BLASTX nr result
ID: Chrysanthemum21_contig00040557
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00040557
(1382 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] 529 e-172
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera] 415 e-131
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera] 405 e-130
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 407 e-125
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 398 e-124
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 387 e-119
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera] 367 e-112
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 334 e-112
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group] 332 e-111
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc... 332 e-111
gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subc... 330 e-110
gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japo... 330 e-110
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 330 e-110
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 329 e-110
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group] 329 e-110
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 329 e-110
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc... 329 e-110
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ... 329 e-110
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc... 329 e-110
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-... 329 e-110
>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 529 bits (1363), Expect = e-172
Identities = 256/357 (71%), Positives = 294/357 (82%), Gaps = 2/357 (0%)
Frame = +1
Query: 316 DSSGSVGK-IQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNIEKMKNNGLIKFQ 492
DS GSV I N +L S+D CSISLWHKRLAHTN+KNIEKM+ GL+K
Sbjct: 460 DSGGSVSSSIGECNAIGFDLNEIMSSDYIACSISLWHKRLAHTNIKNIEKMQTKGLLKLN 519
Query: 493 NKDFEKCETCVKSKFVKKPFPTV-KRETTLLELIHSDICELNGILTRGGKRYFITFCDDS 669
+KDFEKCETCVKSKF KKPFP+V KR T+LLELIHSDICELNG+LTRGGKRYFI+FCDDS
Sbjct: 520 DKDFEKCETCVKSKFTKKPFPSVPKRNTSLLELIHSDICELNGVLTRGGKRYFISFCDDS 579
Query: 670 SRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFTGEFDAFCEENGIK 849
SRYLYVYLL SKDEAF++FK+YKAEVE Q KRIKILRSDRGGEYF FDAFCEE GI
Sbjct: 580 SRYLYVYLLHSKDEAFEAFKIYKAEVEKQKEKRIKILRSDRGGEYFNRRFDAFCEEEGII 639
Query: 850 HERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAACHIHNRITSRVIR 1029
HERT+PYTPQQNGLAERKNRTLVEM NCMLNQSGLP N+WGEA+L AC++HNRITSRVI
Sbjct: 640 HERTAPYTPQQNGLAERKNRTLVEMANCMLNQSGLPRNMWGEAVLTACYVHNRITSRVIP 699
Query: 1030 MSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVGYARNSKAYRLLDD 1209
SPYE WKGRKPNL+++RVWGCLAYYR PDPK KLG R +S+F+GYA +SK+YRLLDD
Sbjct: 700 TSPYELWKGRKPNLEHLRVWGCLAYYRVPDPKTLKLGERAFKSVFIGYASHSKSYRLLDD 759
Query: 1210 KTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKINEPRRSTRARKE 1380
++G+++ESRDVEFFE+KFS+D ENS+ +S R + S + EPR+STR RKE
Sbjct: 760 ESGIVVESRDVEFFENKFSRDDENSNG-TTTSSTSEKRVQPSPIVEEPRKSTRVRKE 815
Score = 79.7 bits (195), Expect = 6e-12
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +2
Query: 2 TVHVCDSRDKFVDYHKVT-GKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSI 178
TVHVC +R F+ Y V G V+ A+ R +V G GTV+L F G+VVTLQ+V HVP I
Sbjct: 325 TVHVCGNRGSFLTYAPVPQGTVVVCADGHRVEVRGKGTVRLNFRDGQVVTLQDVLHVPGI 384
Query: 179 PKCLISVSKLDEHGFKITFESRKVVISKHGVFV 277
K L+S K D +G+K+ ++ +V S + ++V
Sbjct: 385 TKGLVSADKFDRNGYKLVIKNLRVKFSLNDIYV 417
>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 415 bits (1066), Expect = e-131
Identities = 216/375 (57%), Positives = 265/375 (70%), Gaps = 7/375 (1%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVC---SISLWHKRLAHTNV 447
GKGY GM ++ + N+N ST +C S+ LWH RLAH +
Sbjct: 297 GKGYSCDGMIKLSTND-------NIN-------KMTSTSAYMCDSNSLILWHNRLAHVGL 342
Query: 448 KNIEKMKNNGLIKFQNKDFEKCETCVKSKFVKKPFPTVKRETTLLELIHSDICELNGILT 627
I+++ GLI K FEKCE CVKSK +KKPF +V+R + LL+LIHSD+CELNG+LT
Sbjct: 343 STIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCELNGMLT 402
Query: 628 RGGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYF 807
RGG RYF+TF DD SR+ YV+LL++K E F++FKVYKAEVENQLGK IK+LRSDRGGEYF
