BLASTX nr result

ID: Chrysanthemum21_contig00042126 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00042126
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08271.1| Leucine-rich repeat, cysteine-containing subtype ...    44   3e-06
ref|XP_023736637.1| coronatine-insensitive protein 1-like [Lactu...    42   9e-06

>gb|KVI08271.1| Leucine-rich repeat, cysteine-containing subtype [Cynara
           cardunculus var. scolymus]
          Length = 582

 Score = 43.5 bits (101), Expect(2) = 3e-06
 Identities = 23/75 (30%), Positives = 45/75 (60%)
 Frame = -2

Query: 367 IRDLDLELLARTRGKDLRVLKIMKYNWFSSMDYWKSHEV***FENLIFRKMCVGYTYGKW 188
           +RD D++LL RTRG++LRVLK+   + FS+    +  ++    + L  ++  +    G+W
Sbjct: 125 VRDSDIDLLTRTRGQELRVLKLDLCSGFSTDGLLQIGKLCNNLKTLYLQESLIVEKDGEW 184

Query: 187 IYESVFNNTNIESMD 143
           ++E   +N  +ES++
Sbjct: 185 LHELALHNKAMESLN 199



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -3

Query: 102 LFLKKKNCSQSLVSLKFTIVEAIDLVDFCSYVVR 1
           L L  KNCS SLVS+K +  +  DLVDF  Y V+
Sbjct: 213 LELIAKNCSGSLVSVKISECDVTDLVDFFRYAVK 246


>ref|XP_023736637.1| coronatine-insensitive protein 1-like [Lactuca sativa]
 gb|PLY71603.1| hypothetical protein LSAT_2X45640 [Lactuca sativa]
          Length = 589

 Score = 42.4 bits (98), Expect(2) = 9e-06
 Identities = 24/75 (32%), Positives = 43/75 (57%)
 Frame = -2

Query: 367 IRDLDLELLARTRGKDLRVLKIMKYNWFSSMDYWKSHEV***FENLIFRKMCVGYTYGKW 188
           +RD D++LL RTRG++LRVLK+   + FS+    +  +       L  ++  +    G+W
Sbjct: 125 VRDSDIDLLTRTRGQELRVLKLDLCSGFSTDGLLQIGKRCNNLRILYLQESLIVEKDGEW 184

Query: 187 IYESVFNNTNIESMD 143
           ++E    NT +ES++
Sbjct: 185 LHELALRNTAMESLN 199



 Score = 34.7 bits (78), Expect(2) = 9e-06
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -3

Query: 102 LFLKKKNCSQSLVSLKFTIVEAIDLVDFCSYVVR 1
           L L  KNCS+SLVS+K +  +  DL DF +Y V+
Sbjct: 213 LELIAKNCSESLVSVKISECDLTDLSDFFNYAVK 246


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