BLASTX nr result

ID: Chrysanthemum21_contig00045466 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00045466
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH91599.1| hypothetical protein Ccrd_006376 [Cynara carduncu...    96   8e-20

>gb|KVH91599.1| hypothetical protein Ccrd_006376 [Cynara cardunculus var. scolymus]
          Length = 2423

 Score = 95.5 bits (236), Expect = 8e-20
 Identities = 65/138 (47%), Positives = 71/138 (51%), Gaps = 24/138 (17%)
 Frame = +1

Query: 127 DSFPGSSMLIERAQVNSGDVEEDSKTENTSSATEQISERDGFPVTXXXXXXXXXXXXXVN 306
           D  P SS+L ERAQVNSGD EED+K E TSSATEQ SE DG P               V 
Sbjct: 23  DMKPLSSILDERAQVNSGDGEEDTKMEYTSSATEQTSEPDGIPAVASVDDNSGDTNTDVY 82

Query: 307 ---------PSGPPSSDPEPTIQPNDDLMVEVRGDEGIKLPPTS---------------G 414
                      G PSSDP PTI P +D++    GD GI LP TS               G
Sbjct: 83  SDSQRFLPISDGVPSSDPAPTI-PKEDVVAGFDGDGGITLPSTSGDSEYVSLTDSVLSGG 141

Query: 415 EVNPVSLTELAKAFQLLG 468
           EV P  LT+LAK FQLLG
Sbjct: 142 EVTPAGLTQLAKVFQLLG 159


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