BLASTX nr result

ID: Chrysanthemum21_contig00042763 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00042763
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008349478.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    91   5e-19
ref|XP_022969283.1| pre-mRNA-splicing factor CWC22 homolog [Cucu...    91   1e-18
ref|XP_008366188.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    91   1e-18
ref|XP_008384529.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    91   1e-18
ref|XP_013591944.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...    90   2e-18
ref|XP_013699401.1| pre-mRNA-splicing factor CWC22 homolog [Bras...    90   2e-18
ref|XP_022928022.1| pre-mRNA-splicing factor CWC22 homolog [Cucu...    90   2e-18
gb|PLY86232.1| hypothetical protein LSAT_8X42161 [Lactuca sativa]      89   2e-18
ref|XP_008449736.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    90   3e-18
ref|XP_013676847.1| pre-mRNA-splicing factor CWC22 homolog isofo...    90   3e-18
ref|XP_008449735.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    90   3e-18
ref|XP_022554626.1| pre-mRNA-splicing factor CWC22 homolog isofo...    90   3e-18
ref|XP_013651028.1| LOW QUALITY PROTEIN: pre-mRNA-splicing facto...    89   3e-18
ref|XP_010441342.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    89   3e-18
ref|XP_013651027.1| LOW QUALITY PROTEIN: pre-mRNA-splicing facto...    89   3e-18
ref|XP_018807479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    89   4e-18
ref|XP_006389848.1| pre-mRNA-splicing factor CWC22 homolog [Eutr...    89   4e-18
emb|CDY49736.1| BnaA02g19360D [Brassica napus]                         89   5e-18
ref|XP_013620939.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    89   5e-18
ref|XP_009128380.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    89   5e-18

>ref|XP_008349478.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Malus domestica]
          Length = 377

 Score = 90.9 bits (224), Expect = 5e-19
 Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = -3

Query: 315 TMEKKSC--LKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRM 142
           T+ +K+   + + RS E N+ +D +K  + K+G VYIPPFKL +M   V+DKSSV+YQR+
Sbjct: 159 TLREKNANSIPQGRSQEGNMNADVAK--SGKSGXVYIPPFKLARMMKEVEDKSSVQYQRL 216

Query: 141 AWDALKESINGLVNKVNGEMIRNFIP 64
            WDAL++SINGLVNKVN   I+N IP
Sbjct: 217 TWDALRKSINGLVNKVNAANIKNIIP 242


>ref|XP_022969283.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
 ref|XP_022969291.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
 ref|XP_022969299.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
 ref|XP_022969308.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
 ref|XP_022969316.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
 ref|XP_022969320.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
 ref|XP_022969324.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]
          Length = 965

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 46/84 (54%), Positives = 59/84 (70%)
 Frame = -3

Query: 315 TMEKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAW 136
           T++     ++ + +E N+ SD S     K+G VYIPPFKL +M   VQDKSSVEYQR+ W
Sbjct: 359 TLDHPQPHRQEKQSENNLNSDASNLG--KSGGVYIPPFKLARMMREVQDKSSVEYQRLTW 416

Query: 135 DALKESINGLVNKVNGEMIRNFIP 64
           DAL++SINGLVNKVN   I+N IP
Sbjct: 417 DALRKSINGLVNKVNATNIKNIIP 440


>ref|XP_008366188.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Malus domestica]
          Length = 757

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = -3

Query: 315 TMEKKSC--LKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRM 142
           T+ +K+   + + RS E N+ +D +K  + K+G VYIPPFKL +M   V+DKSSV+YQR+
Sbjct: 135 TLREKNANSIPQGRSQEGNMNADVAK--SGKSGGVYIPPFKLARMMKEVEDKSSVQYQRL 192

Query: 141 AWDALKESINGLVNKVNGEMIRNFIP 64
            WDAL++SINGLVNKVN   I+N IP
Sbjct: 193 TWDALRKSINGLVNKVNAANIKNIIP 218


>ref|XP_008384529.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Malus domestica]
          Length = 781

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = -3

Query: 315 TMEKKSC--LKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRM 142
           T+ +K+   + + RS E N+ +D +K  + K+G VYIPPFKL +M   V+DKSSV+YQR+
Sbjct: 159 TLREKNANSIPQGRSQEGNMNADVAK--SGKSGGVYIPPFKLARMMKEVEDKSSVQYQRL 216

