BLASTX nr result
ID: Chrysanthemum21_contig00043849
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00043849
(397 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTF87593.1| putative gag-polypeptide of LTR copia-type [Helia... 82 1e-16
gb|OTF86030.1| putative ribonuclease H-like domain-containing pr... 82 2e-15
gb|OTG10712.1| putative gag-polypeptide of LTR copia-type [Helia... 75 2e-14
gb|OTG25356.1| putative gag-polypeptide of LTR copia-type [Helia... 72 2e-12
gb|OTG35332.1| putative gag-polypeptide of LTR copia-type [Helia... 73 2e-12
ref|XP_021992301.1| uncharacterized protein LOC110889107 [Helian... 72 3e-12
ref|XP_022011939.1| uncharacterized protein LOC110911621 [Helian... 72 3e-12
gb|OTG08964.1| putative gag-polypeptide of LTR copia-type [Helia... 72 4e-12
ref|XP_021994452.1| uncharacterized protein LOC110891101 [Helian... 72 4e-12
gb|OTG08979.1| putative ribonuclease H-like domain, GAG-pre-inte... 72 5e-12
ref|XP_019158475.1| PREDICTED: uncharacterized protein LOC109155... 70 2e-11
ref|XP_022019596.1| uncharacterized protein LOC110919639 [Helian... 70 3e-11
ref|XP_020535814.1| uncharacterized protein LOC110009728, partia... 68 5e-11
ref|XP_020537368.1| uncharacterized protein LOC110010150 [Jatrop... 68 1e-10
ref|XP_021996287.1| uncharacterized protein LOC110893489 [Helian... 68 1e-10
ref|XP_022032681.1| uncharacterized protein LOC110933783 [Helian... 67 3e-10
gb|OTG29887.1| putative gag-polypeptide of LTR copia-type [Helia... 61 2e-08
ref|XP_021974902.1| uncharacterized protein LOC110870015 [Helian... 55 4e-06
>gb|OTF87593.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 198
Score = 81.6 bits (200), Expect = 1e-16
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = +3
Query: 63 SHHLPFKTH---HKHQ*PAATMTGDGSAGNELAIQIAXXXXXXXXXXXXXXXX-DXXXXX 230
+HH+P + H ATM+GD ++ +EL++Q+A D
Sbjct: 3 AHHIPIDSSQFIHPINPNQATMSGDNNSDSELSLQLANLLKNSLNPQPQNPKLSDNLQIN 62
Query: 231 XXXXXXXYALWTRMIRVAIGGRSKTLLAHLTKEPPESTHESFEAWEQEDLIVFSW 395
Y L TRMIRVAIGG+SK LL HL PP+ E +E WEQ+DL+VFSW
Sbjct: 63 LKLNSQNYGLCTRMIRVAIGGKSKALLKHLNTSPPDQNSEDYEQWEQDDLVVFSW 117
>gb|OTF86030.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1532
Score = 81.6 bits (200), Expect = 2e-15
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +3
Query: 117 MTGDGSAGNELAIQIAXXXXXXXXXXXXXXXX-DXXXXXXXXXXXXYALWTRMIRVAIGG 293
M+GDG+ +EL++QIA D YALWTRMIRVAIGG
Sbjct: 1 MSGDGNQ-DELSLQIANLLKHGVNPQPKSPKLSDSLQINLKLNSQNYALWTRMIRVAIGG 59
Query: 294 RSKTLLAHLTKEPPESTHESFEAWEQEDLIVFSW 395
+SK LL HLT PP+ E++E WEQ+DL+VFSW
Sbjct: 60 KSKNLLKHLTSNPPKQDDETYEQWEQDDLVVFSW 93
>gb|OTG10712.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 163
Score = 75.1 bits (183), Expect = 2e-14
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLT--KEPPESTHESFEAWEQEDLIVFSW 395
YALW+RMIRVAIGG+SK LL HLT +PPE T+ +E WEQ+DL+VFSW
Sbjct: 48 YALWSRMIRVAIGGKSKHLLGHLTGDPKPPEPTNSQYEQWEQDDLVVFSW 97
>gb|OTG25356.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 252
Score = 72.0 bits (175), Expect = 2e-12
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLT--KEPPESTHESFEAWEQEDLIVFSW 395
YALW+RMIRVAIG +SK LL+HLT +PPE T +E WEQ+DL+VFSW
Sbjct: 48 YALWSRMIRVAIGDKSKHLLSHLTGDPKPPEPTDNQYEQWEQDDLVVFSW 97
>gb|OTG35332.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 465
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/50 (70%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLT--KEPPESTHESFEAWEQEDLIVFSW 395
YALW RMIRVAIGG+SK LL HL+ +PPEST +E WEQ DLIVFSW
Sbjct: 127 YALWARMIRVAIGGKSKALLNHLSGDPKPPESTAAEYEQWEQNDLIVFSW 176
>ref|XP_021992301.1| uncharacterized protein LOC110889107 [Helianthus annuus]
gb|OTG06567.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 380
Score = 72.4 bits (176), Expect = 3e-12
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLT--KEPPESTHESFEAWEQEDLIVFSW 395
YALW+RMIRVAIGG+SK LL+HLT +PPE +E WEQ+DL+VFSW
Sbjct: 47 YALWSRMIRVAIGGKSKHLLSHLTGDPKPPEPNDTQYEQWEQDDLVVFSW 96
>ref|XP_022011939.1| uncharacterized protein LOC110911621 [Helianthus annuus]
gb|OTF95102.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 394
