BLASTX nr result

ID: Chrysanthemum21_contig00040381 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00040381
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023772528.1| uncharacterized protein LOC111921196 [Lactuc...    39   5e-08
gb|KVI07364.1| hypothetical protein Ccrd_014293 [Cynara carduncu...    41   3e-06

>ref|XP_023772528.1| uncharacterized protein LOC111921196 [Lactuca sativa]
 gb|PLY78719.1| hypothetical protein LSAT_9X46880 [Lactuca sativa]
          Length = 553

 Score = 38.5 bits (88), Expect(3) = 5e-08
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +3

Query: 3   DFEYTSSPNPNDPANKKGTVTFYKPVSIPDGFF 101
           DFE+ +S  P      K  VTFYKPVSIP+GFF
Sbjct: 58  DFEFIASYTPK---KSKTGVTFYKPVSIPEGFF 87



 Score = 34.7 bits (78), Expect(3) = 5e-08
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 327 EPDLEQVRCVREDLTAD 377
           EPDLE+VRCVR+DLT D
Sbjct: 162 EPDLEEVRCVRDDLTED 178



 Score = 30.8 bits (68), Expect(3) = 5e-08
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 136 KLRGAYVLVARDARYKTTDDSPHPPLKSPV 225
           +LRG +V+VARD +     D+  PPLKSP+
Sbjct: 99  QLRG-HVIVARDTQNTAVTDAEFPPLKSPL 127


>gb|KVI07364.1| hypothetical protein Ccrd_014293 [Cynara cardunculus var. scolymus]
          Length = 555

 Score = 40.8 bits (94), Expect(3) = 3e-06
 Identities = 21/34 (61%), Positives = 22/34 (64%)
 Frame = +3

Query: 3   DFEYTSSPNPNDPANKKGTVTFYKPVSIPDGFFA 104
           DFE  SS  P     K G VTFYKPV IPDGFF+
Sbjct: 58  DFECISSYTPKK--GKTGGVTFYKPVGIPDGFFS 89



 Score = 33.1 bits (74), Expect(3) = 3e-06
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
 Frame = +3

Query: 327 EPDLEQVRCVREDLT-----ADVQYVTTTSFSL--TKPCK 425
           EPDL +VRCVR+DLT      DV     +SF +  TK CK
Sbjct: 163 EPDLGEVRCVRDDLTDNCEVDDVILSVVSSFKVWSTKACK 202



 Score = 23.9 bits (50), Expect(3) = 3e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 139 LRGAYVLVARDARYKTTDDSPHPPLKSPV 225
           LRG YVLVARDA      ++    L+SP+
Sbjct: 101 LRG-YVLVARDAGDAAVSETERSLLESPL 128


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