Query: 141 AWDALKESINGLVNKVNGEMIRNFIP 64
            WDAL++SINGLVNKVN   I+N IP
Sbjct: 217 TWDALRKSINGLVNKVNAANIKNIIP 242


>ref|XP_013591944.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Brassica oleracea var. oleracea]
          Length = 570

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD + +   KTG VYIPPFKL +M   V DKSSVEYQR+ WDA
Sbjct: 47  EEKSGVTKPKLPELN-PSDSNAKAWGKTGGVYIPPFKLARMMKEVDDKSSVEYQRLTWDA 105

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 106 LRKSINGLVNKVNASNIKNIIP 127


>ref|XP_013699401.1| pre-mRNA-splicing factor CWC22 homolog [Brassica napus]
          Length = 666

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD + +   KTG VYIPPFKL +M   V DKSSVEYQR+ WDA
Sbjct: 77  EEKSGVTKPKLPELN-PSDSNAKAWGKTGGVYIPPFKLARMMKEVDDKSSVEYQRLTWDA 135

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 136 LRKSINGLVNKVNASNIKNIIP 157


>ref|XP_022928022.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]
 ref|XP_022928025.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]
 ref|XP_022928034.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]
 ref|XP_022928043.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]
 ref|XP_022928050.1| pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]
          Length = 962

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -3

Query: 315 TMEKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAW 136
           T++     ++ +  E N+ SD S     K+G VYIPPFKL +M   VQDKSSVEYQR+ W
Sbjct: 356 TLDHPQPHRQEKQPENNLNSDASNLG--KSGGVYIPPFKLARMMKEVQDKSSVEYQRLTW 413

Query: 135 DALKESINGLVNKVNGEMIRNFIP 64
           DAL++SINGLVNKVN   I+N IP
Sbjct: 414 DALRKSINGLVNKVNATNIKNIIP 437


>gb|PLY86232.1| hypothetical protein LSAT_8X42161 [Lactuca sativa]
          Length = 365

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 47/79 (59%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
 Frame = -3

Query: 294 LKRNRSNEKNVKSD-KSKRTNT-KTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDALKE 121
           +K+NR +E    +D +   TN  K+G VYIPPFKL +M S  QDKSS+EYQRM WDAL++
Sbjct: 3   IKKNRMSEFQKLADLQESMTNLGKSGLVYIPPFKLARMMSEFQDKSSMEYQRMTWDALRK 62

Query: 120 SINGLVNKVNGEMIRNFIP 64
           SINGLVNKVN   I+N IP
Sbjct: 63  SINGLVNKVNATNIKNIIP 81


>ref|XP_008449736.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X2
           [Cucumis melo]
          Length = 797

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 44/84 (52%), Positives = 58/84 (69%)
 Frame = -3

Query: 315 TMEKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAW 136
           T++ +   ++ +  E N+  D S     K+G VYIPPFKL +M   VQDKSS+EYQR+ W
Sbjct: 194 TIDHRQPHRQEKQTENNLNPDSSNLG--KSGGVYIPPFKLARMMKEVQDKSSIEYQRLTW 251

Query: 135 DALKESINGLVNKVNGEMIRNFIP 64
           DAL++SINGLVNKVN   I+N IP
Sbjct: 252 DALRKSINGLVNKVNATNIKNIIP 275


>ref|XP_013676847.1| pre-mRNA-splicing factor CWC22 homolog isoform X2 [Brassica napus]
          Length = 841

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 245 EEKSEVAKPKLPELN-PSDSNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 303

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 304 LRKSINGLVNKVNASNIKNIIP 325


>ref|XP_008449735.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1
           [Cucumis melo]
          Length = 847

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 44/84 (52%), Positives = 58/84 (69%)
 Frame = -3

Query: 315 TMEKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAW 136
           T++ +   ++ +  E N+  D S     K+G VYIPPFKL +M   VQDKSS+EYQR+ W
Sbjct: 244 TIDHRQPHRQEKQTENNLNPDSSNLG--KSGGVYIPPFKLARMMKEVQDKSSIEYQRLTW 301