Score = 72.4 bits (176), Expect = 3e-12
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLTKE--PPESTHESFEAWEQEDLIVFSW 395
YALW RMIRVAIGG+SK LL+HLT + PP+ ESF+ WEQ+DL+V SW
Sbjct: 50 YALWARMIRVAIGGKSKALLSHLTGKPAPPKPNDESFDQWEQDDLVVISW 99
>gb|OTG08964.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 571
Score = 72.4 bits (176), Expect = 4e-12
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLT--KEPPESTHESFEAWEQEDLIVFSW 395
YALW+RMIRVAIGG+SK LL+HLT +PPE +E WEQ+DL+VFSW
Sbjct: 47 YALWSRMIRVAIGGKSKHLLSHLTGDPKPPEPNDTQYEQWEQDDLVVFSW 96
>ref|XP_021994452.1| uncharacterized protein LOC110891101 [Helianthus annuus]
Length = 386
Score = 72.0 bits (175), Expect = 4e-12
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLTKEPPESTHESFEAWEQEDLIVFSW 395
+ LW+ MIR AIGG+SK LL HL +PPEST +++WEQ+DLIVFSW
Sbjct: 47 FGLWSHMIRAAIGGKSKNLLYHLDSKPPESTDARYDSWEQDDLIVFSW 94
>gb|OTG08979.1| putative ribonuclease H-like domain, GAG-pre-integrase domain,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 851
Score = 72.0 bits (175), Expect = 5e-12
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLTKEPPESTHESFEAWEQEDLIVFSW 395
+ LW+ MIR AIGG+SK LL HL +PPEST +++WEQ+DLIVFSW
Sbjct: 47 FGLWSHMIRAAIGGKSKNLLYHLDSKPPESTDARYDSWEQDDLIVFSW 94
>ref|XP_019158475.1| PREDICTED: uncharacterized protein LOC109155214 [Ipomoea nil]
Length = 975
Score = 70.5 bits (171), Expect = 2e-11
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLT--KEPPESTHESFEAWEQEDLIVFSW 395
YALW RMIRVAIGG+SKTLL+HL+ PP+ E + WEQ+DL+VFSW
Sbjct: 56 YALWARMIRVAIGGKSKTLLSHLSGNPAPPDPKDEKYVQWEQDDLVVFSW 105
>ref|XP_022019596.1| uncharacterized protein LOC110919639 [Helianthus annuus]
Length = 918
Score = 69.7 bits (169), Expect = 3e-11
Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = +3
Query: 255 ALWTRMIRVAIGGRSKTLLAHLTKEP--PESTHESFEAWEQEDLIVFSW 395
A W RMIRVAIGG+SK+LL HL+ P PE T E +E WEQ+DL+VFSW
Sbjct: 50 AWWARMIRVAIGGKSKSLLGHLSGNPAPPEPTDEKYEQWEQDDLVVFSW 98
>ref|XP_020535814.1| uncharacterized protein LOC110009728, partial [Jatropha curcas]
Length = 267
Score = 68.2 bits (165), Expect = 5e-11
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLTK--EPPESTHESFEAWEQEDLIVFSW 395
YA+W+RM++VAIGG+SK LL H+T+ PP + FE WEQEDLIVFSW
Sbjct: 47 YAIWSRMMKVAIGGKSKKLLNHITEAATPPSAGDPHFEKWEQEDLIVFSW 96
>ref|XP_020537368.1| uncharacterized protein LOC110010150 [Jatropha curcas]
Length = 384
Score = 68.2 bits (165), Expect = 1e-10
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLTK--EPPESTHESFEAWEQEDLIVFSW 395
YA+W+RM++VAIGG+SK LL H+T+ PP + FE WEQEDLIVFSW
Sbjct: 47 YAIWSRMMKVAIGGKSKKLLNHITEAATPPSAGDPHFEKWEQEDLIVFSW 96
>ref|XP_021996287.1| uncharacterized protein LOC110893489 [Helianthus annuus]
Length = 548
Score = 67.8 bits (164), Expect = 1e-10
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 252 YALWTRMIRVAIGGRSKTLLAHLTKEPPESTHESFEAWEQEDLIVFSW 395
Y LW RMIRVAIGG+ K LL HLT+ PPE +E WEQ+DLIVFSW
Sbjct: 48 YPLWARMIRVAIGGKLKALLNHLTQNPPEPINEQ---WEQDDLIVFSW 92
>ref|XP_022032681.1| uncharacterized protein LOC110933783 [Helianthus annuus]
Length = 592
Score = 67.0 bits (162), Expect = 3e-10
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 270 MIRVAIGGRSKTLLAHLTKEPPESTHESFEAWEQEDLIVFSW 395
MIRVAIGG+SK LL HL PPE E+FE WEQ+DL+VFSW
Sbjct: 1 MIRVAIGGKSKALLNHLNSNPPEKNSETFEQWEQDDLVVFSW 42
>gb|OTG29887.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 325
Score = 61.2 bits (147), Expect = 2e-08
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 2/44 (4%)
Frame = +3
Query: 270 MIRVAIGGRSKTLLAHLTKEP--PESTHESFEAWEQEDLIVFSW 395
MIRVAIGG+SK LL+HL+ P P+ T E +E WEQ+DLIVFSW
Sbjct: 1 MIRVAIGGKSKPLLSHLSGNPAPPDPTDERYEQWEQDDLIVFSW 44
>ref|XP_021974902.1| uncharacterized protein LOC110870015 [Helianthus annuus]
Length = 325
Score = 55.1 bits (131), Expect = 4e-06
Identities = 24/44 (54%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Frame = +3
Query: 270 MIRVAIGGRSKTLLAHLTKEPP--ESTHESFEAWEQEDLIVFSW 395
MI+VA+GG+SK LL+H+T +P + E +E WEQ+DL+VFSW
Sbjct: 1 MIQVALGGKSKNLLSHITGKPAPLNPSDEQYEQWEQDDLVVFSW 44