BLASTX nr result

ID: Chrysanthemum21_contig00040978 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00040978
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG36432.1| hypothetical protein HannXRQ_Chr01g0007551 [Helia...    69   6e-11
ref|XP_021970880.1| protein PLASTID MOVEMENT IMPAIRED 1-RELATED ...    69   6e-11
ref|XP_021980876.1| protein PLASTID MOVEMENT IMPAIRED 1-RELATED ...    56   2e-06

>gb|OTG36432.1| hypothetical protein HannXRQ_Chr01g0007551 [Helianthus annuus]
          Length = 1040

 Score = 68.6 bits (166), Expect = 6e-11
 Identities = 43/107 (40%), Positives = 52/107 (48%)
 Frame = +2

Query: 44  LESLPVKESELQQEECVITESNTKGQDFDDKXXXXXXXXXXXNNVADFEKXXXXXXXXXX 223
           LESL V+ S+ Q EECV++ESNTK ++FDDK           NNV D ++          
Sbjct: 354 LESLLVERSKSQTEECVVSESNTKEKEFDDKELLLQELELALNNVTDLKE---------- 403

Query: 224 NVVXXXXXXXXXXXXXXXXXXXXXLKIGYKEKGKSLKLDYATETLAD 364
                                    K GYKEKGKSLKLDY TET+AD
Sbjct: 404 ------ESDSQEESECLNETECSEAKTGYKEKGKSLKLDYDTETVAD 444


>ref|XP_021970880.1| protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like [Helianthus
           annuus]
          Length = 1049

 Score = 68.6 bits (166), Expect = 6e-11
 Identities = 43/107 (40%), Positives = 52/107 (48%)
 Frame = +2

Query: 44  LESLPVKESELQQEECVITESNTKGQDFDDKXXXXXXXXXXXNNVADFEKXXXXXXXXXX 223
           LESL V+ S+ Q EECV++ESNTK ++FDDK           NNV D ++          
Sbjct: 363 LESLLVERSKSQTEECVVSESNTKEKEFDDKELLLQELELALNNVTDLKE---------- 412

Query: 224 NVVXXXXXXXXXXXXXXXXXXXXXLKIGYKEKGKSLKLDYATETLAD 364
                                    K GYKEKGKSLKLDY TET+AD
Sbjct: 413 ------ESDSQEESECLNETECSEAKTGYKEKGKSLKLDYDTETVAD 453


>ref|XP_021980876.1| protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like [Helianthus
           annuus]
 ref|XP_021980877.1| protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like [Helianthus
           annuus]
 ref|XP_021980878.1| protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like [Helianthus
           annuus]
 gb|OTG13421.1| hypothetical protein HannXRQ_Chr09g0237961 [Helianthus annuus]
          Length = 1035

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 42/121 (34%), Positives = 50/121 (41%)
 Frame = +2

Query: 2   FDGSEKPADEGDLQLESLPVKESELQQEECVITESNTKGQDFDDKXXXXXXXXXXXNNVA 181
           FDGSE    E DL ++SLPVKE E Q EE            F DK           NN  
Sbjct: 352 FDGSESSTFERDLDVDSLPVKEFESQNEE------------FGDKELLLQELELALNNAV 399

Query: 182 DFEKXXXXXXXXXXNVVXXXXXXXXXXXXXXXXXXXXXLKIGYKEKGKSLKLDYATETLA 361
           D  K          N+                      +K+GY EKGKSL+LDYATE +A
Sbjct: 400 DL-KEESDSQEENENI------------NKSGFRYEEKVKVGYNEKGKSLELDYATEAVA 446

Query: 362 D 364
           +
Sbjct: 447 E 447


Top