BLASTX nr result

ID: Chrysanthemum21_contig00043296 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00043296
         (547 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013719272.1| cullin-1-like [Brassica napus]                     60   3e-07
ref|XP_009119589.1| PREDICTED: cullin-1-like [Brassica rapa]           59   8e-07
ref|XP_022545706.1| cullin-1-like [Brassica napus]                     59   1e-06
emb|CDY51951.1| BnaA08g11670D [Brassica napus]                         59   1e-06
ref|XP_009108761.1| PREDICTED: cullin-1-like [Brassica rapa]           59   1e-06
emb|CDY18137.1| BnaC05g01600D [Brassica napus]                         57   4e-06

>ref|XP_013719272.1| cullin-1-like [Brassica napus]
          Length = 728

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
 Frame = -2

Query: 546 INWLSYAFARL--GGVATRS------LAFEYFQSL-YLCFEFDFKRLLIKYIREAREVSE 394
           + WLS+ F  L    ++ R+      +A + F+ L YL  +   K +++  I + RE  E
Sbjct: 107 VKWLSHFFTYLERSFISYRNYPSLLEVAMKSFRDLVYLEVQVSAKDVVMALINKEREGGE 166

Query: 393 SKLPFIKRALHAIIELKPSCVD----DLKKHTINECVSDYESLARSWSFNCSCSEYLYKV 226
            +   +K  +   ++     ++    D +   + +  S Y   A SW    SC EY+ K 
Sbjct: 167 IERELLKNIVDIFVQSGMGTMEMYEKDFEMFLLEDTASYYSRKASSWIQEDSCPEYMIKS 226

Query: 225 ETFIEKEV-LLLYDCFDSTEPNLIEVLQYKFLIDGSPGWLKGAGYLSLFHDDAL-DLQRL 52
           E  ++KE   +++    +TEP L+E++Q K L+  +   L+     +L  DD + DL R+
Sbjct: 227 EESLKKEKERVIHYLHSTTEPKLVEIVQEKLLVSVAKQLLEKEHLCALLRDDKMDDLSRM 286

Query: 51  GRILSGMDQAFSFLASA 1
            R+ + +      +A A
Sbjct: 287 YRLFNPIPNGLELVAKA 303


>ref|XP_009119589.1| PREDICTED: cullin-1-like [Brassica rapa]
          Length = 728

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
 Frame = -2

Query: 546 INWLSYAFARL--GGVATRS------LAFEYFQSL-YLCFEFDFKRLLIKYIREAREVSE 394
           + WLS+ F  L    ++ R+      +A + F+ L YL  +   K +++  I + RE  E
Sbjct: 107 VKWLSHFFTYLERSFISYRNYPSLLEVAMKSFRDLVYLEVQVSAKDVVMALINKEREGGE 166

Query: 393 SKLPFIKRALHAIIELKPSCVD----DLKKHTINECVSDYESLARSWSFNCSCSEYLYKV 226
            +   +K  +   ++     ++    D +   + +  S Y   A SW    SC EY+ K 
Sbjct: 167 IERELLKNIVDIFVQSGMGTMEMYEKDFEMFLLEDTASYYSRKASSWIQEDSCPEYMIKS 226

Query: 225 ETFIEKE-VLLLYDCFDSTEPNLIEVLQYKFLIDGSPGWLKGAGYLSLFHDDAL-DLQRL 52
           E  ++KE   + +    +TEP L+E++Q K L+  +   L+     +L  DD + DL R+
Sbjct: 227 EESLKKEKERVTHYLHSTTEPKLVEIVQEKLLVSVAKQLLEKEHLCALLRDDKMDDLSRM 286

Query: 51  GRILSGMDQAFSFLASA 1
            R+ + +      +A A
Sbjct: 287 YRLFNPIPNGLELVAKA 303


>ref|XP_022545706.1| cullin-1-like [Brassica napus]
          Length = 737

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
 Frame = -2

Query: 546 INWLSYAFARLGG--VATRSLAFE-------YFQSLYLCFEFDFKRLLIKYIREAREVSE 394
           + WLS+ F  L    +  RSL          +   +Y    F+ K+++I  I + RE  +
Sbjct: 108 VRWLSHFFFYLDRYFITRRSLPSLTEVGMTCFRDHVYNNVHFNVKQVIIALIHKEREGQQ 167

Query: 393 SKLPFIKRALHAIIELKPSCV----DDLKKHTINECVSDYESLARSWSFNCSCSEYLYKV 226
                +K  L   ++     +    DD +K  + E  S Y   + SW    SC EY+ K 
Sbjct: 168 VDSALLKNILDLFVQSGKGSMERYEDDFEKFFLQETASYYSRRSSSWILEDSCPEYMIKS 227

Query: 225 ETFIEKE-VLLLYDCFDSTEPNLIEVLQYKFLIDGSPGWL--KGAGYLSLFHDDAL-DLQ 58
           E  ++KE   + +    +TEP L+EV+Q + L+  +   L  + +G  +L  DD + DL 
Sbjct: 228 EESLKKEKERVTHYLHSTTEPKLVEVVQTRLLVLVAKQLLEKESSGCSALLRDDKIDDLS 287

