BLASTX nr result

ID: Chrysanthemum21_contig00043314 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00043314
         (402 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95556.1| C1-like protein [Cynara cardunculus var. scolymus]      54   8e-06

>gb|KVH95556.1| C1-like protein [Cynara cardunculus var. scolymus]
          Length = 538

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
 Frame = +2

Query: 29  DCDNDGKIWAHKCEDC*FDLHHDC----DNWKNEAADLLKEGEKANEG*ITFG 175
           +CD DGKIWA+ CE+C FDLH +C     N K E  +   E EKANEG I  G
Sbjct: 480 ECDKDGKIWAYSCEECNFDLHTECALKESNGKKE-TETETETEKANEGWICDG 531


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