BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00042055
         (905 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG15986.1| putative ribonuclease H-like domain-containing pr...   224   2e-72
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   184   3e-56
gb|PRQ16261.1| putative RNA-directed DNA polymerase [Rosa chinen...   170   6e-55
ref|XP_009368272.2| PREDICTED: uncharacterized protein LOC103957...   171   8e-55
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   176   1e-54
ref|XP_021829321.1| uncharacterized protein LOC110769611, partia...   166   1e-54
gb|PRQ50961.1| putative RNA-directed DNA polymerase [Rosa chinen...   169   3e-54
gb|PRQ31173.1| putative RNA-directed DNA polymerase [Rosa chinen...   169   4e-54
ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807...   176   9e-54
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   164   1e-53
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   164   1e-53
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   164   1e-53
ref|XP_020158271.1| uncharacterized protein LOC109743586 [Aegilo...   169   1e-53
gb|PRQ50596.1| putative RNA-directed DNA polymerase [Rosa chinen...   164   2e-53
ref|XP_008369089.1| PREDICTED: uncharacterized protein LOC103432...   172   3e-53
gb|OMO89784.1| Integrase, catalytic core [Corchorus capsularis]       170   5e-53
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   168   9e-53
gb|PRQ35692.1| putative RNA-directed DNA polymerase [Rosa chinen...   162   9e-53
gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punic...   173   1e-52
ref|XP_020197777.1| uncharacterized protein LOC109783596 [Aegilo...   172   2e-52

>gb|OTG15986.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1320

 Score =  224 bits (572), Expect(2) = 2e-72
 Identities = 132/292 (45%), Positives = 158/292 (54%), Gaps = 32/292 (10%)
 Frame = -1

Query: 905  RLYIARHVRFHEQYFPFLHQPSATPTQSQPDPYFSSFPI--------------------- 789
            R+YIARHVRF E  FPF  Q S T     P PY S++P                      
Sbjct: 769  RIYIARHVRFIEHVFPFSKQTSNTSPVPDPTPYVSAYPTPDLSTTTQPTPPPQSSPTLNS 828

Query: 788  ----------SCCSPTQSATEPVSAPPSAQTHXXXXXXXXXXXXXXXXXXXXXXXXPTES 639
                      S   PT +   P   PP                              T  
Sbjct: 829  PPQPPDSTPPSSNQPTSTPPTPPPPPPPPPPPPPPPAYTYSRKSTRSSTTSAFDQYSTNK 888

Query: 638  LQPLPN-HXXXXXXXXXXXXTRPAHLRQNPPKTKRYDPSAFHATTEPIVTEPTTFSVANK 462
              P+P               TRP +LR NP +TK Y+ S FH +T  + +EPTTF+VAN 
Sbjct: 889  AAPIPPLSTTPPPPSSTTTRTRPPNLRSNPKQTKPYNAS-FHTST--VESEPTTFTVANA 945

Query: 461  DPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKG 282
            DP W+ AM+EEY +L+++GTWTLVP     NVVDCKWVY+LK+D+HG + R+KARLVAKG
Sbjct: 946  DPNWRKAMAEEYSSLVRHGTWTLVPYDPRSNVVDCKWVYRLKKDQHGCVQRHKARLVAKG 1005

Query: 281  FNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHGD*KK 126
            F+QQ GIDY ETFSPVVK TTIRVVLSLAV H W LRQLDVQ AFL+GD K+
Sbjct: 1006 FHQQHGIDYTETFSPVVKATTIRVVLSLAVQHKWPLRQLDVQTAFLYGDLKE 1057



 Score = 77.8 bits (190), Expect(2) = 2e-72
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
            LKETVYL+QPPGFVD   P+H+C L KSLYGLKQAPRAWF RLS
Sbjct: 1055 LKETVYLKQPPGFVDPRYPNHVCRLRKSLYGLKQAPRAWFHRLS 1098


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  184 bits (466), Expect(2) = 3e-56
 Identities = 110/278 (39%), Positives = 144/278 (51%), Gaps = 22/278 (7%)
 Frame = -1

