BLASTX nr result

ID: Chrysanthemum21_contig00042033 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00042033
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023766953.1| protein TRANSPARENT TESTA 1-like [Lactuca sa...   105   2e-24
ref|XP_021982979.1| zinc finger protein WIP6-like [Helianthus an...    72   6e-12
gb|KVI00677.1| hypothetical protein Ccrd_021074 [Cynara carduncu...    64   4e-09

>ref|XP_023766953.1| protein TRANSPARENT TESTA 1-like [Lactuca sativa]
 gb|PLY83094.1| hypothetical protein LSAT_1X107620 [Lactuca sativa]
          Length = 356

 Score =  105 bits (263), Expect = 2e-24
 Identities = 65/147 (44%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
 Frame = -2

Query: 425 MTNPNFFKGGLPFISHHPYQCYYYSSNDRPSLPYPYHNMXXXXXXXXXXXXXXXXXXSH- 249
           MTNP F KG  PFISHHPY   Y+SS+++ S  +PY NM                  S  
Sbjct: 1   MTNPTFLKGCFPFISHHPYYYLYHSSDNQSSASHPYLNMSSSLSSSPPPLKEALPLLSKL 60

Query: 248 --KRDLELQQHDHPLSNPTMEDENICRF---XXXXXXXXXXXXXTLNIGLPTTPSYPSYS 84
             KRDLEL +H +P  N  +ED+N C F                TLNIGLPT     SYS
Sbjct: 61  NLKRDLEL-EHRYPTYNTAIEDKNGCSFSTSTTTNTGSTTTVNVTLNIGLPT-----SYS 114

Query: 83  EDKGIHSDEFLPGFSCCPKEKGIIGNE 3
           ++KGI+ DE L GF CCPK+KG+ G E
Sbjct: 115 QEKGINGDEVLLGFPCCPKQKGVNGEE 141


>ref|XP_021982979.1| zinc finger protein WIP6-like [Helianthus annuus]
 gb|OTG15551.1| putative zinc finger C2H2-type/integrase DNA-binding
           domain-containing protein [Helianthus annuus]
          Length = 345

 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 54/142 (38%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
 Frame = -2

Query: 425 MTNPNFFKGGLPFISHHPYQCYYYSSNDRPSLPYPYHNMXXXXXXXXXXXXXXXXXXSHK 246
           MTNP F KG LPF+SHHP    YYSSN++ S  Y +  M                     
Sbjct: 1   MTNPTF-KGCLPFLSHHPIYYCYYSSNNQSSPSYSHQTMTSSSSPQLKEALPLLSKLIDT 59

Query: 245 RDLELQQHDHPLSNPTMED--ENICRFXXXXXXXXXXXXXTLNIGLPTTPSYPSYSEDKG 72
            +  LQ H    S  T+ED  +N C F             TLNIGLPTT    + +E KG
Sbjct: 60  PNKGLQHHQP--SCKTIEDVYKNSCTF----SATNSEVNVTLNIGLPTT---STTTEHKG 110

Query: 71  IHSDEFLPGFSCCPKEKGIIGN 6
            +SDE L GF C PK+  + G+
Sbjct: 111 TNSDEMLLGFPCFPKKNDVNGD 132


>gb|KVI00677.1| hypothetical protein Ccrd_021074 [Cynara cardunculus var. scolymus]
          Length = 310

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
 Frame = -2

Query: 248 KRDLELQQHDHPLSNPTME-DENICRFXXXXXXXXXXXXXT---LNIGLPTTPSYPSYSE 81
           K+DLELQ HD P SN  ME D+N CRF                 LNIGLPT+P YPSY +
Sbjct: 28  KKDLELQHHD-PSSNSAMEEDKNNCRFSTSTTTKLLTSTTVNVTLNIGLPTSPIYPSYPQ 86

Query: 80  DK-GIHSDEFLPGFSCCPKEKGIIGNE 3
           +K   + DE L  F  CP++KG  G+E
Sbjct: 87  EKVTSNGDEMLLEFPFCPEKKGGNGDE 113


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