BLASTX nr result
ID: Chrysanthemum21_contig00042443
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00042443
(690 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTG14868.1| putative zinc finger, CCHC-type [Helianthus annuus] 331 e-101
gb|OTG19914.1| putative ribonuclease H-like domain-containing pr... 303 2e-91
gb|OTG24610.1| putative ribonuclease H-like domain-containing pr... 300 1e-90
gb|OTF88012.1| putative zinc finger, CCHC-type [Helianthus annuus] 292 1e-87
gb|OTF88164.1| putative zinc finger, CCHC-type [Helianthus annuus] 290 4e-87
gb|KYP64614.1| Retrovirus-related Pol polyprotein from transposo... 271 3e-80
gb|KYP63355.1| Retrovirus-related Pol polyprotein from transposo... 258 3e-76
gb|KYP54064.1| Retrovirus-related Pol polyprotein from transposo... 258 1e-75
gb|KYP72965.1| Retrovirus-related Pol polyprotein from transposo... 238 1e-75
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 254 2e-74
emb|CBI36090.3| unnamed protein product, partial [Vitis vinifera] 247 7e-72
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] 243 1e-70
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 238 1e-68
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 231 3e-66
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 206 3e-57
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 202 7e-56
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 201 1e-55
gb|PKU59058.1| Retrovirus-related Pol polyprotein from transposo... 199 4e-55
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 197 2e-54
gb|PKU66732.1| Retrovirus-related Pol polyprotein from transposo... 197 3e-54
>gb|OTG14868.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1386
Score = 331 bits (848), Expect = e-101
Identities = 156/223 (69%), Positives = 183/223 (82%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHK 492
QDR TK+VLA+G+C++ GLY+LQ AL++S+ PKASFE WHSRLGHV++D +S L K
Sbjct: 394 QDRHTKQVLARGRCEN-GLYILQPGHHALVSSSSRPKASFEVWHSRLGHVHFDVISILQK 452
Query: 491 HGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNF 312
G+LS T+LLPKP C CQ+AKS +LPFELN+KRA +PL+LIHCD+WGPSPV S D N+
Sbjct: 453 LGILSITSLLPKPVTCRPCQLAKSQRLPFELNNKRALHPLDLIHCDLWGPSPVVSVD-NY 511
Query: 311 RYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRV 132
RYY+ FVDDHSRF W+YPL KS+ YK + +F FVQTQFS KIKVFQSDGGTEFVNH V
Sbjct: 512 RYYVAFVDDHSRFCWIYPLRLKSEFYKVLTIFMKFVQTQFSRKIKVFQSDGGTEFVNHNV 571
Query: 131 RDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
R LFE NGT HRLSCPYTP QN R ERKHRHIVETGLAM+FNA
Sbjct: 572 RSLFEENGTFHRLSCPYTPQQNGRVERKHRHIVETGLAMMFNA 614
>gb|OTG19914.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1555
Score = 303 bits (776), Expect = 2e-91
Identities = 143/223 (64%), Positives = 178/223 (79%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHK 492
QDR TK+ LA+G C + GLYVL+ + +AL+A++ PKASFE WHSRLGHVN+DTLS L
Sbjct: 410 QDRQTKKTLARG-CREDGLYVLRQTHEALVATSSCPKASFELWHSRLGHVNFDTLSVLKN 468
Query: 491 HGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNF 312
