BLASTX nr result

ID: Chrysanthemum21_contig00046606 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00046606
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05372.1| Zinc finger, CCCH-type [Cynara cardunculus var. s...   122   1e-30
ref|XP_023762764.1| zinc finger CCCH domain-containing protein 1...   118   3e-29
ref|XP_022006423.1| zinc finger CCCH domain-containing protein 1...   100   4e-22
ref|XP_021976473.1| zinc finger CCCH domain-containing protein 1...    84   1e-16
gb|OTG18616.1| hypothetical protein HannXRQ_Chr08g0225001 [Helia...    54   3e-07

>gb|KVI05372.1| Zinc finger, CCCH-type [Cynara cardunculus var. scolymus]
          Length = 329

 Score =  122 bits (305), Expect = 1e-30
 Identities = 64/104 (61%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
 Frame = +3

Query: 147 MQSFSDFPYTGADDDSKLWSSFINQTDGGAYD-YEAPLYSSI-PAMTPPRHYXXXXXXXX 320
           MQ+++DFPY+G D DSKLWSSFI Q+DGG YD Y+A LYSSI P  TPP H+        
Sbjct: 1   MQNYTDFPYSG-DADSKLWSSFIEQSDGGVYDDYDASLYSSIFPTSTPPHHFSVTSNTTT 59

Query: 321 XXXXXXXXXXXMVADYSRRHSLDFAPFQDLIERRNWCLANLRLT 452
                      +V DYSRRHSLDFAPFQDLI+RRNWCL+NLRLT
Sbjct: 60  LPLPP------IVVDYSRRHSLDFAPFQDLIDRRNWCLSNLRLT 97


>ref|XP_023762764.1| zinc finger CCCH domain-containing protein 15 [Lactuca sativa]
 gb|PLY86252.1| hypothetical protein LSAT_8X42221 [Lactuca sativa]
          Length = 331

 Score =  118 bits (295), Expect = 3e-29
 Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
 Frame = +3

Query: 147 MQSFSDFPYTGADDDSKLWSSFINQTDGGAYD-YEAPLYSSI-PAMTPPRHYXXXXXXXX 320
           MQ+++ FP++G DDD+KLW+SFI Q+DG AYD ++APLYS I P  TPP H+        
Sbjct: 1   MQNYTGFPFSGDDDDNKLWTSFIEQSDGSAYDDFDAPLYSPIFPTSTPPHHFPGTPNTTP 60

Query: 321 XXXXXXXXXXXMVADYSRRHSLDFAPFQDLIERRNWCLANLRLT 452
                      +V DYS RHS+DFAPFQDLI+RRNWCL+NLRLT
Sbjct: 61  LSLPP------IVMDYSHRHSMDFAPFQDLIDRRNWCLSNLRLT 98


>ref|XP_022006423.1| zinc finger CCCH domain-containing protein 15-like [Helianthus
           annuus]
 gb|OTF99674.1| putative zinc finger CCCH domain-containing protein 9 [Helianthus
           annuus]
          Length = 334

 Score = 99.8 bits (247), Expect = 4e-22
 Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = +3

Query: 147 MQSFSDFPYTGADDDSKLWSSFINQTDGGAYD-YEAPLYSSI-PAMTPPRHYXXXXXXXX 320
           M S++DF Y+G D+DSKLWSSFI Q+  G +D ++ PLYSSI PA T P  +        
Sbjct: 1   MHSYTDFSYSG-DEDSKLWSSFIQQSSSGPFDDFQTPLYSSIFPATTSPHLFAVPEPSTL 59

Query: 321 XXXXXXXXXXXMVADYSRRHSLDFAPFQDLIERRNWCLANLRLT 452
                      +V DY+RR+S DFAPFQDLI+RRNWCL+NLRL+
Sbjct: 60  PHQQ-------IVVDYNRRNSQDFAPFQDLIDRRNWCLSNLRLS 96


>ref|XP_021976473.1| zinc finger CCCH domain-containing protein 15-like [Helianthus
           annuus]
 gb|OTG17531.1| putative zinc finger C-x8-C-x5-C-x3-H type family protein
           [Helianthus annuus]
          Length = 298

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 50/103 (48%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
 Frame = +3

Query: 147 MQSFSDFPYTGADDDSKLWSSFINQTDGGAY-DYEAPLYSSIPAMTPPRHYXXXXXXXXX 323
           MQ+++DF Y G DDDSKLWSSFI+++ GG   ++  PLYS I +MTPP            
Sbjct: 1   MQNYTDFSY-GNDDDSKLWSSFIHRSSGGVCNEFNTPLYSPIFSMTPP------------ 47

Query: 324 XXXXXXXXXXMVADYSRRHSLDFAPFQDLIERRNWCLANLRLT 452
                      VA    R+S +FAPFQDLI+RRNWCL NLRL+
Sbjct: 48  -----------VA--RMRNSPEFAPFQDLIDRRNWCLNNLRLS 77


>gb|OTG18616.1| hypothetical protein HannXRQ_Chr08g0225001 [Helianthus annuus]
          Length = 50

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +3

Query: 147 MQSFSDFPYTGADDDSKLWSSFINQTDGG-AYDYEAPLYSSIPAMTP 284
           MQ+++DF Y G D+D+KLWSSFI+Q++GG   ++  PLYSSI ++TP
Sbjct: 1   MQNYTDFSY-GNDEDNKLWSSFIHQSNGGMCNEFNTPLYSSIFSITP 46


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