BLASTX nr result

ID: Chrysanthemum21_contig00042759 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00042759
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH87027.1| Homeodomain-like protein [Cynara cardunculus var....   132   5e-35
ref|XP_022033254.1| transcription factor MYB52-like [Helianthus ...    94   4e-20
gb|KVH98789.1| hypothetical protein Ccrd_022983 [Cynara carduncu...    63   2e-08
ref|XP_023755736.1| transcription factor MYB52-like [Lactuca sat...    55   8e-06

>gb|KVH87027.1| Homeodomain-like protein [Cynara cardunculus var. scolymus]
          Length = 272

 Score =  132 bits (333), Expect = 5e-35
 Identities = 70/123 (56%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +1

Query: 4   SWNFIRPTSMLAAKRSSSMNMIGKQQGKNSFGSLIYHDGNTQCSNSSLDHSFFCNYYGGN 183
           SW+ + P++M AA+RSSS+  IGK++GK  F S +YH  N++ SNSS DHSFF NY G  
Sbjct: 151 SWSCMIPSTMSAAERSSSIEFIGKEEGKGCFNSRMYHHSNSEVSNSSPDHSFFRNYVGVY 210

Query: 184 RVSSDSQSYKTVTYASGFRS-NHNLQSVVKMQETSKQEKEDDKAAIDHDDIPFIDFLGVG 360
           RV+SD Q+ K  T+ S F S   NLQS+VK+++T +QE+E+D+  IDH DIPFIDFLGVG
Sbjct: 211 RVASDCQARKKATFLSPFGSCCRNLQSLVKIRDTIQQERENDE-TIDHKDIPFIDFLGVG 269

Query: 361 ISS 369
           ISS
Sbjct: 270 ISS 272


>ref|XP_022033254.1| transcription factor MYB52-like [Helianthus annuus]
 gb|OTG28227.1| putative homeodomain-like protein [Helianthus annuus]
          Length = 265

 Score = 94.0 bits (232), Expect = 4e-20
 Identities = 59/123 (47%), Positives = 74/123 (60%)
 Frame = +1

Query: 1   NSWNFIRPTSMLAAKRSSSMNMIGKQQGKNSFGSLIYHDGNTQCSNSSLDHSFFCNYYGG 180
           +SW  +RP+ MLAAKRS  M+ IGKQ         + H+  TQ S+SSLDHSF  NY+G 
Sbjct: 163 SSWPLMRPSIMLAAKRSFPMDCIGKQ---------VDHNSKTQISSSSLDHSFARNYFG- 212

Query: 181 NRVSSDSQSYKTVTYASGFRSNHNLQSVVKMQETSKQEKEDDKAAIDHDDIPFIDFLGVG 360
                  Q+YK VTY+  F    NLQ  V + E   +E E+ +  + H DIPFIDFLGVG
Sbjct: 213 ------YQTYKKVTYSCPF---GNLQPSVTITEIDTREPEEVE-TLSHKDIPFIDFLGVG 262

Query: 361 ISS 369
           ISS
Sbjct: 263 ISS 265


>gb|KVH98789.1| hypothetical protein Ccrd_022983 [Cynara cardunculus var. scolymus]
          Length = 311

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
 Frame = +1

Query: 1   NSWNFIRPTSMLAAKRSSSMNMIGKQQGKNSFGSLIYHDG--------NTQCSN------ 138
           +SW+F  PT+MLAA RS S   +      + F S ++H          N   SN      
Sbjct: 181 SSWSFASPTTMLAANRSPSSGDLTT----DCFSSRMHHHSLSDHFTSRNYLSSNGGYRDT 236

Query: 139 SSLDHSFFCNYYGGNRVSSDSQSYKTVTYASGFRSNHNLQSVVKMQETSKQEKEDDKAAI 318
           S+  H F    +  N + +   S++TV       S +NL   V+     +Q KE+++ AI
Sbjct: 237 SAYGHQFHNRVHFSNPIEN---SHETVLKRQLVSSENNLPMPVRSTAIFEQHKEEEEEAI 293

Query: 319 DH-DDIPFIDFLGVGISS 369
            H D++PFIDFLGVG+SS
Sbjct: 294 KHKDEVPFIDFLGVGLSS 311


>ref|XP_023755736.1| transcription factor MYB52-like [Lactuca sativa]
 gb|PLY91572.1| hypothetical protein LSAT_1X9561 [Lactuca sativa]
          Length = 327

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
 Frame = +1

Query: 1   NSWNFIRPTSMLAAKRSSSMNMIG----KQQGKNSFGSLIYHDGNTQCSNSSLDHSFFCN 168
           +SW+F  PTS + A  + S++ I      ++    F S   H  +    N++  +   C+
Sbjct: 183 SSWSFTSPTSTMIATHNRSLSSIDLSLTARREDTDFCSSRLHHHSLSDQNTAFQNYLSCS 242

Query: 169 YYGGNRVSS--DSQSYKTVTYASGFRSN----------------HNLQSVVKMQETSKQE 294
             GG+R +     Q +  V ++S F+S                 +N+Q+ VK   T ++ 
Sbjct: 243 N-GGHRDTRAYGQQCHHRVIFSSPFQSTTHDHAVLKRELLVSSKNNMQTQVKAIATLEKH 301

Query: 295 KEDDKAAIDHDD-IPFIDFLGVGISS 369
           KE+D+     DD +PFIDFLGVGISS
Sbjct: 302 KEEDETTEYKDDHVPFIDFLGVGISS 327


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