+G LSFT++LPKPG+C C++AK+ + PF +N KRA+ PLE+IHCD+WGPSP++S D NF
Sbjct: 469 NGSLSFTSVLPKPGLCSPCELAKAKRQPFSVNDKRASLPLEIIHCDLWGPSPIKSVD-NF 527
Query: 311 RYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRV 132
YY+ FVDD+SRF+W+YPL KS A+ +F FVQ Q S IK FQSDGGTEF+N+RV
Sbjct: 528 VYYVAFVDDYSRFTWIYPLRAKSQFLDALCIFIPFVQNQISTTIKTFQSDGGTEFINNRV 587
Query: 131 RDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
R LFE +G LHR+SCPYTP QN R ERKHRHIVETGLAMLF+A
Sbjct: 588 RYLFEQHGILHRVSCPYTPQQNGRVERKHRHIVETGLAMLFHA 630
>gb|OTG24610.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1353
Score = 300 bits (769), Expect = 1e-90
Identities = 141/223 (63%), Positives = 177/223 (79%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHK 492
QDR TK+ LA+G C + GLYVL+ + +AL+ ++ PKASFE WHSRLGHVN+DTLS L
Sbjct: 380 QDRQTKKTLARG-CREDGLYVLRQTHEALVTTSSCPKASFELWHSRLGHVNFDTLSMLKN 438
Query: 491 HGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNF 312
+G LSFT++LPKPG+C C++AK+ + PF +N K A+ PLE+IHCD+WGPS ++S D NF
Sbjct: 439 NGSLSFTSVLPKPGLCSPCELAKAKRQPFSVNDKHASLPLEIIHCDLWGPSLIKSVD-NF 497
Query: 311 RYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRV 132
YY+ FVDD+SRF+W+YPL KS + A+ +F FVQ QFS IK FQSDGGTEF+N+RV
Sbjct: 498 VYYVAFVDDYSRFTWIYPLRAKSQFFDALCIFIPFVQNQFSTTIKTFQSDGGTEFINNRV 557
Query: 131 RDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
R LFE +G LHR+SCPYTP QN R ERKHRHIVETGLAMLF+A
Sbjct: 558 RHLFEQHGILHRVSCPYTPQQNGRVERKHRHIVETGLAMLFHA 600
>gb|OTF88012.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1400
Score = 292 bits (747), Expect = 1e-87
Identities = 139/225 (61%), Positives = 171/225 (76%), Gaps = 2/225 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIAS--NKTPKASFETWHSRLGHVNYDTLSYL 498
QDR TK +LA+G C++ GLYVL+ A +AS N KASFE WH RLGHV++DT+S L
Sbjct: 396 QDRKTKEILAKGTCEN-GLYVLREGNHAFVASYSNHHLKASFERWHERLGHVSFDTISRL 454
Query: 497 HKHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDD 318
H+HG L T+LLPKP +C CQ++KSH+LPF LN+KR+ + L+LIHCD+WGPSPV S
Sbjct: 455 HRHGSLFVTSLLPKPNICSPCQLSKSHRLPFGLNNKRSEHALDLIHCDLWGPSPVAS-SY 513
Query: 317 NFRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNH 138
+RYY +F+DD SRF+W YPL +KS+ Y A+ +F FVQ Q S KIK FQSDGGTEF NH
Sbjct: 514 GYRYYAIFIDDFSRFTWFYPLKQKSEFYDALLIFAPFVQNQLSRKIKTFQSDGGTEFTNH 573
Query: 137 RVRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
RV+ F +G HRLSCP+TP QN RAERKHRHI ETGLAMLFN+
Sbjct: 574 RVQKFFHDHGIHHRLSCPHTPEQNGRAERKHRHITETGLAMLFNS 618
>gb|OTF88164.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1358
Score = 290 bits (743), Expect = 4e-87
Identities = 141/222 (63%), Positives = 172/222 (77%)
Frame = -2
Query: 668 DRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHKH 489
DR TK+ +A+G C + GLYVL+ + +AL++S+ PKASFE WHSRLGHVN+D +S L +
Sbjct: 369 DRRTKQTIAKG-CREDGLYVLRDNHEALVSSHSCPKASFEIWHSRLGHVNFDVVSLLKNN 427
Query: 488 GLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNFR 309
G LSFT++LPKPG+C C ELN+KRA++PLELIHCD+WGPS V++ D NF