Query: 905  RLYIARHVRFHEQYFPF--LHQPSATPTQSQPDPYFSSFPISCCSPTQSATEPVSAP--- 741
            +LY++RHV+F E  FP+  LH     P  +    +     +S  +PT S  E ++     
Sbjct: 709  KLYVSRHVQFVESVFPYTSLHTTLPRPNSTTISTWIPXI-LSVSTPTSSQQEAITPSAAS 767

Query: 740  ----PSAQTHXXXXXXXXXXXXXXXXXXXXXXXXPTESLQPLPNHXXXXXXXXXXXXTRP 573
                P  +T                          TE   P+P                 
Sbjct: 768  SQGLPLFETTSPPAAPFPHQASSAPQPSPQPSLTTTEPPIPVP----------------- 810

Query: 572  AHLRQNPPKTKRYDPSAFHATTEPI-------------VTEPTTFSVANKDPQWQHAMSE 432
                  PP   R    A +  T+PI              T PT+ S A KD  W+ AMS+
Sbjct: 811  ------PPTQHRMTTRAKNNITKPIQKLNLHTHKPTFQTTTPTSISQALKDQNWRQAMSD 864

Query: 431  EYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYH 252
            EY AL++NGTW LVPP    N+V CKW++++KR+  G+I RYKARLVAKGF+Q+ G+DYH
Sbjct: 865  EYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGVDYH 924

Query: 251  ETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            ETFSPVVKPTT+R+VLS+AVS+GWSLRQLDV NAFL G
Sbjct: 925  ETFSPVVKPTTVRLVLSIAVSNGWSLRQLDVNNAFLQG 962



 Score = 64.3 bits (155), Expect(2) = 3e-56
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRL 7
            L E V++ QPPGFVD   P ++C LHK++YGLKQAPRAW+  L
Sbjct: 964  LSENVFMAQPPGFVDSDHPSYVCKLHKAIYGLKQAPRAWYHEL 1006


>gb|PRQ16261.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 934

 Score =  170 bits (431), Expect(2) = 6e-55
 Identities = 82/139 (58%), Positives = 99/139 (71%)
 Frame = -1

Query: 554 PPKTKRYDPSAFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSN 375
           PP      P         + T   T   A++ P+W+ AM+EE  AL+KN TWTLVPP S+
Sbjct: 387 PPAPAPSHPMVTRLRDGIVQTRALTDGTASQKPEWRAAMTEEINALLKNNTWTLVPPSSS 446

Query: 374 VNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLA 195
            N V CKWV+++KR   G+I RYKARLVAKGF+QQ GIDY ET+SPV+KP TIR VLS+A
Sbjct: 447 QNTVGCKWVFRVKRKSDGSIERYKARLVAKGFHQQQGIDYGETYSPVIKPATIRTVLSIA 506

Query: 194 VSHGWSLRQLDVQNAFLHG 138
           VS GWSLRQLDV+NAFLHG
Sbjct: 507 VSRGWSLRQLDVKNAFLHG 525



 Score = 73.6 bits (179), Expect(2) = 6e-55
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
           L E VY+ QPPGFVD+++P H+C L+K+LYGLKQAPRAWFQR+S
Sbjct: 527 LTEDVYMVQPPGFVDQSRPSHVCKLNKALYGLKQAPRAWFQRMS 570


>ref|XP_009368272.2| PREDICTED: uncharacterized protein LOC103957781 [Pyrus x
           bretschneideri]
          Length = 1880

 Score =  171 bits (433), Expect(2) = 8e-55
 Identities = 109/269 (40%), Positives = 140/269 (52%), Gaps = 13/269 (4%)
 Frame = -1

Query: 905 RLYIARHVRFHEQYFPF----LHQPSATPTQSQPDPYFSSFPISCCSPTQSATEPVSAPP 738
           R+Y++RHV F E  FPF    L + S   T S P      F     SP+ S    +++P 
Sbjct: 157 RVYLSRHVLFDEDSFPFKDITLQKESVHATGSSPSSDLL-FVFPSLSPSHSPV--IASPS 213

Query: 737 SAQTHXXXXXXXXXXXXXXXXXXXXXXXXPTESLQPL--PNHXXXXXXXXXXXXT----R 576
           +AQ                              + PL  PN                   
Sbjct: 214 TAQLLSHDPPSTNITSSVDSIANPSVPPVLNPDIVPLEMPNEQEIISEPEQQPDLSCAPN 273

