BLASTX nr result

ID: Chrysanthemum21_contig00039763 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039763
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89762.1| Armadillo-type fold [Cynara cardunculus var. scol...    42   7e-07

>gb|KVH89762.1| Armadillo-type fold [Cynara cardunculus var. scolymus]
          Length = 454

 Score = 41.6 bits (96), Expect(2) = 7e-07
 Identities = 20/29 (68%), Positives = 21/29 (72%)
 Frame = +1

Query: 427 LQMLSHIPRHQLCAIIVFLPLLLKPFFSE 513
           LQMLSH P H+ CAI VFLP LLK   SE
Sbjct: 232 LQMLSHSPEHRSCAITVFLPHLLKALVSE 260



 Score = 39.3 bits (90), Expect(2) = 7e-07
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = +2

Query: 320 VKPNAVSVQFLGSIPPNGCGMHLIIGNLLWDSYNVT 427
           VK   VS    GSI  NGC +++  GNLLWD  NVT
Sbjct: 196 VKGKPVSESTSGSILANGCSVNIFTGNLLWDICNVT 231


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