BLASTX nr result

ID: Chrysanthemum21_contig00044740 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00044740
         (606 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH96243.1| hypothetical protein Ccrd_001672 [Cynara carduncu...   117   8e-27
ref|XP_022011711.1| interaptin-like [Helianthus annuus] >gi|1191...   115   4e-26
ref|XP_023772257.1| neurofilament heavy polypeptide-like isoform...    97   7e-20
ref|XP_023772256.1| neurofilament heavy polypeptide-like isoform...    97   7e-20

>gb|KVH96243.1| hypothetical protein Ccrd_001672 [Cynara cardunculus var. scolymus]
          Length = 998

 Score =  117 bits (293), Expect = 8e-27
 Identities = 71/124 (57%), Positives = 79/124 (63%), Gaps = 9/124 (7%)
 Frame = -1

Query: 606  SSGSTIDGSRDFSCNS--------SDHKLQEEPRQPLRQGLRSSCKKEEATPTAKNQLEE 451
            SS S I+ S  F C S         DHK Q E R+PLRQGLRSSCKKEEAT  AKNQLE 
Sbjct: 875  SSSSIIEVSGAFPCKSLGVAKVNLPDHKHQGEQRRPLRQGLRSSCKKEEATTKAKNQLER 934

Query: 450  VTPVRRVLRSHKSVSEAAKINE-VPDHSKEQPEHSERTRSSKRKTIIPEAEPVSNLRRTR 274
             TPVRR LR  K+ SEA  + E  P+ SKEQ +HS R R SKRK  I EAE  S  ++TR
Sbjct: 935  ATPVRRSLRPRKTTSEATVVIENGPNRSKEQLKHSRRARPSKRKPGIAEAEQASKSQKTR 994

Query: 273  RTGL 262
            RT L
Sbjct: 995  RTDL 998


>ref|XP_022011711.1| interaptin-like [Helianthus annuus]
 gb|OTF94873.1| putative winged helix-turn-helix DNA-binding domain-containing
            protein [Helianthus annuus]
          Length = 821

 Score =  115 bits (288), Expect = 4e-26
 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
 Frame = -1

Query: 606  SSGSTIDGSRDFSCNSSDHKLQEEPRQPLRQGLRSSCKKEEATPTA--KNQLEEVTPVRR 433
            SSGST +GSR                + LRQGLRSS KKEEA P +  K Q E VTPVRR
Sbjct: 721  SSGSTSEGSR----------------RTLRQGLRSSSKKEEAAPKSGSKKQPELVTPVRR 764

Query: 432  VLRSHKSVSEAAKINEVPDHSKEQPEHSERTRSSKRKTIIPEAEPVSNLRRTRRTGL 262
             LRS+K++S+AA + EV DHSKEQ  H  RTRSSKRKT I EAE VSN R+TRRTGL
Sbjct: 765  SLRSNKTISDAAVVTEVADHSKEQVTHLGRTRSSKRKTEIAEAEQVSNTRKTRRTGL 821


>ref|XP_023772257.1| neurofilament heavy polypeptide-like isoform X2 [Lactuca sativa]
 ref|XP_023772258.1| neurofilament heavy polypeptide-like isoform X2 [Lactuca sativa]
          Length = 917

 Score = 97.4 bits (241), Expect = 7e-20
 Identities = 53/89 (59%), Positives = 66/89 (74%)
 Frame = -1

Query: 537  EPRQPLRQGLRSSCKKEEATPTAKNQLEEVTPVRRVLRSHKSVSEAAKINEVPDHSKEQP 358
            E ++P+RQGLRSS KK+E TP  K + E+V PVRR LRS+ +++EA  INE PD SKEQ 
Sbjct: 830  EKKRPVRQGLRSSIKKQETTPIPKKKEEQVVPVRRSLRSNNTIAEA--INEEPDSSKEQQ 887

Query: 357  EHSERTRSSKRKTIIPEAEPVSNLRRTRR 271
            E S RTRSSKR +   EAE VSN ++TRR
Sbjct: 888  EDSGRTRSSKRISKTSEAEQVSNSKKTRR 916


>ref|XP_023772256.1| neurofilament heavy polypeptide-like isoform X1 [Lactuca sativa]
          Length = 1006

 Score = 97.4 bits (241), Expect = 7e-20
 Identities = 53/89 (59%), Positives = 66/89 (74%)
 Frame = -1

Query: 537  EPRQPLRQGLRSSCKKEEATPTAKNQLEEVTPVRRVLRSHKSVSEAAKINEVPDHSKEQP 358
            E ++P+RQGLRSS KK+E TP  K + E+V PVRR LRS+ +++EA  INE PD SKEQ 
Sbjct: 919  EKKRPVRQGLRSSIKKQETTPIPKKKEEQVVPVRRSLRSNNTIAEA--INEEPDSSKEQQ 976

Query: 357  EHSERTRSSKRKTIIPEAEPVSNLRRTRR 271
            E S RTRSSKR +   EAE VSN ++TRR
Sbjct: 977  EDSGRTRSSKRISKTSEAEQVSNSKKTRR 1005


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