Query: 135 DALKESINGLVNKVNGEMIRNFIP 64
           DAL++SINGLVNKVN   I+N IP
Sbjct: 302 DALRKSINGLVNKVNATNIKNIIP 325


>ref|XP_022554626.1| pre-mRNA-splicing factor CWC22 homolog isoform X1 [Brassica napus]
          Length = 854

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 258 EEKSEVAKPKLPELN-PSDSNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 316

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 317 LRKSINGLVNKVNASNIKNIIP 338


>ref|XP_013651028.1| LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
           [Brassica napus]
          Length = 569

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 33  EEKSEVAKPKLPELN-SSDSNAIALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 91

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 92  LRKSINGLVNKVNASNIKNIIP 113


>ref|XP_010441342.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Camelina sativa]
          Length = 602

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 6/89 (6%)
 Frame = -3

Query: 312 MEKKSCLKRNRSNEKNVKSDKSKRT------NTKTGEVYIPPFKLDQMTSNVQDKSSVEY 151
           ME +  ++R R ++ +     S+R         KTG VYIPPFKL +M ++V+DKSSVEY
Sbjct: 7   METEHVVRRVRVSDDHENRKSSRRDLDIIGGGDKTGGVYIPPFKLGRMMNDVKDKSSVEY 66

Query: 150 QRMAWDALKESINGLVNKVNGEMIRNFIP 64
           QR+ WDAL++SINGLVNKVN   I+N IP
Sbjct: 67  QRLTWDALRKSINGLVNKVNASNIKNVIP 95


>ref|XP_013651027.1| LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
           [Brassica napus]
          Length = 623

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 33  EEKSEVAKPKLPELN-SSDSNAIALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 91

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 92  LRKSINGLVNKVNASNIKNIIP 113


>ref|XP_018807479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Juglans regia]
          Length = 824

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = -3

Query: 312 MEKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWD 133
           +E+    ++ R  E NV +D S     K+G VYIPPFKL +M   V+DKSSVEYQR+ WD
Sbjct: 222 LEESKPQRQPRLQEGNVNADASNLG--KSGGVYIPPFKLARMMKEVEDKSSVEYQRLTWD 279

Query: 132 ALKESINGLVNKVNGEMIRNFIP 64
           AL++SINGLVNKVN   I+N IP
Sbjct: 280 ALRKSINGLVNKVNAANIKNIIP 302


>ref|XP_006389848.1| pre-mRNA-splicing factor CWC22 homolog [Eutrema salsugineum]
 gb|ESQ27134.1| hypothetical protein EUTSA_v10018086mg [Eutrema salsugineum]
          Length = 935

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS + + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 336 EEKSEVVKPKLPELN-PSDNNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 394

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 395 LRKSINGLVNKVNASNIKNIIP 416


>emb|CDY49736.1| BnaA02g19360D [Brassica napus]
          Length = 796

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 47/82 (57%), Positives = 57/82 (69%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS   + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 236 EEKSEAAKPKLPELN-PSDSNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 294

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 295 LRKSINGLVNKVNASNIKNIIP 316


>ref|XP_013620939.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Brassica
           oleracea var. oleracea]
 ref|XP_013620940.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Brassica
           oleracea var. oleracea]
          Length = 854

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 47/82 (57%), Positives = 57/82 (69%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E KS + + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 258 EDKSEVAKPKLPELN-PSDSNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 316

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 317 LRKSINGLVNKVNASNIKNIIP 338


>ref|XP_009128380.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Brassica rapa]
          Length = 859

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 47/82 (57%), Positives = 57/82 (69%)
 Frame = -3

Query: 309 EKKSCLKRNRSNEKNVKSDKSKRTNTKTGEVYIPPFKLDQMTSNVQDKSSVEYQRMAWDA 130
           E+KS   + +  E N  SD +     KTG VYIPPFKL +M   V+DKSSVEYQR+ WDA
Sbjct: 263 EEKSEAAKPKLPELN-PSDSNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDA 321

Query: 129 LKESINGLVNKVNGEMIRNFIP 64
           L++SINGLVNKVN   I+N IP
Sbjct: 322 LRKSINGLVNKVNASNIKNIIP 343


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