BLASTX nr result

ID: Chrysanthemum21_contig00044249 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00044249
         (549 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023732558.1| zinc finger MYM-type protein 1-like [Lactuca...    45   7e-06

>ref|XP_023732558.1| zinc finger MYM-type protein 1-like [Lactuca sativa]
          Length = 326

 Score = 45.4 bits (106), Expect(2) = 7e-06
 Identities = 23/35 (65%), Positives = 25/35 (71%)
 Frame = +3

Query: 327 VEPETIATSNLNEVKLDSLIRDPGLRPPILSYPSY 431
           VEPE    SN  EV LDSLIRDPG +P I SYPS+
Sbjct: 34  VEPEKNDVSNSREVNLDSLIRDPGEQPLISSYPSH 68



 Score = 32.0 bits (71), Expect(2) = 7e-06
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 157 MSKKRTTDFFYKRIEDV 207
           MSKKRT DFF+KR EDV
Sbjct: 1   MSKKRTIDFFFKRQEDV 17


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