BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00047117
         (539 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF94842.1| putative zinc finger, CCHC-type [Helianthus annuus]    257   6e-77
ref|XP_019172809.1| PREDICTED: uncharacterized protein LOC109168...   193   4e-56
ref|XP_019161889.1| PREDICTED: uncharacterized protein LOC109158...   174   2e-48
ref|XP_022032803.1| uncharacterized protein LOC110933911 [Helian...   168   2e-47
gb|AAC02672.1| polyprotein, partial [Arabidopsis arenosa]             163   4e-43
emb|CDY58610.1| BnaCnng33390D [Brassica napus]                        162   6e-43
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     162   7e-43
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     162   7e-43
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     162   7e-43
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              161   1e-42
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   160   3e-42
gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]       160   3e-42
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    157   3e-41
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                    155   1e-40
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]                    155   1e-40
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]                    155   1e-40
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]                    155   1e-40
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] >gi|404433798...   155   2e-40
sp|Q9ZT94.1|POLR2_ARATH RecName: Full=Retrovirus-related Pol pol...   155   2e-40
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    155   2e-40

>gb|OTF94842.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 990

 Score =  257 bits (656), Expect = 6e-77
 Identities = 126/179 (70%), Positives = 143/179 (79%)
 Frame = +2

Query: 2   SEFGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNN 181
           SE+GGPDEIVLGNG  L ISH GH+S+PT SRSL LQNVL VP+LRN LISVAKLCK+N 
Sbjct: 303 SEYGGPDEIVLGNGNTLSISHIGHSSIPTSSRSLLLQNVLLVPKLRNRLISVAKLCKTNQ 362

Query: 182 VSVEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHK 361
           VSVEFFP HFLVKDL TGAHLMRGVNVNDVYYA  N      Q++S+ K+  S++SWHH 
Sbjct: 363 VSVEFFPFHFLVKDLRTGAHLMRGVNVNDVYYATSNPPHPPIQVHSSIKTPTSLLSWHHI 422

Query: 362 LGHPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
            GHPSI+VLK LL +LG+  N      FHCDACS+NKSHK+PFGENSF  SKPLELVY+
Sbjct: 423 FGHPSIQVLKRLLNKLGLVYNNTSASSFHCDACSLNKSHKLPFGENSFIASKPLELVYT 481


>ref|XP_019172809.1| PREDICTED: uncharacterized protein LOC109168224 [Ipomoea nil]
          Length = 503

 Score =  193 bits (491), Expect = 4e-56
 Identities = 99/179 (55%), Positives = 126/179 (70%)
 Frame = +2

Query: 2   SEFGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNN 181
           SE+GGPDEI L +G  L I+HTG T  PT +R L+L NVL VP+LR NL+SV+KLC+SN 
Sbjct: 321 SEYGGPDEIHLADGNRLKITHTGTTVFPTPTRDLSLNNVLCVPKLRRNLVSVSKLCQSNG 380

Query: 182 VSVEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHK 361
           VSVEFFP+ F VKDL TGA LM+G N++DVY A   ++ C PQIN+ T S  S+  WHH+
Sbjct: 381 VSVEFFPNSFHVKDLRTGACLMQGNNMHDVYSA---TMSCEPQINTITLS--SVNEWHHR 435

Query: 362 LGHPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           LGHPS KVL  + +             FH D+CS+NKSHK+PF EN+   +KPLEL+Y+
Sbjct: 436 LGHPSNKVLGVISRNSNYPFKSFDVSTFHFDSCSVNKSHKLPFAENTLNNTKPLELLYT 494


>ref|XP_019161889.1| PREDICTED: uncharacterized protein LOC109158431 [Ipomoea nil]
          Length = 536

 Score =  174 bits (440), Expect = 2e-48
 Identities = 88/179 (49%), Positives = 122/179 (68%)
 Frame = +2

