BLASTX nr result

ID: Chrysanthemum21_contig00045892 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00045892
         (580 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH98440.1| Lateral Root Primordium type 1, C-terminal, parti...    78   2e-13
ref|XP_023767166.1| protein SHI RELATED SEQUENCE 5-like [Lactuca...    68   7e-10
ref|XP_022015728.1| protein SHI RELATED SEQUENCE 5-like isoform ...    63   3e-08
ref|XP_022015721.1| protein SHI RELATED SEQUENCE 5-like isoform ...    63   3e-08

>gb|KVH98440.1| Lateral Root Primordium type 1, C-terminal, partial [Cynara
           cardunculus var. scolymus]
          Length = 415

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
 Frame = +1

Query: 106 MSGFFSLGGGNYNITKDDTXXXXXXXXXXXXXETHEESIITPNSLYLFKNNEDIYNKGFD 285
           MSGFFSLGGG + I KDD              +  E+SIITPNSLYLFK NE+IY+KGF+
Sbjct: 1   MSGFFSLGGG-FGIGKDDEQRHDQN-------QEQEDSIITPNSLYLFK-NEEIYSKGFE 51

Query: 286 LW-----XXXXXXXXXXXXXXXXDLGVARRKHANTISDGVEDLCLXXXXXXXXXXXXXXX 450
           LW                     DLGVA R+ + T S G++DLCL               
Sbjct: 52  LWQQYYQLHQHRQQHHHQQPPHYDLGVAGRRRSGTASGGLDDLCLNSSNNNNNNNHLYSS 111

Query: 451 XWN 459
            WN
Sbjct: 112 SWN 114


>ref|XP_023767166.1| protein SHI RELATED SEQUENCE 5-like [Lactuca sativa]
 gb|PLY82971.1| hypothetical protein LSAT_1X16440 [Lactuca sativa]
          Length = 410

 Score = 67.8 bits (164), Expect = 7e-10
 Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
 Frame = +1

Query: 106 MSGFFSLGGGNYNITKDDTXXXXXXXXXXXXXETHEESIITPNSLYLFKNNEDIYNKGFD 285
           MSG FSLGGG + I KD+              +  E+SIITPNSLYLFK NEDIY+KGF+
Sbjct: 1   MSGLFSLGGG-FGIGKDEEEQQHDHHN-----QEQEDSIITPNSLYLFK-NEDIYSKGFE 53

Query: 286 LW-----XXXXXXXXXXXXXXXXDL----GVARRKHANTISDGVEDLCL 405
           LW                     DL    G   R+ ++T S GV+DLCL
Sbjct: 54  LWQQYYQLHQHRQQNHHQQPPHYDLSVGGGCTGRRRSSTASGGVDDLCL 102


>ref|XP_022015728.1| protein SHI RELATED SEQUENCE 5-like isoform X2 [Helianthus annuus]
          Length = 393

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
 Frame = +1

Query: 106 MSGFFSLGGGNYNITKDDTXXXXXXXXXXXXXETHEESIITPNSLYLFKNNEDIYNKGFD 285
           MSGFFSLGG  + I+  D              E  E+S+ITPNSLYLFK NE+IYNKGF+
Sbjct: 1   MSGFFSLGGA-FGISSKDNQEHVENQNQNQEQE-QEDSVITPNSLYLFK-NEEIYNKGFE 57

Query: 286 LW----XXXXXXXXXXXXXXXXDLG-----VARRKHANTISDGVEDLCL 405
           LW                    DLG     V  R+  + I  GVED+CL
Sbjct: 58  LWQQYYQLHQHRLQQSPAPSHYDLGGTGGCVGSRRKVSAI--GVEDICL 104


>ref|XP_022015721.1| protein SHI RELATED SEQUENCE 5-like isoform X1 [Helianthus annuus]
 gb|OTG33936.1| putative SHI-related sequence 5 [Helianthus annuus]
          Length = 395

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
 Frame = +1

Query: 106 MSGFFSLGGGNYNITKDDTXXXXXXXXXXXXXETHEESIITPNSLYLFKNNEDIYNKGFD 285
           MSGFFSLGG  + I+  D              E  E+S+ITPNSLYLFK NE+IYNKGF+
Sbjct: 1   MSGFFSLGGA-FGISSKDNQEHVENQNQNQEQE-QEDSVITPNSLYLFK-NEEIYNKGFE 57

Query: 286 LW----XXXXXXXXXXXXXXXXDLG-----VARRKHANTISDGVEDLCL 405
           LW                    DLG     V  R+  + I  GVED+CL
Sbjct: 58  LWQQYYQLHQHRLQQSPAPSHYDLGGTGGCVGSRRKVSAI--GVEDICL 104


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