Sbjct: 403 RGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYF 462
Query: 808 TGEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLA 987
+ EF++FCEE GI HE T+PYTPQ NG+AERKNRT +EMVN ML + L NLWGEALL
Sbjct: 463 SSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALLI 522
Query: 988 ACHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFV 1167
AC+I NRI + +SPYE WKGRKPN+ Y +VWGCL Y + DP ++KLG R I+ FV
Sbjct: 523 ACYILNRIPMKKNEISPYELWKGRKPNIGYFKVWGCLTYCKKTDPNKTKLGPRAIKCAFV 582
Query: 1168 GYARNSKAYRLLDDKTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKIN 1347
GYA NSKAYRLLD ++ VIIESR+VEFFE+ S NS VPTS G S+ ET +K+
Sbjct: 583 GYASNSKAYRLLDLESNVIIESREVEFFENLLSD--SNSQ---VPTSVGESQEETLSKVV 637
Query: 1348 E----PRRSTRARKE 1380
E PR+S RARKE
Sbjct: 638 EQPIVPRKSQRARKE 652
Score = 61.6 bits (148), Expect = 3e-06
Identities = 39/102 (38%), Positives = 58/102 (56%)
Frame = +2
Query: 2 TVHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIP 181
TVHV + F T +Q + + + +V G GT+++ FTSGK VTL+NV +VP +
Sbjct: 210 TVHVTYDKSLFK-----TLRQGMKSAKGDQEVLGKGTIEVVFTSGKKVTLKNVLYVPDMN 264
Query: 182 KCLISVSKLDEHGFKITFESRKVVISKHGVFVEKDTM*EGCI 307
K L+S L + G K FES K++++K FV K +G I
Sbjct: 265 KNLVSRDLLGKPGIKAVFESGKLILTKSRNFVGKGYSCDGMI 306
>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
Length = 791
Score = 405 bits (1041), Expect = e-130
Identities = 211/370 (57%), Positives = 262/370 (70%), Gaps = 4/370 (1%)
Frame = +1
Query: 283 GYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNIEK 462
G +VG Y D G + N N+ + D++ S+ LWH RLAH + I++
Sbjct: 381 GNFVGNGYSCD---GMIKLCTNDNIIKMASTSAYMCDSN--SLILWHNRLAHVGLSIIKR 435
Query: 463 MKNNGLIKFQNKDFEKCETCVKSKFVKKPFPTVKRETTLLELIHSDICELNGILTRGGKR 642
+ GLI K FEKCE CVKSK +KKPF +V+R + LL+LIHSD+CELNG+LTRGG R
Sbjct: 436 IVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCELNGMLTRGGNR 495
Query: 643 YFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFTGEFD 822
YF+TF DD SR+ YV+LL++K E F++FKVY A+VENQLGK IK+LRSDRGGEYF+ EF+
Sbjct: 496 YFLTFIDDCSRFTYVFLLKNKSETFNAFKVYNAKVENQLGKNIKVLRSDRGGEYFSSEFN 555
Query: 823 AFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAACHIH 1002
+FCEE GI HE T+PYTPQ NG+AERKNRT +EMVN ML + L NLWGEALL ACHI
Sbjct: 556 SFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALLIACHIL 615
Query: 1003 NRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVGYARN 1182
NRI + +SPYE WKGRKPN+ Y +VW CLAY + DP ++KLG R I+ FVGYA N
Sbjct: 616 NRIPMKKNEISPYELWKGRKPNIGYFKVWRCLAYCKKTDPYKTKLGPRAIKCAFVGYASN 675
Query: 1183 SKAYRLLDDKTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKINE---- 1350
SKAYR+LD ++ VIIESR+VEFF++ S NS VPTS G S ET +K+ E
Sbjct: 676 SKAYRILDLESNVIIESREVEFFKNLLSD--SNSQ---VPTSVGESLEETPSKVVEQPIM 730
Query: 1351 PRRSTRARKE 1380
PR+S RARKE
Sbjct: 731 PRKSQRARKE 740
Score = 66.2 bits (160), Expect = 9e-08
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +2
Query: 59 KQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPKCLISVSKLDEHGFKITFE 238
++V M N R+ V G GT+++ FTSGK VTL NV +VP + K L+S L + FK FE
Sbjct: 312 QEVQMGNEGRSKVLGKGTIEVAFTSGKRVTLINVLYVPDMNKNLVSGDLLGKPSFKAVFE 371
Query: 239 SRKVVISKHGVFVEKDTM*EGCI 307
S K+++SK G FV +G I
Sbjct: 372 SGKLILSKSGNFVGNGYSCDGMI 394
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 407 bits (1045), Expect = e-125
Identities = 213/375 (56%), Positives = 261/375 (69%), Gaps = 7/375 (1%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVC---SISLWHKRLAHTNV 447
GKGY GM ++ + N+N ST +C S+ LWH RLAH +
Sbjct: 407 GKGYSCDGMIKLSTND-------NIN-------KMTSTSAYMCDSNSLXLWHNRLAHVGL 452
Query: 448 KNIEKMKNNGLIKFQNKDFEKCETCVKSKFVKKPFPTVKRETTLLELIHSDICELNGILT 627
I+++ GLI K FEKCE CVKSK +KKPF +V+R + LL+L HSD+CELNG+LT
Sbjct: 453 STIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCELNGMLT 512
Query: 628 RGGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYF 807
RGG RYF+TF DD SR+ YV+LL++K E F++FKVYKAEVENQL K IK+LRSDRG EYF
Sbjct: 513 RGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLXKNIKVLRSDRGXEYF 572
Query: 808 TGEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLA 987
+ EF++FCEE GI HE T+PYTPQ NG+AERKNRT +EMVN ML + L NLWGEALL