Query: 575 PAHLRQNPPKTKRYDPS---AFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRALMKNG 405
           P H  Q   K     P+   A H  T     EPT+FS A K  +W++AM  E+ AL ++G
Sbjct: 274 PVHHMQTRSKAGIQKPNPKYALHVVTTDTPVEPTSFSQAVKQQEWRNAMVTEFNALQRSG 333

Query: 404 TWTLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKP 225
           TW LVP   ++N++  KWVYK+KR  +G+I RYKARLVA GF+QQ G+DY ETFSPVVK 
Sbjct: 334 TWNLVPYKPHMNLLPNKWVYKIKRHANGSIDRYKARLVANGFHQQHGVDYGETFSPVVKH 393

Query: 224 TTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
           +TIR+VLSLAVS+ W +RQLDVQNAFLHG
Sbjct: 394 STIRLVLSLAVSNQWPVRQLDVQNAFLHG 422



 Score = 72.4 bits (176), Expect(2) = 8e-55
 Identities = 32/44 (72%), Positives = 35/44 (79%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
           L E VY+RQP GFVD   PHH+C L +SLYGLKQAPRAWFQR S
Sbjct: 424 LAEEVYMRQPVGFVDSQYPHHVCRLQRSLYGLKQAPRAWFQRFS 467


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  176 bits (446), Expect(2) = 1e-54
 Identities = 115/301 (38%), Positives = 147/301 (48%), Gaps = 45/301 (14%)
 Frame = -1

Query: 905  RLYIARHVRFHEQYFPFLH------------------------QPS--ATPTQSQPDPY- 807
            R+YI+RHV+F E  FPF                          QPS    PT S+  P+ 
Sbjct: 721  RVYISRHVQFIEHKFPFASNTTPTDLBQAISTWSSCSPALAAIQPSFFVVPTSSKSFPHQ 780

Query: 806  -------------FSSFPISCCSPTQSATEPVSA---PPSAQTHXXXXXXXXXXXXXXXX 675
                          SS   +  SP  +A+ P+SA   PP                     
Sbjct: 781  APSCTNTGPNQELISSLSPTSSSPPTTASAPLSACDAPPRYDLSLSSLPVSFDSSNISSP 840

Query: 674  XXXXXXXXPTESLQPLPNHXXXXXXXXXXXXTRPAHLRQNPPKTKRYDPSAFHATTEPIV 495
                      +   PLP                  H  +  P  K    ++FH T  P+ 
Sbjct: 841  SLSLSPPTQPQGSNPLPE----PSHRIVTRSQNNIHCPKQFPDFK----TSFHVTKHPLP 892

Query: 494  T--EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHG 321
               EPTT S A KDP+W   M +E  AL +N TW LVPP SN N+V CKWV+++KR+  G
Sbjct: 893  XSLEPTTASQALKDPKWCAXMDDELAALARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDG 952

Query: 320  AITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLH 141
            +I+RYKARLVAKGF+Q+ G+DYH+TFSPVVKPTTIRVVLS+A+S+ W + QLDV N FLH
Sbjct: 953  SISRYKARLVAKGFHQRPGVDYHDTFSPVVKPTTIRVVLSIALSNXWXISQLDVNNXFLH 1012

Query: 140  G 138
            G
Sbjct: 1013 G 1013



 Score = 67.0 bits (162), Expect(2) = 1e-54
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRL 7
            L E VY+ QPPG+VD+A P H+C L K+LYGLKQAPRAW+  L
Sbjct: 1015 LTEDVYMAQPPGYVDQANPTHVCRLQKALYGLKQAPRAWYMEL 1057


>ref|XP_021829321.1| uncharacterized protein LOC110769611, partial [Prunus avium]
          Length = 666

 Score =  166 bits (419), Expect(3) = 1e-54
 Identities = 83/144 (57%), Positives = 98/144 (68%)
 Frame = -1

Query: 569 HLRQNPPKTKRYDPSAFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLV 390
           +L   PP   +Y       T      +PT FS ANK   W+ AM++E  ALM NGTW+LV
Sbjct: 410 NLHPKPPPNPKYTIPHALLTEATSQHKPTCFSEANKHKHWRAAMNDELNALMHNGTWSLV 469

