BLASTX nr result
ID: Chrysanthemum21_contig00043192
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00043192
(580 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021972246.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Heliant... 86 4e-16
gb|KVI03393.1| Plant organelle RNA recognition domain-containing... 85 4e-16
ref|XP_023741319.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like [La... 71 5e-11
gb|PLY68080.1| hypothetical protein LSAT_7X61661 [Lactuca sativa] 71 6e-11
ref|XP_021975297.1| uncharacterized protein LOC110870424 [Helian... 69 3e-10
ref|XP_019152755.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 67 2e-09
ref|XP_019264542.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 63 3e-08
ref|XP_022846451.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea eu... 62 7e-08
ref|XP_016453640.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 59 9e-07
ref|XP_009592260.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 59 9e-07
ref|XP_016543991.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT... 58 2e-06
gb|PHU06178.1| hypothetical protein BC332_27000 [Capsicum chinense] 58 2e-06
gb|PHT63462.1| hypothetical protein T459_32686 [Capsicum annuum] 58 2e-06
gb|PHT37186.1| hypothetical protein CQW23_24886 [Capsicum baccatum] 58 2e-06
gb|PPS11398.1| hypothetical protein GOBAR_AA09246 [Gossypium bar... 56 8e-06
ref|XP_017627792.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 56 1e-05
ref|XP_021288070.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Herrani... 56 1e-05
>ref|XP_021972246.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Helianthus annuus]
gb|OTG36616.1| putative ubiquitin carboxyl-terminal hydrolase family protein
[Helianthus annuus]
Length = 446
Score = 85.9 bits (211), Expect = 4e-16
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKESIG----DQNRAGEIEDDFVISILD 168
VSP+PVY VRRKML+LILL +RNTRELRS ++VKES+G + NR G IEDDFVI IL+
Sbjct: 360 VSPDPVYVVRRKMLDLILLGSRNTRELRSQREVKESVGGDNHNHNRGGVIEDDFVIPILE 419
Query: 169 KFVXXXXXXXENTQNREGTSDGDY 240
F +NT + G D D+
Sbjct: 420 NF-----DYNDNTNSENGEDDDDH 438
>gb|KVI03393.1| Plant organelle RNA recognition domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 313
Score = 84.7 bits (208), Expect = 4e-16
Identities = 43/71 (60%), Positives = 51/71 (71%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKESIGDQNRAGEIEDDFVISILDKFVX 180
VSPNPVY VRRKML+LILL R+TREL SP+QVKES+GDQNR +E DFV SIL+
Sbjct: 231 VSPNPVYVVRRKMLDLILLGCRSTRELDSPRQVKESVGDQNRGAVVESDFVTSILENLDD 290
Query: 181 XXXXXXENTQN 213
EN ++
Sbjct: 291 NNDGNKENGED 301
>ref|XP_023741319.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like [Lactuca sativa]
Length = 430
Score = 71.2 bits (173), Expect = 5e-11
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRS-PKQVKESI-GDQNRAGEIEDDFVISILDKF 174
VSPNPVY VRRKML+L+L+ RNTR+L S P+ VKES+ GD N G++E DFVIS L+ F
Sbjct: 360 VSPNPVYIVRRKMLDLVLMRRRNTRDLTSRPRDVKESVAGDWNGGGDLEGDFVISNLENF 419
>gb|PLY68080.1| hypothetical protein LSAT_7X61661 [Lactuca sativa]
Length = 813
Score = 71.2 bits (173), Expect = 6e-11
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRS-PKQVKESI-GDQNRAGEIEDDFVISILDKF 174
VSPNPVY VRRKML+L+L+ RNTR+L S P+ VKES+ GD N G++E DFVIS L+ F
Sbjct: 743 VSPNPVYIVRRKMLDLVLMRRRNTRDLTSRPRDVKESVAGDWNGGGDLEGDFVISNLENF 802
>ref|XP_021975297.1| uncharacterized protein LOC110870424 [Helianthus annuus]
Length = 310
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Frame = +1
Query: 28 RRKMLNLILLATRNTRELRSPKQVKESIG--DQNRAGEIEDDFVISILDKFVXXXXXXXE 201
RRKML+LILL +RNTRELRS ++VKES+G D+N+ G I+DDFVISIL+ F E
Sbjct: 46 RRKMLDLILLGSRNTRELRSQREVKESVGGDDRNQGGVIKDDFVISILEIFDDNDNRNSE 105
Query: 202 NTQNR 216
N + +
Sbjct: 106 NGEEQ 110
>ref|XP_019152755.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ipomoea nil]
Length = 426
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/62 (50%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKESIGD----QNRAGEIEDDFVISILD 168
+ PNPVY+VRRK+L L+L+ +RNTREL+ ++VK+ I + +NR+ +DDFVI IL+
Sbjct: 362 IEPNPVYDVRRKVLELMLMGSRNTRELKLQREVKDDIDNVKATENRSSSADDDFVIPILE 421
Query: 169 KF 174
F
Sbjct: 422 SF 423
>ref|XP_019264542.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
attenuata]
ref|XP_019264543.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
attenuata]
ref|XP_019264544.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
attenuata]
ref|XP_019264545.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
attenuata]
ref|XP_019264546.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
attenuata]
gb|OIT36341.1| protein root primordium defective 1 [Nicotiana attenuata]