Sbjct: 573 SSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNXMLLHAKLNFNLWGEALLT 632
Query: 988 ACHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFV 1167
ACHI NRI + +SPYE WKGRKPN+ Y +VWGCLAY + DP ++KLG R I+ FV
Sbjct: 633 ACHILNRIPMKKKEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFV 692
Query: 1168 GYARNSKAYRLLDDKTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKIN 1347
G A NS AYRLLD ++ VIIESR+VEFFE+ S NS VPTS G S+ ET +K+
Sbjct: 693 GCASNSNAYRLLDLESNVIIESREVEFFENLLSD--SNSQ---VPTSVGESQEETPSKVV 747
Query: 1348 E----PRRSTRARKE 1380
E PR+S RARKE
Sbjct: 748 EQPIVPRKSQRARKE 762
Score = 73.6 bits (179), Expect = 5e-10
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 TVHVCDSRDKFVDYHKVTGKQVI-MANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSI 178
TVHV + F + G Q + M N ++ V G GT+++ FTSGK VTL+NV +VP +
Sbjct: 314 TVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVLYVPDM 373
Query: 179 PKCLISVSKLDEHGFKITFESRKVVISKHGVFVEKDTM*EGCI 307
K L+S L + G K FES K++++K G FV K +G I
Sbjct: 374 NKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGYSCDGMI 416
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 398 bits (1022), Expect = e-124
Identities = 208/375 (55%), Positives = 258/375 (68%), Gaps = 7/375 (1%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVC---SISLWHKRLAHTNV 447
GKGY GM ++ N +++++ ST +C S+ LWH RLAH +
Sbjct: 200 GKGYSCDGMIKLCT-----------NDNIIKMA---STSAYMCDSNSLFLWHNRLAHVGL 245
Query: 448 KNIEKMKNNGLIKFQNKDFEKCETCVKSKFVKKPFPTVKRETTLLELIHSDICELNGILT 627
I+++ GLI K FEKCE CVKSK +KK F +V+R + LL+L HSD+CELN +LT
Sbjct: 246 STIKRIVKCGLIACDTKKFEKCEICVKSKMIKKXFHSVERSSNLLDLXHSDLCELNXMLT 305
Query: 628 RGGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYF 807
RGG YF+TF D+ SR+ YV+LL++K E F++FKVYK EVENQLGK IK+LRSDRGGEYF
Sbjct: 306 RGGNXYFJTFIDBXSRFTYVFLLKNKSETFNAFKVYKTEVENQLGKNIKVLRSDRGGEYF 365
Query: 808 TGEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLA 987
+ EF++FCEE GI HE T+PYTPQ NG+AERKNRT +EMVN ML + L NLWGEAL
Sbjct: 366 SSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALFT 425
Query: 988 ACHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFV 1167
ACHI NRI + +SPYE WKGRKPN+ Y +VWGCLAY + DP ++KL R I+ FV
Sbjct: 426 ACHILNRIPMKKNEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLXPRAIKCAFV 485
Query: 1168 GYARNSKAYRLLDDKTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKIN 1347
GYA NSKAYRLLD + IIESR+VEFFE+ S NS VPTS G S ET +K+
Sbjct: 486 GYASNSKAYRLLDLEXNXIIESREVEFFENLLSD--SNSQ---VPTSVGESLEETPSKVI 540
Query: 1348 E----PRRSTRARKE 1380
E PR+S RARKE
Sbjct: 541 EQPIVPRKSQRARKE 555
Score = 69.3 bits (168), Expect = 1e-08
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 TVHVCDSRDKFVDYHKVTGKQVI-MANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSI 178
TV+V + F + G Q + M N + V G GT+++ FTSGK VTL NV +VP +
Sbjct: 107 TVYVTYDKSLFKTFEDAKGDQEVQMGNEGGSKVLGKGTIEVAFTSGKRVTLINVLYVPDM 166
Query: 179 PKCLISVSKLDEHGFKITFESRKVVISKHGVFVEKDTM*EGCI 307
K L+S L + G K FES K+++SK G FV K +G I
Sbjct: 167 NKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMI 209
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 387 bits (993), Expect = e-119
Identities = 205/375 (54%), Positives = 255/375 (68%), Gaps = 7/375 (1%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVC---SISLWHKRLAHTNV 447
GKGY GM ++ N +++++ ST +C S+ LWH RLAH +
Sbjct: 359 GKGYSCDGMIKLCT-----------NDNIIKMA---STSAYMCDSNSLFLWHNRLAHVGL 404
Query: 448 KNIEKMKNNGLIKFQNKDFEKCETCVKSKFVKKPFPTVKRETTLLELIHSDICELNGILT 627
I+++ GLI K FEKCE CVKSK +K PF +V+R + LL+LIHSD+CELNG+LT
Sbjct: 405 STIKRIVKCGLIACDTKKFEKCEICVKSKMIKMPFHSVERSSNLLDLIHSDLCELNGMLT 464
Query: 628 RGGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYF 807
+GG RYF+TF DD SR+ YV+LL++K E F++FKVYKAEVENQLGK IK+LRSDRGGEYF
Sbjct: 465 KGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYF 524
Query: 808 TGEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLA 987
+ EF++FCEE GI HE T+PYTPQ NG+AERKNRT +EM GEALL
Sbjct: 525 SSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEM---------------GEALLI 569
