BLASTX nr result

ID: Chrysanthemum21_contig00045636 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00045636
         (393 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06724.1| Armadillo-like helical [Cynara cardunculus var. s...    50   9e-07

>gb|KVI06724.1| Armadillo-like helical [Cynara cardunculus var. scolymus]
          Length = 418

 Score = 50.1 bits (118), Expect(2) = 9e-07
 Identities = 32/85 (37%), Positives = 44/85 (51%)
 Frame = -1

Query: 393 QCLNSVKKGSSKEIDLASHVVGMXXXXXXLCN*YLVVELGL*MVLYLYRITGSNYWLGEK 214
           QCLNS+K+GS+KEI LA+H +G+                       L    GS    GEK
Sbjct: 95  QCLNSIKRGSAKEIALAAHAIGL-----------------------LALTAGS----GEK 127

Query: 213 ATEIFEDLVTPISKAPKYCFDQTKL 139
           A EI E+ + PIS+A K C + +K+
Sbjct: 128 AKEILEESIFPISEALKSCSEVSKM 152



 Score = 30.4 bits (67), Expect(2) = 9e-07
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 44  LLEGLAVIAFVGGN 3
           LLEGLAVIAFVGGN
Sbjct: 155 LLEGLAVIAFVGGN 168


Top