Sbjct: 428 GSLSFTSVLPKPGLCSPC----------ELNNKRASSPLELIHCDLWGPSSVKTVD-NFS 476
Query: 308 YYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRVR 129
YY+ FVDD+SRF+WLYPL KSD +A+ + FVQTQFS KIK FQSDGGTEF N+RVR
Sbjct: 477 YYVAFVDDYSRFTWLYPLRAKSDFVEALSISIPFVQTQFSSKIKTFQSDGGTEFANNRVR 536
Query: 128 DLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
LFE NGT R+SCPYTP QN R ERKHRHIVETGLAMLF+A
Sbjct: 537 KLFEQNGTFQRMSCPYTPQQNGRVERKHRHIVETGLAMLFHA 578
>gb|KYP64614.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1291
Score = 271 bits (692), Expect = 3e-80
Identities = 130/224 (58%), Positives = 169/224 (75%), Gaps = 1/224 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA-SNKTPKASFETWHSRLGHVNYDTLSYLH 495
Q+R T RVLA+G+CD QGLYV+ PQAL+ S+ P+ASFE WHSRLGHVN+D ++ L+
Sbjct: 309 QNRKTGRVLARGRCD-QGLYVMDQGPQALLTTSSSLPRASFELWHSRLGHVNFDVINKLN 367
Query: 494 KHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDN 315
K G L+ +++LPKP C +CQMAKS +L F N+KRA+ L+LIHCD+WGPSPV S
Sbjct: 368 KQGYLNVSSILPKPICCTTCQMAKSKRLVFYDNNKRASAVLDLIHCDLWGPSPVASVA-G 426
Query: 314 FRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHR 135
+ Y+++FVDD SRF+W YPL KSD Y + F +FV+ QFS IKVFQSD GTEF N++
Sbjct: 427 YSYFVIFVDDFSRFTWFYPLRHKSDFYDVLVRFKVFVENQFSRFIKVFQSDNGTEFTNNK 486
Query: 134 VRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
V+DLF ++G LHR SCP+T QN R ERKHRH++E GLAML+ +
Sbjct: 487 VQDLFASSGVLHRFSCPHTQAQNGRVERKHRHVLEIGLAMLYQS 530
>gb|KYP63355.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1040
Score = 258 bits (659), Expect = 3e-76
Identities = 124/224 (55%), Positives = 165/224 (73%), Gaps = 1/224 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA-SNKTPKASFETWHSRLGHVNYDTLSYLH 495
Q+R T RVLA+G+CD QGLYV+ PQAL+ S+ P+A FE WHS LG VN+D ++ L+
Sbjct: 279 QNRKTGRVLARGRCD-QGLYVMDQGPQALLTTSSSLPRACFELWHSSLGRVNFDVINKLN 337
Query: 494 KHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDN 315
+ G L+ +++LP P C +CQMAKS +L F N+KRA+ L+LIHCD+WGPSPV S
Sbjct: 338 QQGYLNVSSILPNPIYCTTCQMAKSKRLVFYDNNKRASAVLDLIHCDLWGPSPVASVA-G 396
Query: 314 FRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHR 135
+ Y+++FVDD SRF+W YPL KS+ Y + F +FV+ QFS IKVFQSD GTEF N++
Sbjct: 397 YSYFVIFVDDFSRFTWFYPLRHKSNFYDVLVRFKVFVENQFSRFIKVFQSDNGTEFTNNK 456
Query: 134 VRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
V+DLF ++G LHR SCP+T QN R ERKHRH++E GLAML+ +
Sbjct: 457 VQDLFASSGVLHRFSCPHTQAQNGRVERKHRHVLEIGLAMLYQS 500
>gb|KYP54064.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1683
Score = 258 bits (659), Expect = 1e-75
Identities = 124/224 (55%), Positives = 166/224 (74%), Gaps = 1/224 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA-SNKTPKASFETWHSRLGHVNYDTLSYLH 495
Q+R T RVLA+G+CD QGLYV+ PQAL+ S+ P+ASFE WHSRLGHVN+D ++ L+
Sbjct: 221 QNRKTGRVLARGRCD-QGLYVMDQGPQALLTTSSSLPRASFELWHSRLGHVNFDVINKLN 279
Query: 494 KHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDN 315
+ G L+ +++LPKP C +CQMAKS +L F N+KRA+ L+LIHCD+WGPSPV +
