BLASTX nr result

ID: Chrysanthemum21_contig00045509 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00045509
         (592 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH92076.1| Membrane transporter, Tim44-related/Ribosomal pro...   101   1e-21

>gb|KVH92076.1| Membrane transporter, Tim44-related/Ribosomal protein L45 [Cynara
           cardunculus var. scolymus]
          Length = 522

 Score =  101 bits (252), Expect = 1e-21
 Identities = 58/101 (57%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = -2

Query: 318 EDKLNPYGNLTQPNVHGMETWFGSSSCGPIERTKGETVRGELAKPKP-RKTVSINHTVEF 142
           EDK +P G    P +H            P   TKGE  R   AKPK  RKTVSINH VE+
Sbjct: 425 EDKPDPNG----PPLH------------PFGSTKGENGRDVAAKPKAARKTVSINHNVEY 468

Query: 141 IDDYLSKKKRKRKAMEQWPSMDIEDDEIKPLRSILKAGKNQ 19
           I+DY S KKRKRKAMEQWPSM+IE DE+KPL+SILK G  Q
Sbjct: 469 IEDYTSNKKRKRKAMEQWPSMEIEGDELKPLKSILKVGSKQ 509


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