BLASTX nr result

ID: Chrysanthemum21_contig00043044 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00043044
         (427 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX47049.1| AP2-like transcriptional factor [Brassica rapa]         41   2e-06

>gb|AAX47049.1| AP2-like transcriptional factor [Brassica rapa]
          Length = 400

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 294 RAYDKASIKCNKREAITYFDDSSYD 368
           RAYDKA+IKCN ++A+T FD S YD
Sbjct: 232 RAYDKAAIKCNGKDAVTNFDPSIYD 256



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 21/32 (65%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +1

Query: 190 IGGSDTAHVAAWAYDPATIGFFG--ADINFNI 279
           +GG DTAH AA AYD A I F G  ADINF I
Sbjct: 161 LGGFDTAHAAARAYDRAAIKFRGVEADINFTI 192


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