Query: 57  RLGRILSGMDQAFSFLASA 1
           R+ R+   + +    +A A
Sbjct: 288 RMYRLYHEIPKGLEPVAKA 306


>emb|CDY51951.1| BnaA08g11670D [Brassica napus]
          Length = 737

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
 Frame = -2

Query: 546 INWLSYAFARLGG--VATRSLAFE-------YFQSLYLCFEFDFKRLLIKYIREAREVSE 394
           + WLS+ F  L    +  RSL          +   +Y    F+ K+++I  I + RE  +
Sbjct: 108 VRWLSHFFFYLDRYFITRRSLPSLTEVGMTCFRDHVYNNVHFNVKQVIIALIHKEREGQQ 167

Query: 393 SKLPFIKRALHAIIELKPSCV----DDLKKHTINECVSDYESLARSWSFNCSCSEYLYKV 226
                +K  L   ++     +    DD +K  + E  S Y   + SW    SC EY+ K 
Sbjct: 168 VDSALLKNILDLFVQSGKGSMERYEDDFEKFFLQETASYYSRRSSSWILEDSCPEYMIKS 227

Query: 225 ETFIEKE-VLLLYDCFDSTEPNLIEVLQYKFLIDGSPGWL--KGAGYLSLFHDDAL-DLQ 58
           E  ++KE   + +    +TEP L+EV+Q + L+  +   L  + +G  +L  DD + DL 
Sbjct: 228 EESLKKEKERVTHYLHSTTEPKLVEVVQTRLLVLVAKQLLEKESSGCSALLRDDKIDDLS 287

Query: 57  RLGRILSGMDQAFSFLASA 1
           R+ R+   + +    +A A
Sbjct: 288 RMYRLYHEIPKGLEPVAKA 306


>ref|XP_009108761.1| PREDICTED: cullin-1-like [Brassica rapa]
          Length = 741

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
 Frame = -2

Query: 546 INWLSYAFARLGG--VATRSLAFE-------YFQSLYLCFEFDFKRLLIKYIREAREVSE 394
           + WLS+ F  L    +  RSL          +   +Y    F+ K+++I  I + RE  +
Sbjct: 108 VRWLSHFFFYLDRYFITRRSLPSLTEVGMTCFRDHVYNNVHFNVKQVIIALIHKEREGQQ 167

Query: 393 SKLPFIKRALHAIIELKPSCV----DDLKKHTINECVSDYESLARSWSFNCSCSEYLYKV 226
                +K  L   ++     +    DD +K  + E  S Y   + SW    SC EY+ K 
Sbjct: 168 VDSALLKNILDLFVQSGKGSMERYEDDFEKFFLQETASYYSRRSSSWILEDSCPEYMIKS 227

Query: 225 ETFIEKE-VLLLYDCFDSTEPNLIEVLQYKFLIDGSPGWL--KGAGYLSLFHDDAL-DLQ 58
           E  ++KE   + +    +TEP L+EV+Q + L+  +   L  + +G  +L  DD + DL 
Sbjct: 228 EESLKKEKERVTHYLHSTTEPKLVEVVQTRLLVLVAKQLLEKESSGCSALLRDDKIDDLS 287

Query: 57  RLGRILSGMDQAFSFLASA 1
           R+ R+   + +    +A A
Sbjct: 288 RMYRLYHEIPKGLEPVAKA 306


>emb|CDY18137.1| BnaC05g01600D [Brassica napus]
          Length = 1467

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
 Frame = -2

Query: 546 INWLSYAFARLGGV--------ATRSLAFEYFQSL-YLCFEFDFKRLLIKYIREAREVSE 394
           + WLS+ F  L           +   +A + F+ L YL  +   K +++  I + RE  +
Sbjct: 107 VKWLSHFFNYLERFFISYRNYPSLLEVAMKSFRDLVYLEVQVSVKDVVMALIHKEREGEQ 166

Query: 393 SKLPFIKRALHAIIELKPSCVD----DLKKHTINECVSDYESLARSWSFNCSCSEYLYKV 226
            +   +K  +   ++     ++    D +   + +  S Y   A SW    SC EY+ K 
Sbjct: 167 IERELLKNIVDIFVQSGMGTMERYEKDFEMFLLEDTASYYSRKASSWIQEDSCPEYMIKS 226

Query: 225 ETFIEKEV-LLLYDCFDSTEPNLIEVLQYKFLIDGSPGWLKGAGYLSLFHDDAL-DLQRL 52
           E  ++KE   +++    +TEP L+E++Q K L+  +   L+     +L  DD + DL R+
Sbjct: 227 EESLKKEKERVIHYLHSTTEPKLVEIVQEKLLVSVAKQLLEKEHLCALLRDDKMDDLSRI 286

Query: 51  GRILSGMDQAFSFLASA 1
            R+ + + +    +A A
Sbjct: 287 YRLFNPITKGLEPVAEA 303


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