Query: 389 PPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRV 210
           P   ++NVV CKWV+++KR   G I  YK RLVAKGF+QQ G+DY ETFSPVVK TTIR 
Sbjct: 470 PYNPSMNVVGCKWVFRVKRKTDGTIDCYKERLVAKGFHQQEGVDYTETFSPVVKATTIRT 529

Query: 209 VLSLAVSHGWSLRQLDVQNAFLHG 138
           VLS+AVSHGW  RQLDV NAFLHG
Sbjct: 530 VLSIAVSHGWETRQLDVTNAFLHG 553



 Score = 75.5 bits (184), Expect(3) = 1e-54
 Identities = 34/44 (77%), Positives = 36/44 (81%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
           L E VY+ QPPGFVD  KPHH+C LH SLYGLKQAPRAWFQ LS
Sbjct: 555 LNEEVYMIQPPGFVDDTKPHHVCKLHCSLYGLKQAPRAWFQCLS 598



 Score = 22.3 bits (46), Expect(3) = 1e-54
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -3

Query: 708 PTIDPITPASTQPTGGATTSHRITSAPPKSPNTI 607
           P   P  P+++        SH I ++PP + N+I
Sbjct: 337 PIYSPSLPSNSNSISNLN-SHSIVNSPPNNDNSI 369


>gb|PRQ50961.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 811

 Score =  169 bits (429), Expect(2) = 3e-54
 Identities = 106/266 (39%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
 Frame = -1

Query: 905 RLYIARHVRFHEQYFPFLHQPSATPTQSQPDPYFSSFPISCCSPTQSATEPVSAPPSAQT 726
           ++YI+RHV F E  FPF  +PS  P      P+ +  PIS   PT ++   +   P    
Sbjct: 112 KVYISRHVTFDENTFPF-QEPSLQP------PFHN--PISHSQPTSTSVPSILPLPPLPL 162

Query: 725 HXXXXXXXXXXXXXXXXXXXXXXXXPTESLQPLPNHXXXXXXXXXXXXTRPAHLRQNPPK 546
                                    P+ S  P P                P H  Q   K
Sbjct: 163 PTPIITPSPPLPSLPTTPTVHTPSPPSSSPPPPPPPPPLPIRRPRPPAGPPTHNMQTRLK 222

Query: 545 TKRYDPSAFHATTEPIVTE----------PTTFSVANKDPQWQHAMSEEYRALMKNGTWT 396
           +    P AF  T  P V            P TF  A+KDP W  AM EE  AL K  TWT
Sbjct: 223 SGISKPKAF-ITKHPFVGVMLASSPPPKIPNTFLQASKDPNWVAAMKEEIHALHKTSTWT 281

Query: 395 LVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTI 216
           LVPP S+ N+V  KW++++K+   G + RYKARLVA+GF+Q+AG+DY ETFSPV KPTTI
Sbjct: 282 LVPPHSSQNLVGSKWIFRIKQRADGTVDRYKARLVAQGFHQKAGLDYSETFSPVAKPTTI 341

Query: 215 RVVLSLAVSHGWSLRQLDVQNAFLHG 138
           RV+LS+AV + W + QLDV NAFLHG
Sbjct: 342 RVLLSMAVQYDWPISQLDVSNAFLHG 367



 Score = 72.0 bits (175), Expect(2) = 3e-54
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRL 7
           L+ETVY+ QPPGFVD  +P ++C LHKSLYGLKQAPRAW++ L
Sbjct: 369 LQETVYMAQPPGFVDPQRPDYVCQLHKSLYGLKQAPRAWYEEL 411


>gb|PRQ31173.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1468

 Score =  169 bits (427), Expect(2) = 4e-54
 Identities = 78/118 (66%), Positives = 95/118 (80%)
 Frame = -1

Query: 491  EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAIT 312
            EPT +S A+K  +W+ AM +E  ALMKN TW+LVP     N V CKWV+K+KR+  G++ 
Sbjct: 937  EPTCYSQASKKAEWRAAMVDEINALMKNNTWSLVPSSPTQNTVGCKWVFKVKRNPDGSVE 996

Query: 311  RYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            R+KARLVAKGF+QQ GID+HETFSPV+KP TIR V+SLAVS GWSLRQLDV+NAFLHG
Sbjct: 997  RFKARLVAKGFHQQQGIDFHETFSPVIKPATIRTVISLAVSRGWSLRQLDVKNAFLHG 1054



