BLASTX nr result

ID: Chrysanthemum21_contig00041461 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00041461
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY92842.1| hypothetical protein LSAT_5X181601 [Lactuca sativa]     70   3e-12

>gb|PLY92842.1| hypothetical protein LSAT_5X181601 [Lactuca sativa]
          Length = 116

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 39/87 (44%), Positives = 47/87 (54%)
 Frame = -1

Query: 464 MRQGTKSLAIVASLVLLFMSFECNVASRPFGGELEKVWMKTENLLLSSLPRGSVXXXXXX 285
           MR  T+  A++ASLVL  M+FE N A R   G  E+ WMK  NL LSSL +GSV      
Sbjct: 1   MRATTQKFAVIASLVLFCMAFEPNEACRLLDGGFEETWMKAGNLFLSSLQKGSVPTPGNG 60

Query: 284 XXXXXXXXNHCIGSRKLVGRVGGVAAP 204
                     CIGS+K+ G  GG  AP
Sbjct: 61  CSSTGNGGGSCIGSKKVAGGHGGDGAP 87


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