BLASTX nr result

ID: Chrysanthemum21_contig00043460 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00043460
         (685 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07717.1| Pseudouridine synthase, catalytic domain-containi...    89   9e-17
ref|XP_023741439.1| tRNA pseudouridine synthase 1-like isoform X...    79   2e-13
gb|PLY67959.1| hypothetical protein LSAT_2X5561 [Lactuca sativa]       79   2e-13
ref|XP_023741438.1| tRNA pseudouridine synthase 1-like isoform X...    79   2e-13
gb|OTF96932.1| putative pseudouridine synthase I, TruA [Helianth...    64   5e-08
ref|XP_022008670.1| uncharacterized protein LOC110908069 [Helian...    64   6e-08

>gb|KVI07717.1| Pseudouridine synthase, catalytic domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 882

 Score = 89.4 bits (220), Expect = 9e-17
 Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 1/201 (0%)
 Frame = -3

Query: 683  VIYSTEAANANRYGRAATPVINIGRTDMFTEVMARAGMEMSKIDIRSTLQG-SFCTTIIP 507
            ++YST A  +  YGRAA      G+ +   + +   G+ ++ ID+++  +G SF +TI+P
Sbjct: 673  IVYSTSANRSRTYGRAAPFNFIYGQFERLIDNLEAIGVPLATIDVKAVDRGGSFFSTIVP 732

Query: 506  DLNHNLWTFSSTQHPSHYEDLDLLRAWFILHDDINFRCVAYCGLVIEKNXXXXXXXXXXX 327
              +  LW F +  H SHY+  D++ AWF LHDD        C L IE             
Sbjct: 733  THHDGLWGFIAPFHHSHYKHKDIVNAWFTLHDDPTICAFEDCSLRIECCTDPAVVDAVNA 792

Query: 326  XXXXXXXXXXXXXXXXADPIGLNFPCNHFGILXXXXXXXXXXXXXXXVYILGRGTTVYNS 147
                              P+G  FP N FGI                VYI+GRG   Y  
Sbjct: 793  TGPENAPDDLDGAMARTQPVGGRFPVNVFGIRSAVAAKGANAAVPAAVYIIGRGNKRYYC 852

Query: 146  TILGSRLSEDDMIQWAQAVMF 84
            T L   L++ +M    +  +F
Sbjct: 853  TSLARNLTQREMFSLLREFIF 873


>ref|XP_023741439.1| tRNA pseudouridine synthase 1-like isoform X2 [Lactuca sativa]
          Length = 824

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 58/200 (29%), Positives = 83/200 (41%)
 Frame = -3

Query: 683  VIYSTEAANANRYGRAATPVINIGRTDMFTEVMARAGMEMSKIDIRSTLQGSFCTTIIPD 504
            V+Y+T +A    YGRA     +  R D F E +   G+  + ID++ST  GSF +T+IP 
Sbjct: 631  VVYATSSATCRNYGRAEQFNFS-SRYDHFIECLEAMGVPCAPIDVKSTDCGSFFSTVIPT 689

Query: 503  LNHNLWTFSSTQHPSHYEDLDLLRAWFILHDDINFRCVAYCGLVIEKNXXXXXXXXXXXX 324
              H +W F++  H SHYE  D++ AW   +DD   R      + I               
Sbjct: 690  FEHGVWRFTAPFHHSHYEPKDIVSAWLTQNDDPALRAFEDLSVTI---------GLCTDP 740

Query: 323  XXXXXXXXXXXXXXXADPIGLNFPCNHFGILXXXXXXXXXXXXXXXVYILGRGTTVYNST 144
                              IG  FP N  GI                VYI+GRG+  Y  T
Sbjct: 741  KVVDAVAGVDGDVGSTRLIGGTFPVNVSGI-----RPAGCGSDPAGVYIVGRGSERYYCT 795

Query: 143  ILGSRLSEDDMIQWAQAVMF 84
            +L  R+  D+M    +  +F
Sbjct: 796  LLAQRICPDEMYSLLREYIF 815


>gb|PLY67959.1| hypothetical protein LSAT_2X5561 [Lactuca sativa]
          Length = 849

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 58/200 (29%), Positives = 83/200 (41%)
 Frame = -3

Query: 683  VIYSTEAANANRYGRAATPVINIGRTDMFTEVMARAGMEMSKIDIRSTLQGSFCTTIIPD 504
            V+Y+T +A    YGRA     +  R D F E +   G+  + ID++ST  GSF +T+IP 
Sbjct: 656  VVYATSSATCRNYGRAEQFNFS-SRYDHFIECLEAMGVPCAPIDVKSTDCGSFFSTVIPT 714

Query: 503  LNHNLWTFSSTQHPSHYEDLDLLRAWFILHDDINFRCVAYCGLVIEKNXXXXXXXXXXXX 324
              H +W F++  H SHYE  D++ AW   +DD   R      + I               
Sbjct: 715  FEHGVWRFTAPFHHSHYEPKDIVSAWLTQNDDPALRAFEDLSVTI---------GLCTDP 765