 Score = 72.4 bits (176), Expect(2) = 4e-54
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
            L E VY+ QPPGF+D++ P H+C L+KSLYGLKQAPRAWFQR++
Sbjct: 1056 LTEDVYMTQPPGFIDQSHPTHVCKLNKSLYGLKQAPRAWFQRMT 1099


>ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807900 [Tarenaya
            hassleriana]
          Length = 1047

 Score =  176 bits (447), Expect(2) = 9e-54
 Identities = 112/275 (40%), Positives = 138/275 (50%), Gaps = 18/275 (6%)
 Frame = -1

Query: 905  RLYIARHVRFHEQYFPFL------HQPSATPTQSQPDPYFSSF------PISCCSPTQSA 762
            R++++RHV+FHE  FPF          S  P  S P   F         P+   SP QS 
Sbjct: 440  RVFVSRHVQFHETVFPFSGLTSQSSPSSVEPVSSSPVAPFGRHVTAFQQPLVASSPVQSP 499

Query: 761  TEPVSAPPSAQTHXXXXXXXXXXXXXXXXXXXXXXXXPTESLQPLPNHXXXXXXXXXXXX 582
                S P S                               +    P              
Sbjct: 500  GSGSSPPDSLGLCDSPALLLPADGSARDLDSCPTPADSVSADLIAPESVDVDASVDCVP- 558

Query: 581  TRPAHLRQNPPKTK------RYDPSAFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRA 420
             R  H  Q   K        RY   A  A T  I  EP++ + A KDP W+ AM+EE++A
Sbjct: 559  -RNTHPMQTRSKNNILMPNPRYTLMASVADTSDI--EPSSVTQAIKDPNWRAAMTEEFQA 615

Query: 419  LMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFS 240
            L +N TW LVP     NVV C+WV+++KR   G++ RYKARLVAKGF+Q+ G+DYHETFS
Sbjct: 616  LCRNNTWDLVPSSDASNVVGCRWVFRIKRKPDGSVDRYKARLVAKGFHQRPGVDYHETFS 675

Query: 239  PVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHGD 135
            PVVKPTTIRVVLSLAVS GW+LRQLDV NAFL G+
Sbjct: 676  PVVKPTTIRVVLSLAVSRGWTLRQLDVNNAFLQGN 710



 Score = 63.5 bits (153), Expect(2) = 9e-54
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRL 7
           L E VY+ QPPGF+D A P  +C L K++YGLKQAPRAW+  L
Sbjct: 711 LSEEVYMSQPPGFIDHASPQLVCKLRKAIYGLKQAPRAWYSEL 753


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  164 bits (414), Expect(2) = 1e-53
 Identities = 79/118 (66%), Positives = 89/118 (75%)
 Frame = -1

Query: 491  EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAIT 312
            EPT    A KD  W+ AM  EY AL+KN TW LVPP    N++ CKWVYK+KR   G + 
Sbjct: 666  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLD 725

Query: 311  RYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            RYKARLVAKGF Q+ GIDY +TFSPVVK  TIR++LSLAVS GWSLRQLDVQNAFLHG
Sbjct: 726  RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHG 783



 Score = 75.5 bits (184), Expect(2) = 1e-53
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLSK 1
           L+E VY+ QPPGF D  KPHH+C L K+LYGLKQAPRAWF RLSK
Sbjct: 785 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSK 829


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  164 bits (414), Expect(2) = 1e-53
 Identities = 79/118 (66%), Positives = 89/118 (75%)
 Frame = -1

Query: 491  EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAIT 312
            EPT    A KD  W+ AM  EY AL+KN TW LVPP    N++ CKWVYK+KR   G + 
Sbjct: 937  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLD 996

Query: 311  RYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            RYKARLVAKGF Q+ GIDY +TFSPVVK  TIR++LSLAVS GWSLRQLDVQNAFLHG
Sbjct: 997  RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHG 1054



 Score = 75.5 bits (184), Expect(2) = 1e-53
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLSK 1
            L+E VY+ QPPGF D  KPHH+C L K+LYGLKQAPRAWF RLSK
Sbjct: 1056 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSK 1100