Query: 2   SEFGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNN 181
           +++ GPDEI+LG+G  L ISHTG  SLP++SRS++L +VL VP  +NNLISV+KLCK+N+
Sbjct: 340 ADYTGPDEIILGDGNSLRISHTGSVSLPSNSRSISLSDVLCVPSFQNNLISVSKLCKTNS 399

Query: 182 VSVEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHK 361
           VS EFF +HF VKD   GA L++G  VNDVY   +       QIN TT S  S+  WHH+
Sbjct: 400 VSDEFFDTHFAVKDRQLGAPLVQGPVVNDVYSLPVQQ----SQINVTTMS--SLSKWHHQ 453

Query: 362 LGHPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
            GHP+ KVL  +L+   +S        F C++C INKSHK+PF  ++   ++PL+L+Y+
Sbjct: 454 FGHPNSKVLACILRHNNVSFKPEQLKEFSCNSCHINKSHKLPFSFSTMSSTRPLQLIYT 512


>ref|XP_022032803.1| uncharacterized protein LOC110933911 [Helianthus annuus]
          Length = 396

 Score =  168 bits (426), Expect = 2e-47
 Identities = 86/136 (63%), Positives = 104/136 (76%)
 Frame = +2

Query: 2   SEFGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNN 181
           S++GGPDEIVLG+G C PISHTG T +PT +  L+L NVL VP LR NL+SVAKLCK+N 
Sbjct: 238 SDYGGPDEIVLGDGTCPPISHTGETHIPTSTCPLSLSNVLCVPNLRKNLVSVAKLCKTNQ 297

Query: 182 VSVEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHK 361
           VSVEFFPS+F+VKDL TGAHLM GVN +DVYYA  +     PQIN  T ST S++  HH+
Sbjct: 298 VSVEFFPSYFIVKDLRTGAHLMWGVNNHDVYYAPSS---LYPQIN--TISTKSLLELHHQ 352

Query: 362 LGHPSIKVLKFLLKQL 409
            GHPS+K+LK + K L
Sbjct: 353 FGHPSVKILKTIGKTL 368


>gb|AAC02672.1| polyprotein, partial [Arabidopsis arenosa]
          Length = 1390

 Score =  163 bits (412), Expect = 4e-43
 Identities = 80/177 (45%), Positives = 115/177 (64%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+ + +G  LPISH+G   LPT +RSL+L++VL+VP ++ NLISV ++C +N VS
Sbjct: 356 YNGGEEVTIADGSGLPISHSGSALLPTPTRSLDLKDVLYVPDIQKNLISVYRMCNTNGVS 415

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL TGA L++G   N++Y   +NS        S T  T  + SWH +LG
Sbjct: 416 VEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKT-DLPSWHARLG 474

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +LK L+ +  +  +    +   C  CSINKSHK+PF  N+   S PLE +Y+
Sbjct: 475 HPSLPILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYT 531


>emb|CDY58610.1| BnaCnng33390D [Brassica napus]
          Length = 856

 Score =  162 bits (410), Expect = 6e-43
 Identities = 84/177 (47%), Positives = 112/177 (63%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+V+ +G  LPISHTG +SL T SRSL L N+LFVP L  NLISV +LC +N VS
Sbjct: 135 YNGGEEVVIADGSGLPISHTGSSSLTTPSRSLALNNILFVPNLHKNLISVYRLCNTNKVS 194

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL TGA L++G   +++Y   + + R +    S +  T ++ SWH +LG
Sbjct: 195 VEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVQTTRSISLFASPSPKT-TLSSWHARLG 253

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS  VL+ L+    +  +        C  C INKSHK+PF  N+    KPLE VYS
Sbjct: 254 HPSNTVLQTLVSHFSLPLSTTSHKQSPCSHCLINKSHKLPFYSNTIHSQKPLEYVYS 310


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  162 bits (410), Expect = 7e-43
 Identities = 80/177 (45%), Positives = 114/177 (64%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+ + +G  LPISH+G   LPT +RSL L++VL+VP ++ NLISV ++C +N VS
Sbjct: 356 YNGDEEVTIADGSGLPISHSGSALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVS 415

