BLASTX nr result

ID: Chrysanthemum21_contig00041903 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00041903
         (814 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAX04582.1| hCG1999844, partial [Homo sapiens]                      60   9e-07

>gb|EAX04582.1| hCG1999844, partial [Homo sapiens]
          Length = 400

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 38/135 (28%), Positives = 50/135 (37%)
 Frame = +1

Query: 169 HLHHYSDNQKTCQTHHYQSLNQYGHTHQYFLHCHFHCLMIKDYHSL**IYHCPYEHSFFS 348
           H HH+  +   C  HHY   + + H H Y  HCH HC            YH  Y H  + 
Sbjct: 133 HYHHHHHHHLHCH-HHYYHHHHHHHHHHYHHHCH-HC------------YHHHYHHHHY- 177

Query: 349 LF*HCHLVSLEPYPYLISFV*QGLLHRY*HP*QHHAYPLHP*QHHSYPLHCQHPYKKVHY 528
              HCH                   H Y H   +H Y  H   HH +P H  H Y   H+
Sbjct: 178 ---HCH-------------------HHYHHHHHYHPYHYHQHHHHYHPHHYHHHYYHCHH 215

Query: 529 DLPWLQSYPHPPNHN 573
              +   +PH  +H+
Sbjct: 216 HHDY--HHPHHCHHH 228


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