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  164 bits (414), Expect(2) = 1e-53
 Identities = 79/118 (66%), Positives = 89/118 (75%)
 Frame = -1

Query: 491  EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAIT 312
            EPT    A KD  W+ AM  EY AL+KN TW LVPP    N++ CKWVYK+KR   G + 
Sbjct: 944  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLD 1003

Query: 311  RYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            RYKARLVAKGF Q+ GIDY +TFSPVVK  TIR++LSLAVS GWSLRQLDVQNAFLHG
Sbjct: 1004 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHG 1061



 Score = 75.5 bits (184), Expect(2) = 1e-53
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLSK 1
            L+E VY+ QPPGF D  KPHH+C L K+LYGLKQAPRAWF RLSK
Sbjct: 1063 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSK 1107


>ref|XP_020158271.1| uncharacterized protein LOC109743586 [Aegilops tauschii subsp.
           tauschii]
          Length = 380

 Score =  169 bits (427), Expect(2) = 1e-53
 Identities = 76/107 (71%), Positives = 92/107 (85%)
 Frame = -1

Query: 458 PQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGF 279
           P W+ AM +EY+ALMKN TWT+VPP S +N++D KWV+K+K+   G+I RYKARLVAKGF
Sbjct: 4   PHWRAAMEQEYQALMKNKTWTIVPPPSRINIIDSKWVFKVKKHADGSIERYKARLVAKGF 63

Query: 278 NQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            Q+ G+DY +TFSPVVKPTTIR++LSLAVS GWSLRQLDVQNAFLHG
Sbjct: 64  KQRQGLDYEDTFSPVVKPTTIRLLLSLAVSRGWSLRQLDVQNAFLHG 110



 Score = 70.5 bits (171), Expect(2) = 1e-53
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
           L+E VY+RQP GFVD  +PHHLC L K++YGLKQAPRAW  RL+
Sbjct: 112 LEEEVYMRQPSGFVDHTRPHHLCHLTKAIYGLKQAPRAWHARLA 155


>gb|PRQ50596.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 306

 Score =  164 bits (415), Expect(2) = 2e-53
 Identities = 76/118 (64%), Positives = 96/118 (81%)
 Frame = -1

Query: 491 EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAIT 312
           EPT ++ A+KD  W+ AM+EE  AL+KN TW+LV P  + +VV CKWV+++KR+  G++ 
Sbjct: 2   EPTCYTQASKDANWRAAMTEEINALLKNHTWSLVHPSPSQHVVGCKWVFRIKRNPDGSVE 61

Query: 311 RYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
           RYKARLVAKGF+QQ GIDY ET+SPV+KP TIR VL +AVS GWSLRQLDV+NAFLHG
Sbjct: 62  RYKARLVAKGFHQQHGIDYGETYSPVIKPATIRTVLCVAVSRGWSLRQLDVKNAFLHG 119



 Score = 74.7 bits (182), Expect(2) = 2e-53
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
           L+E VY+ QPPGFVD ++P ++C LHK+LYGLKQAPRAWFQR+S
Sbjct: 121 LQEDVYMTQPPGFVDSSRPSYVCKLHKALYGLKQAPRAWFQRMS 164


>ref|XP_008369089.1| PREDICTED: uncharacterized protein LOC103432662 [Malus domestica]
          Length = 1318

 Score =  172 bits (435), Expect(2) = 3e-53
 Identities = 82/147 (55%), Positives = 111/147 (75%), Gaps = 2/147 (1%)
 Frame = -1

Query: 572  AHLRQNPPKTKRY-DPSAFHATTE-PIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGTW 399
            +H  Q   K++ + + +AF A  +   + EP+++SVA+K P+WQ AM EE  AL +  TW
Sbjct: 842  SHPMQTRSKSRIFKNKTAFPAQVQCDSIKEPSSYSVASKSPEWQQAMHEEMAALTQQQTW 901

Query: 398  TLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTT 219
            TLVP   N N+V CKW+YK+KR   G++ RYKARLVAKGF+Q AG+DY+ETFSPVVKPTT
Sbjct: 902  TLVPLPQNKNLVGCKWIYKVKRHPDGSVARYKARLVAKGFSQAAGLDYYETFSPVVKPTT 961