Sbjct: 280 QQGYLNVSSILPKPVYCTTCQMAKSKRLFFYDNNKRASTVLDLIHCDLWGPSPV-AFVAG 338
Query: 314 FRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHR 135
+ Y+++FVDD SRF+W Y L KS Y + F +FV+ QFS IKVFQSD GTEF N++
Sbjct: 339 YSYFVIFVDDFSRFTWFYLLRHKSYFYDVLVRFKVFVENQFSQFIKVFQSDNGTEFTNNK 398
Query: 134 VRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
V+DLF ++G HR SCP+T QN R E+KHRH++E GLAML+ +
Sbjct: 399 VQDLFASSGVFHRFSCPHTQAQNGRVEQKHRHVLEIGLAMLYQS 442
>gb|KYP72965.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 261
Score = 238 bits (607), Expect = 1e-75
Identities = 115/199 (57%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA-SNKTPKASFETWHSRLGHVNYDTLSYLH 495
Q+R T RVLA+G+CD QGLYV+ PQAL+ S+ P+ASFE WHSRLGHVN+D ++ L+
Sbjct: 63 QNRKTGRVLARGRCD-QGLYVMDQGPQALLTTSSSLPRASFELWHSRLGHVNFDVINKLN 121
Query: 494 KHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDN 315
K G L+ +++LPKP C +CQMAKS +L F N+KRA+ L+LIHCD+WGPSPV S
Sbjct: 122 KQGYLNVSSILPKPICCTTCQMAKSKRLVFYDNNKRASAVLDLIHCDLWGPSPVAS-VAG 180
Query: 314 FRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHR 135
+ Y+++FVDD SRF+W YPL KSD Y + F +FV+ QFS IKVFQSD GTEF N++
Sbjct: 181 YSYFVIFVDDFSRFTWFYPLRHKSDFYDVLVRFKVFVENQFSRFIKVFQSDNGTEFTNNK 240
Query: 134 VRDLFEANGTLHRLSCPYT 78
V+DLF ++G LHR SCP+T
Sbjct: 241 VQDLFASSGVLHRFSCPHT 259
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 254 bits (649), Expect = 2e-74
Identities = 121/224 (54%), Positives = 162/224 (72%), Gaps = 2/224 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA--SNKTPKASFETWHSRLGHVNYDTLSYL 498
Q+R T RV+A GK D GLYVL+ A I+ NK+ +AS++ WH+RLGHVNY +S+L
Sbjct: 387 QNRQTGRVVATGKRDG-GLYVLECGNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFL 445
Query: 497 HKHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDD 318
+K G LS T+LLP P +C +CQ+AK+H+LP+ N R+++ L+LIHCD+WGPSP++S+
Sbjct: 446 NKKGHLSLTSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNS- 504
Query: 317 NFRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNH 138
F YY++F+DD+SRF+WLYPL KSD + F FV+ Q S +IKVFQSDGG EF N
Sbjct: 505 GFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNT 564
Query: 137 RVRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFN 6
+ +G H+LSCPYT QN RAERKHRH+ ETGLA+LF+
Sbjct: 565 CFKAHLRTSGIHHQLSCPYTXAQNGRAERKHRHVTETGLALLFH 608
>emb|CBI36090.3| unnamed protein product, partial [Vitis vinifera]
Length = 1273
Score = 247 bits (631), Expect = 7e-72
Identities = 119/225 (52%), Positives = 160/225 (71%), Gaps = 2/225 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA--SNKTPKASFETWHSRLGHVNYDTLSYL 498
Q+R T RV+A GK D GLYVL+ A I+ NK+ +AS++ WH+RLGHVNY +S+L
Sbjct: 963 QNRQTGRVVATGKRDG-GLYVLERGNSAFISVLKNKSLRASYDLWHARLGHVNYFVISFL 1021
Query: 497 HKHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDD 318
HK G LS +LLP P +C +CQ+AK+H+LP+ N R+++ L+LIHCD+ GPSP++S+
Sbjct: 1022 HKKGHLSLMSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGPSPIKSNS- 1080
Query: 317 NFRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNH 138
