Query: 429 NAHYKDDESVSLNTTQKRRHHHNCHEQSSMIKSNSLLCCFFP 304
           N   K +E  SL    +RRHHHNCH+Q S +KSN  L CFFP
Sbjct: 46  NLQLKANEIDSLKIKHQRRHHHNCHKQPSFVKSNPFLRCFFP 87


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