Query: 218  IRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            +R++ SLA ++GW L+QLDV+NAFLHG
Sbjct: 962  VRLLFSLAATYGWQLKQLDVKNAFLHG 988



 Score = 66.2 bits (160), Expect(2) = 3e-53
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLSK 1
            L+E VY+ QP GFVD+  P ++C LHKSLYGLKQAPRAW  R +K
Sbjct: 990  LEEEVYMCQPQGFVDQVHPEYVCKLHKSLYGLKQAPRAWNDRFTK 1034


>gb|OMO89784.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1048

 Score =  170 bits (431), Expect(2) = 5e-53
 Identities = 106/269 (39%), Positives = 140/269 (52%), Gaps = 12/269 (4%)
 Frame = -1

Query: 905  RLYIARHVRFHEQYFPFLHQPSATPTQSQ-PDPYFSSFPISCCSPTQSATEPVSAPPSAQ 729
            R+YI+R+V F E  FPF  Q  A+ T +  P      FP    S +  A    +  PS+ 
Sbjct: 664  RIYISRNVAFDENLFPFAGQKKASVTTTHTPIILLWLFPSETSSSSIQALSTPTIDPSSD 723

Query: 728  T-------HXXXXXXXXXXXXXXXXXXXXXXXXPTESLQPLPNHXXXXXXXXXXXXTRPA 570
                                              T S  P  +                 
Sbjct: 724  VLGSTTLKEPQHSDPTFAAELPSNEQVIEQETSMTSSSTPPDSDPPPSTSLHPMMTRLKV 783

Query: 569  HLRQNPPK----TKRYDPSAFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGT 402
             +R+  PK    TK   P+ + +T E   +EPT FS A+KDP+W+ AM +E+ AL++N T
Sbjct: 784  GIRK--PKALCTTKHPLPACYSSTLEHSSSEPTCFSQASKDPRWRQAMQDEFNALLRNNT 841

Query: 401  WTLVPPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPT 222
            W LVPP +  N+V  KWVY++K    G+I RYKARLVAKGF+QQ G+DY ETFSPVVK  
Sbjct: 842  WVLVPPSTPQNIVGSKWVYRIKYKSDGSIERYKARLVAKGFHQQLGLDYDETFSPVVKAP 901

Query: 221  TIRVVLSLAVSHGWSLRQLDVQNAFLHGD 135
            TIR+VLSLA S+   L+QLDV+NAFLHG+
Sbjct: 902  TIRLVLSLACSYNLDLQQLDVKNAFLHGN 930



 Score = 67.0 bits (162), Expect(2) = 5e-53
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
            L E VY++QP GFVD  +P H+C L K++YGLKQAPRAWF+R S
Sbjct: 931  LNEDVYMQQPQGFVDPTRPGHVCRLQKAIYGLKQAPRAWFKRFS 974


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
 gb|AAA57005.1| copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  168 bits (426), Expect(2) = 9e-53
 Identities = 85/144 (59%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
 Frame = -1

Query: 566  LRQNPPKTKRY-DPSAFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLV 390
            L+    K K++ D +  +      +TEP++ S A  DPQW+ AM  E++AL KN TWTLV
Sbjct: 898  LQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWTLV 957

Query: 389  PPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRV 210
            PP    N++DCKWV+K+K +  G+I R KARLVAKGF QQ GIDY +TFSPVVK +TIR+
Sbjct: 958  PPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTIRL 1017

Query: 209  VLSLAVSHGWSLRQLDVQNAFLHG 138
            VLSLAVS  WSLRQLDVQNAFLHG
Sbjct: 1018 VLSLAVSQKWSLRQLDVQNAFLHG 1041



 Score = 68.2 bits (165), Expect(2) = 9e-53
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLSK 1
            L+ETVY++QPPGF D   P++ C L KSLYGLKQ PRAW+ RLS+
Sbjct: 1043 LEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSE 1087


>gb|PRQ35692.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1207

 Score =  162 bits (409), Expect(2) = 9e-53
 Identities = 74/118 (62%), Positives = 95/118 (80%)
 Frame = -1

Query: 491  EPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVSNVNVVDCKWVYKLKRDKHGAIT 312
            EPT ++ A+KD  W+ AM+EE  AL+KN TW+LV P  + ++V CKWV+++KR+  G++ 
Sbjct: 692  EPTCYTQASKDVNWRAAMAEEINALLKNHTWSLVAPSPSQHIVGCKWVFRIKRNPDGSVE 751