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL TGA L++G   N++Y   +NS        S T  T  + SWH +LG
Sbjct: 416 VEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKT-DLPSWHARLG 474

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +LK L+ +  +  +    +   C  CSINKSHK+PF  N+   S PLE +Y+
Sbjct: 475 HPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYT 531


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  162 bits (410), Expect = 7e-43
 Identities = 80/177 (45%), Positives = 114/177 (64%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+ + +G  LPISH+G   LPT +RSL L++VL+VP ++ NLISV ++C +N VS
Sbjct: 356 YNGDEEVTIADGSGLPISHSGSALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVS 415

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL TGA L++G   N++Y   +NS        S T  T  + SWH +LG
Sbjct: 416 VEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKT-DLPSWHARLG 474

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +LK L+ +  +  +    +   C  CSINKSHK+PF  N+   S PLE +Y+
Sbjct: 475 HPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYT 531


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  162 bits (410), Expect = 7e-43
 Identities = 80/177 (45%), Positives = 114/177 (64%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+ + +G  LPISH+G   LPT +RSL L++VL+VP ++ NLISV ++C +N VS
Sbjct: 356 YNGDEEVTIADGSGLPISHSGSALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVS 415

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL TGA L++G   N++Y   +NS        S T  T  + SWH +LG
Sbjct: 416 VEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKT-DLPSWHARLG 474

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +LK L+ +  +  +    +   C  CSINKSHK+PF  N+   S PLE +Y+
Sbjct: 475 HPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYT 531


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  161 bits (408), Expect = 1e-42
 Identities = 84/177 (47%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+ + +G  LPI+HTG ++L T SRSL L N+L+VP L  NLISV KLC +N VS
Sbjct: 447 YNGGEEVTIADGSTLPITHTGSSTLSTQSRSLALNNILYVPNLHKNLISVYKLCNANKVS 506

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL TGA L++G   +++Y   + S   +    S T  T ++ SWH +LG
Sbjct: 507 VEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVPSNTPISLFASPTPKT-TLPSWHSRLG 565

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS  VLK L+ Q  +  +      F C  C INKSHK+PF  N+     PLE VYS
Sbjct: 566 HPSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTIISYTPLEYVYS 622


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  160 bits (406), Expect = 3e-42
 Identities = 84/184 (45%), Positives = 121/184 (65%), Gaps = 7/184 (3%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + GPD+I+LG+G  L I+HTG + LP  S+S  L NVL  P ++ NLISV+K CK+NN S
Sbjct: 334 YEGPDDILLGDGSGLEITHTGSSKLPATSKSFCLSNVLCXPSIKQNLISVSKFCKTNNTS 393

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYY----AAINSLRCLPQINSTTKSTASIISWH 355
           +EFFPS F++KDL TGA L +G + +DVY        N+L   P+    +  T S+ +WH
Sbjct: 394 IEFFPSSFVIKDLKTGARLTQGRSKDDVYEWPWPNKGNTLGTSPKQACVSVKT-SLANWH 452

Query: 356 HKLGHPSIKVLKFLLKQLGISPNKMPTDLFH---CDACSINKSHKMPFGENSFKVSKPLE 526
           H+LGHPS ++ +FL+++  +     PT+ FH   C++C  NKSHK+PFG +S +    L+
Sbjct: 453 HRLGHPSSRIFQFLIRKHNL--QIYPTESFHNFFCESCLCNKSHKLPFGVSSLRSRGXLD 510

Query: 527 LVYS 538
           LVYS
Sbjct: 511 LVYS 514


>gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1192

 Score =  160 bits (405), Expect = 3e-42
 Identities = 80/180 (44%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
 Frame = +2

Query: 2   SEFGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNN 181
           +++GGP+EI++G+G  L I+HTG  +L T  + L L +VL VP+++ +LISV+K C++N+
Sbjct: 337 TDYGGPEEILVGDGSGLKIAHTGSVTLTTAPKPLILSDVLHVPKMQRDLISVSKFCRTND 396

