BLASTX nr result

ID: Chrysanthemum21_contig00039554 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039554
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93910.1| Ubiquitin-conjugating enzyme, active site-contain...    99   4e-21
ref|XP_023770016.1| probable ubiquitin-conjugating enzyme E2 37 ...    85   3e-16
ref|XP_021996607.1| probable ubiquitin-conjugating enzyme E2 37 ...    75   7e-13

>gb|KVH93910.1| Ubiquitin-conjugating enzyme, active site-containing protein
           [Cynara cardunculus var. scolymus]
          Length = 488

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 23/148 (15%)
 Frame = -3

Query: 482 CCNGPKRKKLGLTGNKPSFRFSGLTKNRGSDN--NVGTGGSVVINMLKAPQADQKSKNSK 309
           C + PKRKKLGLTG KPSF FS +  NR +D   N+G+GGS         +  +K  N+ 
Sbjct: 347 CLSNPKRKKLGLTGKKPSFGFSSVAPNRENDKKWNMGSGGS-------KGKLGEKGMNTN 399

Query: 308 PTKFPPKPLQVLAEKENCKLVLKVNVEM---HNSKH-----------------NAEGVIV 189
           PTK P KPLQVL EK    L L  + E+      KH                 ++EGVIV
Sbjct: 400 PTKLPRKPLQVLEEKHTHDLNLTADAEILRKSGLKHDGERSDDGILEEKEGLCDSEGVIV 459

Query: 188 LDSEDNEEEMARSC-SRRLISQRLLVGK 108
           LDSED+EEE + S  SRRLI+++ L+GK
Sbjct: 460 LDSEDSEEETSGSLNSRRLIARKRLLGK 487


>ref|XP_023770016.1| probable ubiquitin-conjugating enzyme E2 37 [Lactuca sativa]
 gb|PLY80703.1| hypothetical protein LSAT_5X103420 [Lactuca sativa]
          Length = 375

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 59/140 (42%), Positives = 78/140 (55%), Gaps = 15/140 (10%)
 Frame = -3

Query: 482 CCNGPKRKKLGLTGNKPSFRFSGLTKNRGSDNNVGTGGSVVINMLKAPQADQKSKNSKPT 303
           C   PKRKKLGL+G K S     + +N+ +D N  TG     NM K PQ D    N KPT
Sbjct: 240 CFTNPKRKKLGLSGKKQSLGLLSIPQNKENDYNGKTGSCGGNNMSKVPQDD----NGKPT 295

Query: 302 KFPPKPLQVLAEKENCKLVLKVN------VEMHNSKHNAEG--------VIVLDSEDNEE 165
           K   KPLQV+ E +N  + +KV+       ++ +    AEG        VIVLDSED+EE
Sbjct: 296 KL-RKPLQVMEENDNHNMKVKVDHGNSTTSDLKDCGERAEGEGLCDLGEVIVLDSEDSEE 354

Query: 164 EMARSC-SRRLISQRLLVGK 108
           E   +  SRRLI+++ L+GK
Sbjct: 355 ETTNTMKSRRLIARKRLLGK 374


>ref|XP_021996607.1| probable ubiquitin-conjugating enzyme E2 37 [Helianthus annuus]
 gb|OTG03819.1| putative ubiquitin-conjugating enzyme/RWD-like protein [Helianthus
           annuus]
          Length = 456

 Score = 75.5 bits (184), Expect = 7e-13
 Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
 Frame = -3

Query: 470 PKRKKLGLTGNKPSFRFSGLTKNRGSDNNVGTGGSVVINMLKAPQADQKSKNSKPTKFPP 291
           PKRKKLGLTG KPS  F G+ +N+ +D+ V T  S                     K P 
Sbjct: 342 PKRKKLGLTGKKPSTPFLGIPQNKKNDDKVSTPVS---------------------KLPR 380

Query: 290 KPLQVLAEKENCKLVLKVNVEMHN---SKHN----------AEGVIVLDSEDNEEEM-AR 153
           KPLQ L  K N  + L+V+ E+ +   SK++          AEGVIVLDSED+EEE    
Sbjct: 381 KPLQTLEGKHNRNMYLRVDDEVSDTNVSKNDEETLEQGLCEAEGVIVLDSEDSEEEKPVA 440

Query: 152 SCSRRLISQRLLVGK 108
           S  RRLI+++ ++GK
Sbjct: 441 SKPRRLIARKRVLGK 455


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