Query: 323  XXXXXXXXXXXXXXXADPIGLNFPCNHFGILXXXXXXXXXXXXXXXVYILGRGTTVYNST 144
                              IG  FP N  GI                VYI+GRG+  Y  T
Sbjct: 766  KVVDAVAGVDGDVGSTRLIGGTFPVNVSGI-----RPAGCGSDPAGVYIVGRGSERYYCT 820

Query: 143  ILGSRLSEDDMIQWAQAVMF 84
            +L  R+  D+M    +  +F
Sbjct: 821  LLAQRICPDEMYSLLREYIF 840


>ref|XP_023741438.1| tRNA pseudouridine synthase 1-like isoform X1 [Lactuca sativa]
          Length = 851

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 58/200 (29%), Positives = 83/200 (41%)
 Frame = -3

Query: 683  VIYSTEAANANRYGRAATPVINIGRTDMFTEVMARAGMEMSKIDIRSTLQGSFCTTIIPD 504
            V+Y+T +A    YGRA     +  R D F E +   G+  + ID++ST  GSF +T+IP 
Sbjct: 658  VVYATSSATCRNYGRAEQFNFS-SRYDHFIECLEAMGVPCAPIDVKSTDCGSFFSTVIPT 716

Query: 503  LNHNLWTFSSTQHPSHYEDLDLLRAWFILHDDINFRCVAYCGLVIEKNXXXXXXXXXXXX 324
              H +W F++  H SHYE  D++ AW   +DD   R      + I               
Sbjct: 717  FEHGVWRFTAPFHHSHYEPKDIVSAWLTQNDDPALRAFEDLSVTI---------GLCTDP 767

Query: 323  XXXXXXXXXXXXXXXADPIGLNFPCNHFGILXXXXXXXXXXXXXXXVYILGRGTTVYNST 144
                              IG  FP N  GI                VYI+GRG+  Y  T
Sbjct: 768  KVVDAVAGVDGDVGSTRLIGGTFPVNVSGI-----RPAGCGSDPAGVYIVGRGSERYYCT 822

Query: 143  ILGSRLSEDDMIQWAQAVMF 84
            +L  R+  D+M    +  +F
Sbjct: 823  LLAQRICPDEMYSLLREYIF 842


>gb|OTF96932.1| putative pseudouridine synthase I, TruA [Helianthus annuus]
          Length = 528

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 1/192 (0%)
 Frame = -3

Query: 683 VIYSTEAANANRYGRAATPVINIGRTDMFTEVMARAGMEMSKIDIRS-TLQGSFCTTIIP 507
           V+Y+T    +   GRA       G      + +   G+ ++ ID++     GSF  TI+ 
Sbjct: 315 VVYATSPDRSKTCGRAQHFEFISGHFFRLIDNLEAIGVPLAPIDVKGGNRAGSFYPTILL 374

Query: 506 DLNHNLWTFSSTQHPSHYEDLDLLRAWFILHDDINFRCVAYCGLVIEKNXXXXXXXXXXX 327
           D  +    F++T H S+Y+  D+  AW  ++DD   R    C L IE             
Sbjct: 375 DRVNGWLEFTATCHYSNYKHRDIDSAWLTINDDPALRAFPDCSLRIECCTNPDVVNAVIA 434

Query: 326 XXXXXXXXXXXXXXXXADPIGLNFPCNHFGILXXXXXXXXXXXXXXXVYILGRGTTVYNS 147
                           A P+GL F  N FG+                VYI+GRG+  Y  
Sbjct: 435 SRPEGVPDDVDGATAPARPVGLIFNVNEFGVRPAVAAEGGNPAIPAAVYIVGRGSKRYFC 494

Query: 146 TILGSRLSEDDM 111
           T L   L+ED+M
Sbjct: 495 TSLARGLTEDEM 506


>ref|XP_022008670.1| uncharacterized protein LOC110908069 [Helianthus annuus]
          Length = 845

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 1/192 (0%)
 Frame = -3

Query: 683  VIYSTEAANANRYGRAATPVINIGRTDMFTEVMARAGMEMSKIDIRS-TLQGSFCTTIIP 507
            V+Y+T    +   GRA       G      + +   G+ ++ ID++     GSF  TI+ 
Sbjct: 632  VVYATSPDRSKTCGRAQHFEFISGHFFRLIDNLEAIGVPLAPIDVKGGNRAGSFYPTILL 691

Query: 506  DLNHNLWTFSSTQHPSHYEDLDLLRAWFILHDDINFRCVAYCGLVIEKNXXXXXXXXXXX 327
            D  +    F++T H S+Y+  D+  AW  ++DD   R    C L IE             
Sbjct: 692  DRVNGWLEFTATCHYSNYKHRDIDSAWLTINDDPALRAFPDCSLRIECCTNPDVVNAVIA 751

Query: 326  XXXXXXXXXXXXXXXXADPIGLNFPCNHFGILXXXXXXXXXXXXXXXVYILGRGTTVYNS 147
                            A P+GL F  N FG+                VYI+GRG+  Y  
Sbjct: 752  SRPEGVPDDVDGATAPARPVGLIFNVNEFGVRPAVAAEGGNPAIPAAVYIVGRGSKRYFC 811

Query: 146  TILGSRLSEDDM 111
            T L   L+ED+M
Sbjct: 812  TSLARGLTEDEM 823


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