F YY++F+DD+SRF+WLYPL KSD + F FV+ Q +IKVFQSDGG EF N
Sbjct: 1081 GFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFKKFVENQHFARIKVFQSDGGAEFTNT 1140
Query: 137 RVRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
+ +G H+LSCPYTP QN RAERKHRH+ ETGL +LF++
Sbjct: 1141 CFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLTLLFHS 1185
>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
Length = 1207
Score = 243 bits (621), Expect = 1e-70
Identities = 117/221 (52%), Positives = 158/221 (71%), Gaps = 2/221 (0%)
Frame = -2
Query: 659 TKRVLAQGKCDDQGLYVLQSSPQALIA--SNKTPKASFETWHSRLGHVNYDTLSYLHKHG 486
T RV+A GK D GLYVL+ A I+ NK+ +AS++ WH+RLGHVNY +S+L+K
Sbjct: 353 TGRVVATGKRDG-GLYVLERDNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKX 411
Query: 485 LLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNFRY 306
LS T+LLP P +C +CQ AK+H+LP+ N R+++ L+LIHCD+WGPSP++S+ +F Y
Sbjct: 412 QLSLTSLLPSPSLCSTCQFAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNS-SFLY 470
Query: 305 YIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRVRD 126
Y++F+DD+SRF+WLYPL KSD + F FV+ Q S +IKVFQSDG EF N +
Sbjct: 471 YVIFIDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGVVEFTNTCFKA 530
Query: 125 LFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
+G H+LS PYTP QN RAERKHRH+ ETGLA+LF++
Sbjct: 531 HLHTSGIHHQLSYPYTPAQNGRAERKHRHVTETGLALLFHS 571
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 238 bits (608), Expect = 1e-68
Identities = 117/225 (52%), Positives = 155/225 (68%), Gaps = 2/225 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQAL--IASNKTPKASFETWHSRLGHVNYDTLSYL 498
Q+R T +A+GK GLYVL+ A + NK ASFE WH+RLGHVN+ LS L
Sbjct: 369 QNRITGMAVAKGKRAG-GLYVLERGHSAFASVLRNKNLHASFELWHARLGHVNHSILSLL 427
Query: 497 HKHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDD 318
+K G L T+LLP P +C +CQ+AKSH+LPF N R+ L L+HCD+WG +PV+S+
Sbjct: 428 NKKGQLFLTSLLPTPSLCSTCQLAKSHRLPFSSNTTRSNVVLGLVHCDIWGLAPVKSNL- 486
Query: 317 NFRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNH 138
F YY++F+DD+SRF+WLYPL KSD + F V+ Q+S KIK+FQSDGG EF ++
Sbjct: 487 GFNYYVLFIDDYSRFTWLYPLKLKSDFFDIFLQFQKLVENQYSTKIKIFQSDGGAEFTSN 546
Query: 137 RVRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
R + + G H++SCPYTP QN RAERKHRH+ ETGLA+LF++
Sbjct: 547 RFQSHLQQFGIHHQMSCPYTPSQNGRAERKHRHVTETGLALLFHS 591
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 231 bits (590), Expect = 3e-66
Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 2/225 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIA--SNKTPKASFETWHSRLGHVNYDTLSYL 498
Q+R T R +A GK D GLYVL+ A I+ NK+ +AS++ WH+RLGH
Sbjct: 379 QNRQTGRXVATGKRDG-GLYVLERGNSAFISVLKNKSLRASYDLWHARLGH--------- 428
Query: 497 HKHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDD 318
LS T+LLP P +C +CQ+AK+H+LP+ N R+++ L+LIHCD+WGPSP++S+
Sbjct: 429 -----LSLTSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNS- 482
Query: 317 NFRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNH 138
