BLASTX nr result

ID: Chrysanthemum21_contig00041637 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00041637
         (725 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY92280.1| hypothetical protein LSAT_2X130361 [Lactuca sativa]     58   1e-07

>gb|PLY92280.1| hypothetical protein LSAT_2X130361 [Lactuca sativa]
          Length = 179

 Score = 57.8 bits (138), Expect(2) = 1e-07
 Identities = 24/56 (42%), Positives = 37/56 (66%)
 Frame = -1

Query: 278 SMIWSNILPQKVNTFMWRMTLDRLSYCLNLSTRGMEIQQICCPS*KGIVESNQHIF 111
           S  W+  +P K+N FMWR+ L+R++  +NLS RG++I  + CPS    VE + H+F
Sbjct: 13  STCWNKYVPIKINVFMWRVLLNRITTRINLSNRGIDIPCLFCPSCDNAVEDSNHVF 68



 Score = 26.6 bits (57), Expect(2) = 1e-07
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -2

Query: 121 NTFFECETAQNIWRLVLMWCDLNMASFKSNNALKDWLSS 5
           + F  C+ A  +W  +  W DL +    +   L  W+ +
Sbjct: 66  HVFLLCDIAVQVWNAITRWVDLTLRPLINIVELMSWVDT 104


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