BLASTX nr result

ID: Chrysanthemum21_contig00045153 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00045153
         (505 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00959.1| hypothetical protein Ccrd_020771 [Cynara carduncu...   125   4e-30
gb|KVH87633.1| Helicase, C-terminal [Cynara cardunculus var. sco...    69   1e-10
gb|PLY99621.1| hypothetical protein LSAT_4X55800 [Lactuca sativa]      67   7e-10
ref|XP_023739690.1| helicase-like transcription factor CHR28 [La...    67   7e-10
ref|XP_022018165.1| helicase-like transcription factor CHR28 iso...    59   4e-07
ref|XP_022018166.1| helicase-like transcription factor CHR28 iso...    57   3e-06

>gb|KVI00959.1| hypothetical protein Ccrd_020771 [Cynara cardunculus var. scolymus]
          Length = 1318

 Score =  125 bits (314), Expect = 4e-30
 Identities = 79/146 (54%), Positives = 96/146 (65%), Gaps = 5/146 (3%)
 Frame = -3

Query: 440 AYEWKFDDLDTYVHVTAXXXXXDINMDIESLLSIFYATQPANSLQNGVINPSLSIGPCSE 261
           A EW+ DD D  V +TA      ++MDIESLLSI   +QP +S +N V +PS SI PCSE
Sbjct: 9   ACEWQVDDFD--VGITADDDD--LSMDIESLLSILEESQPDDSTENRVRDPSSSITPCSE 64

Query: 260 PSSYSA-DEHFETHNDDVVGSFIFSPQDQSGASTSGTVCSGDSFESERKMVGFGFPKLDS 84
           P S++A +EHF THN    GS  FSP DQSGASTSGTVCSG SFESER+MV FG  K +S
Sbjct: 65  PFSHAAVNEHFGTHN----GSLTFSPSDQSGASTSGTVCSGGSFESERQMVNFGITKNES 120

Query: 83  LLDA----VSSPSPCERALQFLGSGS 18
             D      SS S  + A+Q  G+G+
Sbjct: 121 RPDVSSLNYSSASLGDWAIQVPGNGT 146


>gb|KVH87633.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 1346

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
 Frame = -3

Query: 440 AYEWKFDDLDTYVHVTAXXXXXDINMDIESLLSIFYATQPANSLQNGVINPSLSIGPCSE 261
           +YEW+FD +D  V +TA      ++MDIES  SI     P +  QN  ++PSLSI PC+E
Sbjct: 9   SYEWQFD-VDDDVDLTADDGA--MSMDIESFFSILEERPPDDCSQNAFVDPSLSIAPCNE 65

Query: 260 PSSY-SADEHFETHNDDVVGSFIFSPQDQSGASTSGTVCSGDSFESERKMVGFGFPKLDS 84
            + +    EH +TH+            D S AS S TVCS  S + ER+    G  K+  
Sbjct: 66  SALHIGVIEHSQTHD------------DHSEASASRTVCSSGSSDCERQTDNHGLTKVGP 113

Query: 83  LLDAVS 66
           + D  S
Sbjct: 114 MPDVSS 119


>gb|PLY99621.1| hypothetical protein LSAT_4X55800 [Lactuca sativa]
          Length = 1178

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
 Frame = -3

Query: 437 YEWKFDDLDTYVHVTAXXXXXDINMDIESLLSIFYATQPANSLQNGVINPSLSIGPCSE- 261
           +EW  DD DT +          ++MDIES LSI    +P +S Q+G+++PSLSI  C+E 
Sbjct: 8   FEWHDDD-DTELGAD----DGALSMDIESFLSILDEDRPDDSSQSGLVDPSLSIALCNES 62

Query: 260 PSSYSADEHFETHNDDVVGSFIFSPQDQSGASTSGTVCSGDSFESERKMVGFGFPKLDSL 81
            S+  A+E  + H+            D S AS S TVCS  S + ER+ V +G  K++  
Sbjct: 63  ASNVGANEQSQIHD------------DHSEASASRTVCSSGSSDCERQTVNYGLTKVEP- 109

Query: 80  LDAVSS 63
           L AVSS
Sbjct: 110 LPAVSS 115


>ref|XP_023739690.1| helicase-like transcription factor CHR28 [Lactuca sativa]
          Length = 1180

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
 Frame = -3

Query: 437 YEWKFDDLDTYVHVTAXXXXXDINMDIESLLSIFYATQPANSLQNGVINPSLSIGPCSE- 261
           +EW  DD DT +          ++MDIES LSI    +P +S Q+G+++PSLSI  C+E 
Sbjct: 10  FEWHDDD-DTELGAD----DGALSMDIESFLSILDEDRPDDSSQSGLVDPSLSIALCNES 64

Query: 260 PSSYSADEHFETHNDDVVGSFIFSPQDQSGASTSGTVCSGDSFESERKMVGFGFPKLDSL 81
            S+  A+E  + H+            D S AS S TVCS  S + ER+ V +G  K++  
Sbjct: 65  ASNVGANEQSQIHD------------DHSEASASRTVCSSGSSDCERQTVNYGLTKVEP- 111

Query: 80  LDAVSS 63
           L AVSS
Sbjct: 112 LPAVSS 117


>ref|XP_022018165.1| helicase-like transcription factor CHR28 isoform X1 [Helianthus
           annuus]
 gb|OTF92069.1| putative SNF2-related, N-terminal domain-containing protein
           [Helianthus annuus]
          Length = 1153

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 39/119 (32%), Positives = 56/119 (47%)
 Frame = -3

Query: 458 TCMMNMAYEWKFDDLDTYVHVTAXXXXXDINMDIESLLSIFYATQPANSLQNGVINPSLS 279
           T  +  +YEWKFD  D      A      ++MD++S +SI   T P +  QNG+ +PSLS
Sbjct: 3   TANVGTSYEWKFDGEDEDEGFVADDAS--MSMDMDSFMSILEETMPEDCSQNGLADPSLS 60

Query: 278 IGPCSEPSSYSADEHFETHNDDVVGSFIFSPQDQSGASTSGTVCSGDSFESERKMVGFG 102
             P +E +S +    +    D           D + AS   TVCS  S + ER+ V  G
Sbjct: 61  TAPYNESASDAGPNEYSPTLD-----------DHAEASAGRTVCSSGSSDFERQTVNHG 108


>ref|XP_022018166.1| helicase-like transcription factor CHR28 isoform X2 [Helianthus
           annuus]
          Length = 1150

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/119 (31%), Positives = 55/119 (46%)
 Frame = -3

Query: 458 TCMMNMAYEWKFDDLDTYVHVTAXXXXXDINMDIESLLSIFYATQPANSLQNGVINPSLS 279
           T  +  +YEWKFD  D      A      ++MD++S +SI   T P +  QNG+ +PSLS
Sbjct: 3   TANVGTSYEWKFDGEDEDEGFVADDAS--MSMDMDSFMSILEETMPEDCSQNGLADPSLS 60

Query: 278 IGPCSEPSSYSADEHFETHNDDVVGSFIFSPQDQSGASTSGTVCSGDSFESERKMVGFG 102
             P +E +S +    +    D+              AS   TVCS  S + ER+ V  G
Sbjct: 61  TAPYNESASDAGPNEYSPTLDE--------------ASAGRTVCSSGSSDFERQTVNHG 105


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