F YY++F+DD+SRF+WLYPL KSD + F FV+ Q S +IKVFQSDGG EF N
Sbjct: 483 GFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNT 542
Query: 137 RVRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
+ +G H+LSCPYTP QN RAERKHRH+ ETGLA+LF++
Sbjct: 543 CFKAHLRTSGIHHQLSCPYTPAQNGRAERKHRHVTETGLALLFHS 587
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 206 bits (523), Expect = 3e-57
Identities = 103/222 (46%), Positives = 139/222 (62%)
Frame = -2
Query: 668 DRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHKH 489
D T++V+ G + GLYVL++ + SN+ A+ E WH RLGH N L +L
Sbjct: 416 DLQTQKVVTTGPRRN-GLYVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNS 474
Query: 488 GLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNFR 309
+ P VC CQM KS +LPF ++ R +PL+ IHCD+WGPSPV S+ +
Sbjct: 475 KAIQINKSRTSP-VCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQ-GLK 532
Query: 308 YYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRVR 129
YY +FVDD+SR+SW YPL KS+ F V+ Q + KIKVFQSDGG EFV+++++
Sbjct: 533 YYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLK 592
Query: 128 DLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
+G HR+SCPYTP QN AERKHRH+VE GL+MLF++
Sbjct: 593 THLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHS 634
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 202 bits (513), Expect = 7e-56
Identities = 104/222 (46%), Positives = 140/222 (63%)
Frame = -2
Query: 668 DRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHKH 489
D TT++V+++G ++ GLY+L++S + SN+ AS ETWH RLGH N L L
Sbjct: 418 DLTTQKVVSKGPRNN-GLYMLENSEFVALYSNRQCAASMETWHHRLGHSNSKILQQLLTR 476
Query: 488 GLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNFR 309
+ P VC CQM KS +L F + RA PL+ +HCD+WGPSPV S+ F+
Sbjct: 477 KEIQVNKSRTSP-VCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQ-GFK 534
Query: 308 YYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRVR 129
YY VFVDD SRFSW +PL KS + V+ Q KIK FQSDGG EF +++++
Sbjct: 535 YYAVFVDDFSRFSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLK 594
Query: 128 DLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
+ F +G HR+SCPYTP QN AERKHRH+VE GL+ML+++
Sbjct: 595 EHFREHGIHHRISCPYTPQQNGVAERKHRHLVELGLSMLYHS 636
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 201 bits (511), Expect = 1e-55
Identities = 107/222 (48%), Positives = 137/222 (61%)
Frame = -2
Query: 668 DRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHKH 489
D T++V+++G + GLYVL++ SN+ AS E WH RLGH N L L
Sbjct: 419 DINTQKVVSKGPRSN-GLYVLENQEFVAFYSNRQCAASEEIWHHRLGHSNSRILQQLKSS 477
Query: 488 GLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNFR 309
+SF P VC CQM KS KL F ++ R + L IHCD+WGPSPV S F+
Sbjct: 478 KEISFNKSRMSP-VCEPCQMGKSSKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQ-GFK 535
Query: 308 YYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRVR 129
YY+VFVDD+SR+SW YPL KSD + F V+ QF+ KIKVFQSDGG EF ++ ++
Sbjct: 536 YYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMK 595
Query: 128 DLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