Query: 311  RYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSLAVSHGWSLRQLDVQNAFLHG 138
            RYKARLVAKGF+QQ GIDY ET+SPV+KP TIR VL +AVS GW LRQLDV+NAFLHG
Sbjct: 752  RYKARLVAKGFHQQHGIDYGETYSPVIKPATIRTVLCVAVSRGWPLRQLDVKNAFLHG 809



 Score = 74.7 bits (182), Expect(2) = 9e-53
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
           L+E VY+ QPPGFVD ++P ++C LHK+LYGLKQAPRAWFQR+S
Sbjct: 811 LQEDVYMTQPPGFVDSSRPSYVCKLHKALYGLKQAPRAWFQRMS 854


>gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punica granatum]
          Length = 584

 Score =  173 bits (438), Expect(2) = 1e-52
 Identities = 84/140 (60%), Positives = 103/140 (73%), Gaps = 3/140 (2%)
 Frame = -1

Query: 548 KTKRYDPSAFHATTE---PIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLVPPVS 378
           K   + P   H TT+   P   EPT  S A +D +W+ AMSEE+ AL+KN TW LVP   
Sbjct: 91  KNNIFKPKQLHLTTKHPLPESLEPTCVSQALRDSKWRLAMSEEFNALVKNHTWDLVPASK 150

Query: 377 NVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRVVLSL 198
             N++ CKWV+++KR+  G+I RYKARLVAKGF+Q+ G+DY ETFSPV+KPTTIRVVLSL
Sbjct: 151 RQNIIGCKWVFRIKRNADGSINRYKARLVAKGFHQRPGLDYTETFSPVIKPTTIRVVLSL 210

Query: 197 AVSHGWSLRQLDVQNAFLHG 138
           AVS GW +RQLDV NAFLHG
Sbjct: 211 AVSSGWPIRQLDVSNAFLHG 230



 Score = 63.2 bits (152), Expect(2) = 1e-52
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = -3

Query: 135 LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRL 7
           + E VY+ QPPGFVD   P H+C L K+LYGLKQAPRAW++ L
Sbjct: 232 IDEEVYMVQPPGFVDSNHPTHVCRLRKALYGLKQAPRAWYRAL 274


>ref|XP_020197777.1| uncharacterized protein LOC109783596 [Aegilops tauschii subsp.
            tauschii]
          Length = 1355

 Score =  172 bits (435), Expect(2) = 2e-52
 Identities = 81/144 (56%), Positives = 102/144 (70%)
 Frame = -1

Query: 569  HLRQNPPKTKRYDPSAFHATTEPIVTEPTTFSVANKDPQWQHAMSEEYRALMKNGTWTLV 390
            H R     T  +  +   A      +EP T+  A   P W+ AM +EY AL++N TWTLV
Sbjct: 816  HTRSRTDGTVGWLAACLAAARADPTSEPCTYQAALSIPHWREAMEQEYHALLRNKTWTLV 875

Query: 389  PPVSNVNVVDCKWVYKLKRDKHGAITRYKARLVAKGFNQQAGIDYHETFSPVVKPTTIRV 210
            PP   VNV+D KWV+K+K+   G+I RYKARLVA+GF Q+ G+DY +TFSPVVKPTTIR+
Sbjct: 876  PPPPRVNVIDSKWVFKVKKHSDGSIERYKARLVARGFRQRYGLDYEDTFSPVVKPTTIRL 935

Query: 209  VLSLAVSHGWSLRQLDVQNAFLHG 138
            +LSLA++ GWSLRQLDVQNAFLHG
Sbjct: 936  LLSLAITRGWSLRQLDVQNAFLHG 959



 Score = 63.9 bits (154), Expect(2) = 2e-52
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -3

Query: 135  LKETVYLRQPPGFVDRAKPHHLCLLHKSLYGLKQAPRAWFQRLS 4
            L+E VY+RQPPGF D  +P +LC L K+ YGLKQAPRAW  RL+
Sbjct: 961  LEEEVYMRQPPGFFDPDRPDYLCRLTKAFYGLKQAPRAWHARLA 1004