BLASTX nr result

ID: Chrysanthemum21_contig00039802 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039802
         (703 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY94880.1| hypothetical protein LSAT_2X101141 [Lactuca sativa]     75   3e-14

>gb|PLY94880.1| hypothetical protein LSAT_2X101141 [Lactuca sativa]
          Length = 86

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 44/86 (51%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +2

Query: 77  MICKPVPXXXXXXXXXXXXXXXGFEKHTXXXXXXXXXXXXXX--SHLTSLSTDPSMHKGA 250
           M CKP+                G+E+HT                S LTSLSTDPS  KGA
Sbjct: 1   MTCKPLFFLFFLIFFHLLVMSFGYERHTFPTERFQPRRLLKTAASSLTSLSTDPSKLKGA 60

Query: 251 AMNELQTSVQDSLRKRPPSKSNPSHN 328
           AMNE QTSV+DSLRKRPPS SNPSHN
Sbjct: 61  AMNEPQTSVEDSLRKRPPSASNPSHN 86


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