Query: 988 ACHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFV 1167
ACHI NRI + +SPYE WKGRKPN+ Y +VWGCLAY + DP ++KLG R I+ FV
Sbjct: 570 ACHILNRIPMKKNEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFV 629
Query: 1168 GYARNSKAYRLLDDKTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKIN 1347
GYA NSKAYRLLD ++ VIIESR+VEFFE+ S VPTS G S ET +K+
Sbjct: 630 GYASNSKAYRLLDLESNVIIESREVEFFENWLSDSNFQ-----VPTSVGESLEETPSKVV 684
Query: 1348 E----PRRSTRARKE 1380
E PR+S RARKE
Sbjct: 685 EQPIVPRKSQRARKE 699
Score = 73.6 bits (179), Expect = 5e-10
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 TVHVCDSRDKFVDYHKVTGKQVI-MANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSI 178
T+HV + F + G Q + M N R+ V G GT+++ FTSGK VTL NV +VP +
Sbjct: 266 TIHVTYYKSXFKTFEDAKGDQEVQMGNEGRSKVLGKGTIEVAFTSGKKVTLINVLYVPDM 325
Query: 179 PKCLISVSKLDEHGFKITFESRKVVISKHGVFVEKDTM*EGCI 307
K L+S L + G K FES K+++SK G FV K +G I
Sbjct: 326 NKNLVSGDFLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMI 368
>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
Length = 1234
Score = 367 bits (941), Expect = e-112
Identities = 199/375 (53%), Positives = 245/375 (65%), Gaps = 7/375 (1%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVC---SISLWHKRLAHTNV 447
GKGY GM ++ N +++++ ST +C S+ LWH RLAH +
Sbjct: 407 GKGYSCDGMIKLCT-----------NDNIIKMA---STSAYMCDSNSLFLWHNRLAHVGL 452
Query: 448 KNIEKMKNNGLIKFQNKDFEKCETCVKSKFVKKPFPTVKRETTLLELIHSDICELNGILT 627
I+++ GLI K FEKCE CVKSK +KKPF +V+R + LL+L+HSD+CELNG+LT
Sbjct: 453 STIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLVHSDLCELNGMLT 512
Query: 628 RGGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYF 807
RGG E F++FKVYK EVENQLGK IK+LRSDRGGEYF
Sbjct: 513 RGGN----------------------SETFNAFKVYKTEVENQLGKNIKVLRSDRGGEYF 550
Query: 808 TGEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLA 987
+ EF++FCEE GI HE T+PYTPQ NG+AERKNRT +EMVN ML + L NLWGEAL
Sbjct: 551 SSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALFT 610
Query: 988 ACHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFV 1167
ACHI NRI + +SPYE WKGRKPN+ Y +VWGCLAY + DP ++KLG R I+ FV
Sbjct: 611 ACHILNRIPMKKNEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFV 670
Query: 1168 GYARNSKAYRLLDDKTGVIIESRDVEFFEDKFSKDVENSHAPLVPTSCGSSRGETSTKIN 1347
GYA NSKAYRLLD ++ VIIESR+VEFFE+ S NS VP S G S ET +K+
Sbjct: 671 GYASNSKAYRLLDLESNVIIESREVEFFENLLSD--SNSQ---VPXSVGESLEETPSKVV 725
Query: 1348 E----PRRSTRARKE 1380
E PR+S RARKE
Sbjct: 726 EQPIVPRKSQRARKE 740
Score = 74.3 bits (181), Expect = 3e-10
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 TVHVCDSRDKFVDYHKVTGKQVI-MANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSI 178
TVHV + F + G Q + M N ++ V G GT+++ FTSGK VTL NV +VP +
Sbjct: 314 TVHVTYDKSLFKTFEDAKGBQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLTNVLYVPDM 373
Query: 179 PKCLISVSKLDEHGFKITFESRKVVISKHGVFVEKDTM*EGCI 307
K L+S L + G K FES K+++SK G FV K +G I
Sbjct: 374 NKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMI 416
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 334 bits (856), Expect(2) = e-112
Identities = 182/387 (47%), Positives = 243/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+TF DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R+WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYR-------LLDDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR +LD G IIESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVLDMHVGTIIESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-112
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 332 bits (851), Expect(2) = e-111
Identities = 181/387 (46%), Positives = 241/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP K R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKSSKCHSCVQSKQPRKPHKAAKERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAE+ENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEIENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSCGS 1317
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1318 SR--GETSTKINE------PRRSTRAR 1374
S T ++E PRRS R R
Sbjct: 747 SEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-111