Length = 503
Score = 63.2 bits (152), Expect = 3e-08
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKESI----GDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRKML L+LL RNTRELR+ +++K+ I D+N E DFVI IL+
Sbjct: 432 IEPNPIYDLRRKMLELLLLGNRNTRELRTERELKDEIRDMTDDENGWESREGDFVIPILE 491
Query: 169 KF 174
F
Sbjct: 492 SF 493
>ref|XP_022846451.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]
ref|XP_022846453.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]
ref|XP_022846459.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]
ref|XP_022846462.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]
ref|XP_022846467.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]
ref|XP_022846472.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]
Length = 417
Score = 62.0 bits (149), Expect = 7e-08
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKE--SIGDQNRAGEIEDDFVISILDKF 174
V PNPVY+VRRKML LILL RNT+ELR +V++ + ++N G + DFVI IL+ F
Sbjct: 353 VEPNPVYDVRRKMLELILLGCRNTKELREWSEVEDRRKVCNENELGVRDGDFVIPILESF 412
>ref|XP_016453640.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana
tabacum]
Length = 458
Score = 58.9 bits (141), Expect = 9e-07
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKESI----GDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRK+L+L+LL R+TRELR+ ++K+ I D+N E DFVI IL+
Sbjct: 387 IEPNPIYDLRRKVLDLLLLGNRHTRELRTEMELKDEIRDMTDDENGWENREGDFVIPILE 446
Query: 169 KF 174
F
Sbjct: 447 SF 448
>ref|XP_009592260.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana
tomentosiformis]
Length = 458
Score = 58.9 bits (141), Expect = 9e-07
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKESI----GDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRK+L L+LL R+TRELR+ ++K+ I D+N E DFVI IL+
Sbjct: 387 IEPNPIYDLRRKVLELLLLGNRHTRELRTEMELKDEIRDMTDDENGWENSEGDFVIPILE 446
Query: 169 KF 174
F
Sbjct: 447 SF 448
>ref|XP_016543991.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1
[Capsicum annuum]
Length = 447
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKES----IGDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRKML LILL R+TRELR+ +++K+ D N E DFVI IL+
Sbjct: 376 IEPNPIYDLRRKMLELILLGNRHTRELRTERELKDETKDMTDDDNGWESREGDFVIPILE 435
Query: 169 KF 174
F
Sbjct: 436 CF 437
>gb|PHU06178.1| hypothetical protein BC332_27000 [Capsicum chinense]
Length = 452
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKES----IGDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRKML LILL R+TRELR+ +++K+ D N E DFVI IL+
Sbjct: 381 IEPNPIYDLRRKMLELILLGNRHTRELRTERELKDETKDMTDDDNGWESREGDFVIPILE 440
Query: 169 KF 174
F
Sbjct: 441 CF 442
>gb|PHT63462.1| hypothetical protein T459_32686 [Capsicum annuum]
Length = 452
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKES----IGDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRKML LILL R+TRELR+ +++K+ D N E DFVI IL+
Sbjct: 381 IEPNPIYDLRRKMLELILLGNRHTRELRTERELKDETKDMTDDDNGWESREGDFVIPILE 440
Query: 169 KF 174
F
Sbjct: 441 CF 442
>gb|PHT37186.1| hypothetical protein CQW23_24886 [Capsicum baccatum]
Length = 452
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKES----IGDQNRAGEIEDDFVISILD 168
+ PNP+Y++RRKML LILL R+TRELR+ +++K+ D N E DFVI IL+
Sbjct: 381 IEPNPIYDLRRKMLELILLGNRHTRELRTERELKDETKDMTDDDNGWESREGDFVIPILE 440
Query: 169 KF 174
F
Sbjct: 441 CF 442
>gb|PPS11398.1| hypothetical protein GOBAR_AA09246 [Gossypium barbadense]
Length = 585
Score = 56.2 bits (134), Expect = 8e-06
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 7 PNPVYEVRRKMLNLILLATRNTRELRSPKQVKE----SIGDQNRAGEIEDDFVISILDKF 174
PNP+Y VRRKML+LILL RNTR L +++KE S+ N G + D+VI ILD +
Sbjct: 500 PNPIYVVRRKMLDLILLGRRNTRSLEDLEEIKEERNGSVFRTNVGGRRDGDWVIPILDSY 559
>ref|XP_017627792.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Gossypium arboreum]
Length = 436
Score = 55.8 bits (133), Expect = 1e-05
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 7 PNPVYEVRRKMLNLILLATRNTRELRSPKQVKE----SIGDQNRAGEIEDDFVISILDKF 174
PNP+Y VRRKML+LILL RNTR L +++KE S+ N G + D+VI ILD +
Sbjct: 351 PNPIYVVRRKMLDLILLGRRNTRPLEDLEEIKEERNGSVFRTNVGGRRDGDWVIPILDSY 410
>ref|XP_021288070.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Herrania umbratica]
ref|XP_021288071.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Herrania umbratica]
Length = 447
Score = 55.8 bits (133), Expect = 1e-05
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Frame = +1
Query: 1 VSPNPVYEVRRKMLNLILLATRNTRELRSPKQVKES----IGDQNRAGEIEDDFVISILD 168
V PNP+Y VRRKML+LILL RNTR L+ P+++KE + + G + D+V+ ILD
Sbjct: 349 VVPNPIYVVRRKMLDLILLGCRNTRSLQYPEEIKEERNGLVFKTSGGGRRDGDWVLPILD 408