BLASTX nr result
ID: Chrysanthemum21_contig00039517
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00039517
(788 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_042516817.1| hypothetical protein [Lactobacillus brevis] ... 334 e-112
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 352 e-112
gb|PNX87842.1| retrotransposon protein putative Ty1-copia subcla... 337 e-110
gb|PKI72506.1| hypothetical protein CRG98_007109 [Punica granatum] 343 e-110
dbj|BAA22288.1| polyprotein [Oryza australiensis] 350 e-108
gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus] 350 e-108
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 348 e-107
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 341 e-107
gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposo... 323 e-107
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 339 e-106
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 345 e-106
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 338 e-106
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 339 e-105
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 338 e-105
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 338 e-104
gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escher... 329 e-103
gb|AMY96445.1| gag/pol protein [Momordica dioica] 337 e-103
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 332 e-103
gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escher... 327 e-103
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 332 e-103
>ref|WP_042516817.1| hypothetical protein [Lactobacillus brevis]
gb|KIO93795.1| hypothetical protein QP38_2416 [Lactobacillus brevis]
Length = 283
Score = 334 bits (857), Expect = e-112
Identities = 166/262 (63%), Positives = 197/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WNKRFD IK+FGF Q + E C+Y K SGS V FL+LYVDDIL++GN++ L +K
Sbjct: 15 SRSWNKRFDEVIKAFGFIQVVGESCIYKKVSGSSVVFLILYVDDILLIGNNVEFLESIKD 74
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
YL K FSMKDLGEAAYILGIKIYRDRS+R+IGLSQS Y+D +LKRF M+ SKKGFLP+
Sbjct: 75 YLNKSFSMKDLGEAAYILGIKIYRDRSKRVIGLSQSTYLDNVLKRFKMEQSKKGFLPVLQ 134
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS C +T + M+ VPYASA+GSIMYA+ CTRPDV+ A ++ R Q NP V H
Sbjct: 135 GTKLSKTQCPATDEDREHMRSVPYASAIGSIMYAMMCTRPDVSLAISMAGRSQSNPAVHH 194
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYL+ TKEMFLVYGG D EL V G+ DASF TD DD+KSQT YVF++N GA
Sbjct: 195 WTAVKNILKYLKRTKEMFLVYGG--DEELAVKGYVDASFDTDPDDSKSQTRYVFILNEGA 252
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V W S KQ+ +A S EAEY+A
Sbjct: 253 VSWCSSKQSVVADSTCEAEYMA 274
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 352 bits (904), Expect = e-112
Identities = 175/262 (66%), Positives = 206/262 (78%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD EIK FGF +N +EPCVY K SGS + L+LYVDDIL++GN IP L VK+
Sbjct: 531 SRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLESVKS 590
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L K FSMKDLG+AAYILGI+IYRDRS+RLIGLSQ YIDK+L RFNMQNSK+GFLPM
Sbjct: 591 SLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAH 650
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS C +T E +M +PYASA+GSIMYA+ CTRPDV++A ++TSRYQ +P H
Sbjct: 651 GINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGH 710
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK++FLVYGG D EL V G+ DASFQTDKDD +SQ+G+VF++NGGA
Sbjct: 711 WTAVKNILKYLRRTKDVFLVYGG--DEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGA 768
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 769 VSWKSSKQETVADSTTEAEYIA 790
>gb|PNX87842.1| retrotransposon protein putative Ty1-copia subclass, partial
[Trifolium pratense]
Length = 511
Score = 337 bits (864), Expect = e-110
Identities = 164/262 (62%), Positives = 201/262 (76%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RF+ I+ F F + +EPCVY K SGS + FLVLYVDDIL+ GN IPS+ K
Sbjct: 249 SRSWNIRFNNTIEKFNFVKCEEEPCVYKKISGSSIIFLVLYVDDILLFGNDIPSMQSTKV 308