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 332 bits (850), Expect(2) = e-111
Identities = 181/387 (46%), Positives = 241/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 270 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 317
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LLEL+HSD+CE+NG+LT+
Sbjct: 318 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLALLELLHSDLCEMNGVLTK 377
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 378 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 437
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 438 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 497
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 498 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 557
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 558 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 617
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 618 PEQTEHTHELVSEEDVSEAPRRSKRQR 644
Score = 100 bits (250), Expect(2) = e-111
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 179 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 238
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 239 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 271
>gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 330 bits (845), Expect(2) = e-110
Identities = 182/387 (47%), Positives = 242/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDVEN-SHAP--LVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N S+ P ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHNGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 330 bits (845), Expect(2) = e-110
Identities = 182/387 (47%), Positives = 242/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDVEN-SHAP--LVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N S+ P ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHNGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 330 bits (845), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 241/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+TF DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+A+RKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAKRKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKHKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 329 bits (844), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 239/387 (61%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 486 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 533
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 534 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 593
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 594 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 653
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 654 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKTWWGEALLTS 713
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 714 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 773
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P S
Sbjct: 774 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPNSITP 833
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 834 PEQTEHTHELVSEEDVSEAPRRSKRQR 860
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 395 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 454
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 455 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 487
>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 329 bits (844), Expect(2) = e-110
Identities = 181/387 (46%), Positives = 240/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 488 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 535
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 536 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 595
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 596 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 655
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 656 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 715
