BLASTX nr result

ID: Chrysanthemum21_contig00047108 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00047108
         (1025 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97007.1| hypothetical protein Ccrd_000899 [Cynara carduncu...   190   2e-54
ref|XP_023768925.1| uncharacterized protein LOC111917468 [Lactuc...   120   4e-29
ref|XP_022018180.1| transcription factor IIIB 60 kDa subunit-lik...    62   7e-07
ref|XP_023756982.1| transcription factor IIIB 60 kDa subunit-lik...    59   6e-06

>gb|KVH97007.1| hypothetical protein Ccrd_000899 [Cynara cardunculus var. scolymus]
          Length = 317

 Score =  190 bits (483), Expect = 2e-54
 Identities = 109/269 (40%), Positives = 141/269 (52%), Gaps = 60/269 (22%)
 Frame = -1

Query: 806 MNSGRAVAWCSHCGKDCDTYHDHTINITSCVDCGKVLSE--------------------- 690
           +NSGR + WCSHCGK+C+T  D+T N TSCVDCGKVL E                     
Sbjct: 51  LNSGREMTWCSHCGKNCETSRDYTTNNTSCVDCGKVLFEDIFTEEATFVTDAAGGAHLTG 110

Query: 689 ------GAYFESPRRPFQKGNVVNFEISYKKAKVWHTSRLNKVFERGDTLWCSHCVRKGG 528
                 GA FES RR  +KGNV   ++ YK  ++   S   + ++  +T+WC HC RKGG
Sbjct: 111 NFVRFGGACFESQRRTLRKGNVATNKLIYKN-RITKVSHATRHYKGRETIWCPHCARKGG 169

Query: 527 TVHEHTTASICCVDCGKILLKDVYTEKATIYRHALSRXXXXXXXXXXXXXKSMRSAQTAA 348
           T H+ TT+S+ CVDCGK+L +++YTE AT +R A                K ++  QTA+
Sbjct: 170 TAHDRTTSSVHCVDCGKVLFEEIYTENATFFRDAAG---GKDERKQALDAKHLKPVQTAS 226

Query: 347 EGVGQLHMKKIAAS----------------------CSYAFKKEPTNEDLITEDEE---- 246
           E  GQL +KK+  S                      CSYA  KEP N D  TE+++    
Sbjct: 227 EAAGQLSLKKMQRSSSKINYDVLNTLFGGNEPNPMNCSYAIGKEPMNGDDETEEDDYSET 286

Query: 245 -----DREQESCS--YVYNYDYDAGDEYD 180
                D EQESCS  Y Y+YDYDAGDE D
Sbjct: 287 EWRSYDNEQESCSYDYDYDYDYDAGDEND 315


>ref|XP_023768925.1| uncharacterized protein LOC111917468 [Lactuca sativa]
 gb|PLY98062.1| hypothetical protein LSAT_4X53460 [Lactuca sativa]
          Length = 187

 Score =  120 bits (301), Expect = 4e-29
 Identities = 74/223 (33%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
 Frame = -1

Query: 806 MNSGRAVAWCSHCGKDCDTYHDHTINITSCVDCGKVLSEGAYFESPRRPFQKGNVVNFEI 627
           + +GR +AWCSHCG+ C+T HD+  N TSC+DCGK+L E             GN+   E 
Sbjct: 3   IKAGRKMAWCSHCGRICNTSHDYPTNNTSCLDCGKILFE-------------GNLTTNES 49

Query: 626 SYKKAKVWHTSRLNKVFERGDTLWCSHCVRKGGTVHEHTTASICCVDCGKILLKDVYTEK 447
            Y   ++ H +R    ++  +T+WCSHC+RK    H+HT+  I CVDCGK+LL+D   + 
Sbjct: 50  IYNN-RISHATR---HYKGRETIWCSHCIRKSHIAHDHTSGIIQCVDCGKVLLEDKNVKN 105

Query: 446 ATIYRHALSRXXXXXXXXXXXXXKSMRSAQTAAEGVGQLHMKKIAASCSYAFKKEPTNED 267
           AT                           +     + Q   K+ ++  +Y        E 
Sbjct: 106 AT-------------------------GGKDKRPKLAQTKKKRSSSKMNYDVINTLLGEK 140

Query: 266 LITEDEE--------------DREQESCSYVYNYD--YDAGDE 186
            I   EE              D E ESCSY Y+YD  YD GDE
Sbjct: 141 PIPMKEEDECSKSDGNEWKGYDNEHESCSYDYDYDYNYDGGDE 183


>ref|XP_022018180.1| transcription factor IIIB 60 kDa subunit-like [Helianthus annuus]
          Length = 505

 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -1

Query: 557 WCSHCVRKGGTVHEHTTASICCVDCGKILLKDVYTEKATIYRHA 426
           WC HC +  GT H++TT +ICC DCGK++ +DVYTE  T  + A
Sbjct: 3   WCHHCSQNTGTYHDYTTGNICCTDCGKVVHQDVYTEDDTFVKDA 46


>ref|XP_023756982.1| transcription factor IIIB 60 kDa subunit-like isoform X1 [Lactuca
           sativa]
 ref|XP_023756983.1| transcription factor IIIB 60 kDa subunit-like isoform X1 [Lactuca
           sativa]
 gb|PLY90498.1| hypothetical protein LSAT_1X126300 [Lactuca sativa]
          Length = 576

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = -1

Query: 557 WCSHCVRKGGTVHEHTTASICCVDCGKILLKDVYTEKATIYRHA 426
           WC HC +   T  ++TT S+CCVDCGK++ +D+YTE  T  + A
Sbjct: 3   WCPHCAKNSETHRDYTTGSVCCVDCGKVVSQDLYTEDVTFVKDA 46


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