BLASTX nr result

ID: Chrysanthemum21_contig00040355 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00040355
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06316.1| Calmodulin binding protein-like protein [Cynara c...    76   3e-13
ref|XP_021983997.1| calmodulin-binding protein 60 A-like [Helian...    73   3e-12

>gb|KVI06316.1| Calmodulin binding protein-like protein [Cynara cardunculus var.
           scolymus]
          Length = 575

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
 Frame = -3

Query: 401 VDSQFLVKLAIKHLKTLKYFEDETSIKRSLQSSTSIISLPSANRGLGTCKTTIRPPRPSS 222
           V+++ L+K A +HL+ L   +DETS+   LQS T   SLPS N+ LGT          SS
Sbjct: 302 VEAKKLIKFACEHLEVLLPVKDETSLIEHLQSGTGFSSLPS-NQSLGTSMIN----DTSS 356

Query: 221 HENYSSPDLTESTNNLNSN---MGHHTNRAPIVTPQPDKLKEKVPFDDVNLYSTKDAEHN 51
               S P L  + +NL+S+    G  TN+AP VT Q ++ KEK PFDD  +Y   D + +
Sbjct: 357 RATCSFPSLIGAPDNLDSSNLHTGESTNQAPAVTSQSERGKEKAPFDDELIYCPDDYQEH 416

Query: 50  F 48
           F
Sbjct: 417 F 417


>ref|XP_021983997.1| calmodulin-binding protein 60 A-like [Helianthus annuus]
 gb|OTG16470.1| putative CALMODULIN-BINDING PROTEIN60 [Helianthus annuus]
          Length = 565

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
 Frame = -3

Query: 416 SDEQKVDSQFLVKLAIKHLKTLKYFEDETSIKRSLQSSTSIISLPSANRGLGTCKTTIRP 237
           +D QK ++Q LVK A ++LK L YFEDETS+K+ LQS     SLPS   G         P
Sbjct: 353 TDRQKDEAQNLVKFASQNLKALDYFEDETSLKKHLQSDPGFTSLPSITDG---------P 403

Query: 236 PRPSSHENYSSPDLTESTNNLNSNMGHHTNRAPIVTPQPDKLKEKVPFDDVNLYSTK-DA 60
           P  SS        + E+  N       + N+ P  T Q ++ KEKVPFDD  +Y+T    
Sbjct: 404 PTTSS-------QVAEACLN-------NLNQTPFETSQSERGKEKVPFDDEMIYATNYYQ 449

Query: 59  EH--------------NFGTSTAHNSTEP 15
           EH              NF ++T+  + EP
Sbjct: 450 EHISFHPPTLNGPNGVNFWSATSSQAAEP 478


Top