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NRI +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 716 NHVLNRIPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 775
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 776 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 835
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 836 PEQTEHTHELVSEEDVSEAPRRSKRQR 862
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 397 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 456
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 457 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 489
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 329 bits (843), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 240/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 329 bits (843), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 240/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 884 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 931
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 932 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 991
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 992 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 1051
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 1052 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 1111
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 1112 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 1171
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 1172 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 1231
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 1232 PEQTEHTHELVSEEDVSEAPRRSKRQR 1258
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 793 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 852
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 853 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 885
>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 329 bits (843), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 240/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 329 bits (843), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 240/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400
>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1320
Score = 329 bits (843), Expect(2) = e-110
Identities = 180/387 (46%), Positives = 240/387 (62%), Gaps = 21/387 (5%)
Frame = +1
Query: 277 GKGYYVGGMYRVDDSSGSVGKIQNLNVSVVELPHFESTDNSVCSISLWHKRLAHTNVKNI 456
GKGY GG++R S + ++ SV + ++WH RL H N +
Sbjct: 399 GKGYECGGLFRFSLSDFCNKSVNHICGSVDD------------EANVWHSRLCHINFGLM 446
Query: 457 EKMKNNGLI-KFQNKDFEKCETCVKSKFVKKPFPTVK-RETTLLELIHSDICELNGILTR 630
++ + LI KF KC +CV+SK +KP + R LEL+HSD+CE+NG+LT+
Sbjct: 447 SRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTK 506
Query: 631 GGKRYFITFCDDSSRYLYVYLLRSKDEAFDSFKVYKAEVENQLGKRIKILRSDRGGEYFT 810
GGKRYF+T DD++R+ YVYLL++KDEA D FK+YKAEVENQL ++IK LRSDRGGE+F+
Sbjct: 507 GGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFS 566
Query: 811 GEFDAFCEENGIKHERTSPYTPQQNGLAERKNRTLVEMVNCMLNQSGLPTNLWGEALLAA 990
EFD FCEE+GI HERT PY+P+ NG+AERKNRTL ++VN ML+ +GLP WGEALL +
Sbjct: 567 NEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTS 626
Query: 991 CHIHNRITSRVIRMSPYESWKGRKPNLDYVRVWGCLAYYRTPDPKRSKLGARGIRSIFVG 1170
H+ NR+ +R +PYE W GRKP+L Y+R WGCLA P K+ KLG + + +F+G
Sbjct: 627 NHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLG 686
Query: 1171 YARNSKAYRLL-------DDKTGVIIESRDVEFFEDKF-SKDV---ENSHAPLVPTSC-- 1311
YA +S AYR L D G I+ESRD FFE F KD N + ++P+S
Sbjct: 687 YAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITP 746
Query: 1312 GSSRGETSTKINE------PRRSTRAR 1374
T ++E PRRS R R
Sbjct: 747 PEQTEHTHELVSEEDVSEAPRRSKRQR 773
Score = 100 bits (250), Expect(2) = e-110
Identities = 51/93 (54%), Positives = 60/93 (64%)
Frame = +2
Query: 5 VHVCDSRDKFVDYHKVTGKQVIMANRDRADVCGFGTVKLKFTSGKVVTLQNVYHVPSIPK 184
VHVC F Y G V+M N A V G GTV LKFTSGK+V L+NV HVPSI +
Sbjct: 308 VHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDR 367
Query: 185 CLISVSKLDEHGFKITFESRKVVISKHGVFVEK 283
L+S S+L GFK+ FES KVV+SKHG F+ K
Sbjct: 368 NLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGK 400