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+L + FSMKDLGEAAYILGIKIYRDRS+RL+GLSQS YID ILKR+NM+ SK+G+LP+ +
Sbjct: 309 WLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGM 368
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS + C T E RM +VPYASAVG+IMY + CTRPDVA+A +TSRYQ NPG +H
Sbjct: 369 GVSLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEH 428
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W+ VK ILKYLR TK+ FL+YG ++EL + G+ DASF +DKDD+KS +GYVF +NGGA
Sbjct: 429 WKVVKTILKYLRRTKDQFLIYG---NSELSLKGYTDASFASDKDDSKSISGYVFTLNGGA 485
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
+ WKS KQ T+A S TEAEYIA
Sbjct: 486 ISWKSSKQATVADSTTEAEYIA 507
>gb|PKI72506.1| hypothetical protein CRG98_007109 [Punica granatum]
Length = 783
Score = 343 bits (881), Expect = e-110
Identities = 173/262 (66%), Positives = 204/262 (77%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD IK FGF +N DEPCVY K SGS V FLVLYVDDIL++GN I SL VK
Sbjct: 428 SRSWNLRFDDAIKEFGFIKNEDEPCVYKKVSGSVVIFLVLYVDDILLIGNDILSLQSVKT 487
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+LG+CFSMKDLGEA Y+LGIKIYRDRS RL+GLSQSAYIDK+L RF+MQ+SKKG LPM
Sbjct: 488 WLGRCFSMKDLGEATYVLGIKIYRDRSNRLLGLSQSAYIDKVLWRFSMQDSKKGSLPMLH 547
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS ST E R+ ++PYASA+GSIMYA+ CTR +V++ ++TSRYQ +PG +H
Sbjct: 548 GISLSKAQSPSTREERDRINRIPYASAIGSIMYAMLCTRSNVSYTLSMTSRYQSDPGERH 607
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TKE+FLVYGG + EL V G+ D SFQT+KDD++SQ+GYV +NGGA
Sbjct: 608 WIAVKNILKYLRRTKEIFLVYGG--EEELVVRGYTDVSFQTNKDDSRSQSGYVLCLNGGA 665
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S EAEYIA
Sbjct: 666 VSWKSSKQETVADSTIEAEYIA 687
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 350 bits (899), Expect = e-108
Identities = 177/262 (67%), Positives = 203/262 (77%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD IK FGF +N +E CVY K SGS + FL+LYVDDIL++GN IP L VK+
Sbjct: 951 SRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKS 1010
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRDRS+RLIGLSQS YIDK+LKRFNM +SKKGFLPM
Sbjct: 1011 SLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSH 1070
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS C T E +M VPYASA+GSIMYA+ CTRPDV++A + TSRYQ +PG H
Sbjct: 1071 GINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGH 1130
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFLVYGG D L V+G+ DASFQTDKDD +SQ+G+VF +NGGA
Sbjct: 1131 WTAVKNILKYLRRTKDMFLVYGGEED--LVVSGYTDASFQTDKDDYRSQSGFVFCLNGGA 1188
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 1189 VSWKSSKQDTVADSTTEAEYIA 1210
>gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1325
Score = 350 bits (897), Expect = e-108
Identities = 167/262 (63%), Positives = 211/262 (80%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD ++K FGF +N DEPCVY KASGS ++FL+LYVDDILI+GN+IP L E+K
Sbjct: 956 SRSWNLRFDQKVKEFGFVKNEDEPCVYRKASGSAISFLILYVDDILIIGNNIPMLKEIKH 1015
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+LG CF+M+DLGEAAYILGIKIYR+RS+RL+GL+QS YID++++RF M+NSKKG +PM
Sbjct: 1016 WLGSCFAMQDLGEAAYILGIKIYRNRSKRLLGLTQSTYIDQVMRRFKMENSKKGGVPMTK 1075
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L S E+ +M+ VPYASA+G IMYA+ CTRPDV++A ++TSRYQQNPGV H
Sbjct: 1076 GTVLDKSQAPSEDREIKQMEGVPYASAIGFIMYAMVCTRPDVSYALSMTSRYQQNPGVAH 1135
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFL++GG + EL V + DASFQTD+D ++SQTG+VF +NGGA
Sbjct: 1136 WTAVKNILKYLRRTKDMFLIFGG-VNEELTVKCYTDASFQTDRDTSRSQTGFVFTLNGGA 1194
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ+ +A S TE+EYIA
Sbjct: 1195 VSWKSSKQSVVADSTTESEYIA 1216
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 348 bits (892), Expect = e-107
Identities = 179/264 (67%), Positives = 207/264 (78%), Gaps = 2/264 (0%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD EIK FGF +N +EPCVY K SGS + L+LYVDDIL++GN IP L VKA
Sbjct: 947 SRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLESVKA 1006