Query: 182 VSVEFFPSHFLVKDLHTGAHLMRGVNVNDVY-YAAINSLRCLPQINSTTKSTASIISWHH 358
           VSV FFP H LVKDL TGA L++G N ND+Y      SL    +  +     +SI  WH 
Sbjct: 397 VSVHFFPYHLLVKDLSTGAPLVKGHNKNDLYELPKTTSLATAKKTFAFITQKSSIDVWHR 456

Query: 359 KLGHPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           +LGHPS ++L F+L   G+S + +   +  C++C  NKSH++PF ++S   S+PLEL+YS
Sbjct: 457 RLGHPSSRILNFMLNSFGLSFD-VSNKITDCNSCLCNKSHQLPFNDSSLSSSRPLELLYS 515


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  157 bits (398), Expect = 3e-41
 Identities = 79/178 (44%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G +E+ + +G  LPISHTG   LPT SRSL L+++L+VP +  NLISV +LC +N VS
Sbjct: 337 YTGGEEVTIADGSGLPISHTGSALLPTPSRSLALKDILYVPNVSKNLISVYRLCNANQVS 396

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+HF VKDL+TGA L++G   N++Y   +N  + +  + ++      + SWH +LG
Sbjct: 397 VEFFPAHFQVKDLNTGARLLQGRTRNELYEWPVNQ-KSITILTASPSPKTDLSSWHQRLG 455

Query: 368 HPSIKVLKFLLKQLGIS-PNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HP++ +LK ++    +   N +P  L  C  CSINKSHK+PF  N+   S+PLE +Y+
Sbjct: 456 HPALPILKDVVSHFHLPLSNTIPKQL-PCSDCSINKSHKLPFFTNTIVSSQPLEYLYT 512


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  155 bits (393), Expect = 1e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 352 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVS 411

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 412 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHCSWHSRLG 470

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 527


>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  155 bits (393), Expect = 1e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 352 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVS 411

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 412 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHCSWHSRLG 470

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 527


>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  155 bits (393), Expect = 1e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 352 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVS 411

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 412 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHCSWHSRLG 470

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 527


>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  155 bits (393), Expect = 1e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 352 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVS 411

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 412 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHCSWHSRLG 470

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 527


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana]
 dbj|BAM44533.1| polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  155 bits (392), Expect = 2e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 207 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVS 266

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 267 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHSSWHSRLG 325

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 326 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 382


>sp|Q9ZT94.1|POLR2_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon
           RE2; AltName: Full=Retro element 2; Short=AtRE2;
           Includes: RecName: Full=Protease RE2; Includes: RecName:
           Full=Reverse transcriptase RE2; Includes: RecName:
           Full=Endonuclease RE2
 gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
 emb|CAB77781.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
          Length = 1456

 Score =  155 bits (392), Expect = 2e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 333 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVS 392

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 393 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHSSWHSRLG 451

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 452 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 508


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  155 bits (392), Expect = 2e-40
 Identities = 78/177 (44%), Positives = 111/177 (62%)
 Frame = +2

Query: 8   FGGPDEIVLGNGKCLPISHTGHTSLPTHSRSLNLQNVLFVPQLRNNLISVAKLCKSNNVS 187
           + G D++++ +G  +PI+HTG  SLPT SRSL+L  VL+VP +  NLISV +LC +N VS
Sbjct: 352 YTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNINKNLISVYRLCNTNRVS 411

Query: 188 VEFFPSHFLVKDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTASIISWHHKLG 367
           VEFFP+ F VKDL+TG  L++G   +++Y   I S + +    S   S A+  SWH +LG
Sbjct: 412 VEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPC-SKATHSSWHSRLG 470

Query: 368 HPSIKVLKFLLKQLGISPNKMPTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYS 538
           HPS+ +L  ++    +        L  C  C INKSHK+PF  ++   SKPLE +YS
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 527