BLASTX nr result

ID: Chrysanthemum21_contig00045436 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00045436
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH91715.1| Arf GTPase activating protein, partial [Cynara ca...    69   2e-10
ref|XP_022002001.1| probable ADP-ribosylation factor GTPase-acti...    62   4e-08
ref|XP_023769534.1| probable ADP-ribosylation factor GTPase-acti...    59   5e-07
gb|KVH89677.1| Arf GTPase activating protein [Cynara cardunculus...    59   6e-07

>gb|KVH91715.1| Arf GTPase activating protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 359

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 36/46 (78%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = -2

Query: 159 TNGSAPVKAP-AIRAATVKKPIGSKKPGKTGGLGARKLSTKILGSI 25
           TNGSAPVKAP +IR A+VKKPIG KK GKTGGLGARKLSTK   S+
Sbjct: 227 TNGSAPVKAPPSIRTASVKKPIGGKKTGKTGGLGARKLSTKTSESL 272


>ref|XP_022002001.1| probable ADP-ribosylation factor GTPase-activating protein AGD9
           [Helianthus annuus]
 gb|OTG02528.1| putative arf GTPase activating protein [Helianthus annuus]
          Length = 403

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 159 TNGSAPVKA-PAIRAATVKKPIGSKKPGKTGGLGARKLSTKILGSI 25
           TNGSAPVK   +IR  TVKKPIG+KK GK GGLGARKLSTK   S+
Sbjct: 166 TNGSAPVKTVSSIRTTTVKKPIGAKKTGKPGGLGARKLSTKTSESL 211


>ref|XP_023769534.1| probable ADP-ribosylation factor GTPase-activating protein AGD8
           [Lactuca sativa]
 gb|PLY81091.1| hypothetical protein LSAT_6X79321 [Lactuca sativa]
          Length = 412

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
 Frame = -2

Query: 159 TNGSAPVK-APA-IRAATVKKPIG--SKKPGKTGGLGARKLSTKILGSI 25
           TNGSAPVK AP+ IRA +VKKPIG  +KK GKTGGLGARKLSTK   S+
Sbjct: 168 TNGSAPVKPAPSSIRAPSVKKPIGGGAKKTGKTGGLGARKLSTKTSESL 216


>gb|KVH89677.1| Arf GTPase activating protein [Cynara cardunculus var. scolymus]
          Length = 312

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 29/41 (70%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = -2

Query: 159 TNGSAPVKAPA-IRAATVKKPIGSKKPGKTGGLGARKLSTK 40
           TN SAPV+AP  I  +++KKP+G+KK GKTGGLGARKLSTK
Sbjct: 165 TNVSAPVRAPPKILTSSIKKPVGAKKTGKTGGLGARKLSTK 205


Top