BLASTX nr result

ID: Chrysanthemum21_contig00040511 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00040511
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH92941.1| hypothetical protein Ccrd_004978 [Cynara carduncu...    62   2e-08
ref|XP_021997117.1| golgin candidate 5-like isoform X3 [Helianth...    61   3e-08
ref|XP_021997116.1| golgin candidate 5-like isoform X2 [Helianth...    61   3e-08
ref|XP_021997114.1| golgin candidate 5-like isoform X1 [Helianth...    61   3e-08
gb|KVH97984.1| TATA element modulatory factor 1 DNA binding, par...    60   9e-08
ref|XP_023761863.1| golgin candidate 5-like [Lactuca sativa] >gi...    54   9e-06

>gb|KVH92941.1| hypothetical protein Ccrd_004978 [Cynara cardunculus var. scolymus]
          Length = 753

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
 Frame = -3

Query: 379 VETSTIIDEQANEIADGPLETKLALPEVEESIAEKPIADN-DKSEKVIITAMVQREAETG 203
           +ET+ ++ E+A ++A    ET +ALPE  +SI EKP+  N   SE+       + E E  
Sbjct: 65  LETNNLVSEEAEKLA----ETNIALPE-GDSITEKPVGSNIGISEEATTATNNENEVEAS 119

Query: 202 LHAEPTADHAEQLEVSEVPDHKA------------TEHESILSSKDQVARTAHEPDEVEP 59
             AE + +H +QLE  +   +K             T+ ES  +S+DQV    H+P+EV+ 
Sbjct: 120 SIAESSVNHPDQLEFPDHTHYKESPEFGFSEDLGLTKLES-RNSEDQVFGDGHQPNEVDD 178

Query: 58  PLDLQKTD 35
            +DLQKT+
Sbjct: 179 GIDLQKTE 186


>ref|XP_021997117.1| golgin candidate 5-like isoform X3 [Helianthus annuus]
          Length = 848

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = -3

Query: 322 ETKLALPEVEESIAEKPIAD-NDKSEKVIITAMVQREAETGLHAEPTADHAEQLEVSEVP 146
           ET +   +  ES  E  I +  D+   + +     +++  G+  EP+ADH + LE    P
Sbjct: 115 ETHVTASDEVESRDETIIDELADELAAIALNTSNAQKSHIGISEEPSADHTDPLEF---P 171

Query: 145 DHKATEHESILSSKDQVARTAHEPDEVEPPLDLQKTDIADEPKRQEE 5
           DHK TE ES  SS+DQ A    E + V  PLDLQKT+  +E KRQEE
Sbjct: 172 DHKLTEPEST-SSEDQAAGIVLESNAVSQPLDLQKTE--EESKRQEE 215


>ref|XP_021997116.1| golgin candidate 5-like isoform X2 [Helianthus annuus]
          Length = 884

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = -3

Query: 322 ETKLALPEVEESIAEKPIAD-NDKSEKVIITAMVQREAETGLHAEPTADHAEQLEVSEVP 146
           ET +   +  ES  E  I +  D+   + +     +++  G+  EP+ADH + LE    P
Sbjct: 113 ETHVTASDEVESRDETIIDELADELAAIALNTSNAQKSHIGISEEPSADHTDPLEF---P 169

Query: 145 DHKATEHESILSSKDQVARTAHEPDEVEPPLDLQKTDIADEPKRQEE 5
           DHK TE ES  SS+DQ A    E + V  PLDLQKT+  +E KRQEE
Sbjct: 170 DHKLTEPEST-SSEDQAAGIVLESNAVSQPLDLQKTE--EESKRQEE 213


>ref|XP_021997114.1| golgin candidate 5-like isoform X1 [Helianthus annuus]
 ref|XP_021997115.1| golgin candidate 5-like isoform X1 [Helianthus annuus]
 gb|OTG04306.1| putative TATA element modulatory factor 1 TATA binding protein
           [Helianthus annuus]
          Length = 886

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = -3

Query: 322 ETKLALPEVEESIAEKPIAD-NDKSEKVIITAMVQREAETGLHAEPTADHAEQLEVSEVP 146
           ET +   +  ES  E  I +  D+   + +     +++  G+  EP+ADH + LE    P
Sbjct: 115 ETHVTASDEVESRDETIIDELADELAAIALNTSNAQKSHIGISEEPSADHTDPLEF---P 171

Query: 145 DHKATEHESILSSKDQVARTAHEPDEVEPPLDLQKTDIADEPKRQEE 5
           DHK TE ES  SS+DQ A    E + V  PLDLQKT+  +E KRQEE
Sbjct: 172 DHKLTEPEST-SSEDQAAGIVLESNAVSQPLDLQKTE--EESKRQEE 215


>gb|KVH97984.1| TATA element modulatory factor 1 DNA binding, partial [Cynara
           cardunculus var. scolymus]
          Length = 792

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 54/137 (39%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
 Frame = -3

Query: 376 ETSTIIDEQANEIADGPLETKLALPEVEESIAEKPIADN-DKSEKVIITAMVQREAETGL 200
           E+S  + E A +IAD PLE  +A+ E  E++AEK  A N   S++   TA    EAE   
Sbjct: 164 ESSIALSEDA-DIADKPLEINVAISEYAENVAEKSAATNIAVSDETTTTAADHSEAEVDS 222

Query: 199 HAEPTADHAEQLEV---------SEVPDHKATE--HESILSSKDQVARTAHEPDEVEPPL 53
            AE +ADHAEQ E          SEV   K +E   +   +  DQV  T+ E +EV P  
Sbjct: 223 RAELSADHAEQSEFVVRVLSRDSSEVGSSKKSESIQDESTNLSDQVVVTS-ELNEVHPAP 281

Query: 52  DLQKTDIADEPKRQEEE 2
           DL K +  D  K Q EE
Sbjct: 282 DLPKDE--DGLKIQLEE 296


>ref|XP_023761863.1| golgin candidate 5-like [Lactuca sativa]
 gb|PLY86902.1| hypothetical protein LSAT_5X130960 [Lactuca sativa]
          Length = 886

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
 Frame = -3

Query: 379 VETSTIIDEQANEIADGPLETKLALPEVEESIAEKPI-ADNDKSEKVIITAMVQREAETG 203
           VETS     +  E  + PLET   L E   S  EK +  D ++SE+ +     + E    
Sbjct: 108 VETS-----KPEEHQNHPLETNNPLLEEANSRTEKSVETDVEESEEAVTIDKDESETSDK 162

Query: 202 LHAEPTADHAEQLEVSEVPDHKATEHESILSSKDQVARTAHEPDEVEPPLDLQKTDIADE 23
           L AE   DH +              H    +S+DQVA T+ E +EV   LDLQKT+  DE
Sbjct: 163 LEAEAGVDHVD--------------HAESTNSEDQVAGTSLESNEVNIVLDLQKTE--DE 206

Query: 22  PKRQEEE 2
            K QEEE
Sbjct: 207 VKTQEEE 213


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