G HR+SCPYTP QN AERKHRH VE GL+M+F++
Sbjct: 596 KHLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLSMMFHS 637
>gb|PKU59058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 969
Score = 199 bits (506), Expect = 4e-55
Identities = 100/223 (44%), Positives = 136/223 (60%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHK 492
+D T L G C + GLY + SS Q +I++ KA TWH+RLGH N TL L
Sbjct: 417 KDLMTDNTLLHGPCKE-GLYPIASS-QPIISALSANKAPSATWHNRLGHPNNQTLRLLAS 474
Query: 491 HGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNF 312
+ + K C+SC+ K HK PF + R NPLEL+H DVWGPSP+ S+ + F
Sbjct: 475 --MQPHLHISVKDLECISCKSCKDHKFPFARSSNRKFNPLELLHSDVWGPSPIASNQE-F 531
Query: 311 RYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRV 132
RYY+ FVDD+S+F+WL+PL KS+V++ ++ QF+ KIK+ ++DGG E++N+
Sbjct: 532 RYYVSFVDDYSQFTWLFPLKNKSEVFETFVKLKQLIENQFNSKIKILRTDGGAEYINNMF 591
Query: 131 RDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
R E NG H+ SCPYTP QN AERKHRHI+E +L A
Sbjct: 592 RKFLETNGIEHQRSCPYTPEQNGVAERKHRHIIEIARTLLHQA 634
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 197 bits (502), Expect = 2e-54
Identities = 100/222 (45%), Positives = 134/222 (60%)
Frame = -2
Query: 668 DRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLHKH 489
D+ TK++L G+ D GLY L+ ++ S + AS E WH RLGH N + L L
Sbjct: 420 DKATKKLLVMGRNRD-GLYSLEEPKLQVLYSTRQNSASSEVWHRRLGHANAEVLHQLASS 478
Query: 488 GLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDNFR 309
+ + K VC +C + KS +LPF L+ A+ PLE IHCD+WGPSP S FR
Sbjct: 479 KSIIIINKVVKT-VCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQ-GFR 536
Query: 308 YYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHRVR 129
YY+VF+D +SRF+W YPL KSD + +F V+ Q KIK+FQ DGG EF++ +
Sbjct: 537 YYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDGGGEFISSQFL 596
Query: 128 DLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAMLFNA 3
+ +G +SCPYTP QN AERKHRHIVE GL+M+F +
Sbjct: 597 KHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQS 638
>gb|PKU66732.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1298
Score = 197 bits (501), Expect = 3e-54
Identities = 98/221 (44%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Frame = -2
Query: 671 QDRTTKRVLAQGKCDDQGLYVLQSSPQALIASNKTPKASFETWHSRLGHVNYDTLSYLH- 495
+D TT R++ +G C D GLY + S + A T ++S + WH+RLGH N T+ Y+
Sbjct: 411 KDMTTDRIILRGPCKD-GLYPIAESSSSSTALQAT-RSSSDVWHNRLGHPNQRTMRYIAI 468
Query: 494 KHGLLSFTALLPKPGVCLSCQMAKSHKLPFELNHKRATNPLELIHCDVWGPSPVESHDDN 315
+ L+ + + K C+SC K HK+PF + R PL L+H DVWGPSPV S+
Sbjct: 469 ANPQLNISCSISK---CVSCSSCKGHKIPFTKSCNRMKTPLALLHSDVWGPSPVMSNQ-G 524
Query: 314 FRYYIVFVDDHSRFSWLYPLSRKSDVYKAIEVFTLFVQTQFSCKIKVFQSDGGTEFVNHR 135
FRYY+ F+DD SR++W++P+ KSDV F +F++ Q KIK+ ++DGGTE+ N+
Sbjct: 525 FRYYVTFIDDFSRYTWIFPIRNKSDVPHIFINFKIFIENQTDYKIKMLRTDGGTEYRNNT 584
Query: 134 VRDLFEANGTLHRLSCPYTPPQNARAERKHRHIVETGLAML 12
+ FE+NG H+ SCPYTP QN AERKHRHI+ET +L
Sbjct: 585 LNHFFESNGIQHQFSCPYTPEQNGVAERKHRHIIETTRTLL 625