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGIKIYRDRSRRLIGLSQS YIDK+L RFNMQN+KKGFLPM
Sbjct: 1007 SLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQNTKKGFLPM-- 1064
Query: 428 NHGLSSQGC--ASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGV 255
+HG+S ST E RM +PYASA+GSIMYA+ CTR DV++A ++TSRYQ +PG
Sbjct: 1065 SHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGE 1124
Query: 254 KHWQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVING 75
HW AVKNILKYLR TK+ FL+YGG D EL V G+ DASFQTDKDD +SQ+G+VF++NG
Sbjct: 1125 CHWTAVKNILKYLRRTKDAFLIYGG--DEELVVNGYTDASFQTDKDDYRSQSGFVFILNG 1182
Query: 74 GAVDWKSKKQTTIAMSATEAEYIA 3
GAV WKS KQ T+A S T+AEYIA
Sbjct: 1183 GAVSWKSSKQETVADSTTKAEYIA 1206
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana]
emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 341 bits (874), Expect = e-107
Identities = 170/262 (64%), Positives = 200/262 (76%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RF+ IK F F +N +EPCVY K SGS V FLVLYVDDIL++GN IP L VK
Sbjct: 598 SRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKT 657
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+LG CFSMKD+GEAAYILGI+IYRDR ++IGLSQ YIDK+L RFNM +SKKGF+PM
Sbjct: 658 WLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSH 717
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS C ST E RM K+PYASA+GSIMYA+ TRPDVA A ++TSRYQ +PG H
Sbjct: 718 GITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESH 777
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W V+NI KYLR TK+ FLVYGG+ EL V+G+ DASFQTDKDD +SQ+G+ F +NGGA
Sbjct: 778 WIVVRNIFKYLRRTKDKFLVYGGS--EELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGA 835
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ+T+A S TEAEYIA
Sbjct: 836 VSWKSTKQSTVADSTTEAEYIA 857
>gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 368
Score = 323 bits (828), Expect = e-107
Identities = 159/262 (60%), Positives = 198/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN +F+ IK F F + +EPCVY + SGS + FL+LYVDDIL++GN IP L K
Sbjct: 47 SRSWNIQFNKTIKKFDFVRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPFLQSTKI 106
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+L + FSMKDLGEAAYILGIKIYRDRS+R++GLSQS YID IL+R+NM+NSK+G+ P+
Sbjct: 107 WLSEQFSMKDLGEAAYILGIKIYRDRSKRMLGLSQSMYIDTILRRYNMENSKRGYFPIGT 166
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS++ C T E RM +VPYASAVG+IMY + CTRPDVAFA + SRYQ NPG ++
Sbjct: 167 GVTLSNEDCPKTLEERTRMNRVPYASAVGAIMYIMTCTRPDVAFAPGVVSRYQANPGEEN 226
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W+ VK ILKYLR T++ FL+YGG EL + G+ DASF +DKDD+KS +GYVF + GGA
Sbjct: 227 WKVVKTILKYLRRTQDQFLIYGG---TELMLKGYTDASFASDKDDSKSISGYVFTLYGGA 283
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 284 VSWKSSKQATVADSTTEAEYIA 305
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 339 bits (869), Expect = e-106
Identities = 170/262 (64%), Positives = 199/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD +K GF +N EPCVY K SGS + FL+LYVDDIL++GN IP L VK
Sbjct: 673 SRSWNIRFDEVVKVLGFFKNEQEPCVYKKISGSALVFLILYVDDILLIGNDIPILESVKT 732
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRDRS+RLIGLSQS YIDK+LKRFNMQ+SKKGFLPM
Sbjct: 733 LLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSH 792
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
+ L C T E +M +PYASA+GSIMYA+ CT PDV++A + T+RYQ +PG H
Sbjct: 793 DINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTCPDVSYALSATNRYQSDPGESH 852
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR T++MFLVYGG EL V G+ DASFQTDKDD +S++G+VF +NGG
Sbjct: 853 WIAVKNILKYLRRTEDMFLVYGG--QEELVVNGYTDASFQTDKDDFRSRSGFVFCLNGGV 910
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 911 VSWKSSKQDTVADSTTEAEYIA 932
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 345 bits (884), Expect = e-106
Identities = 174/262 (66%), Positives = 207/262 (79%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN F ++K FGF+++ DE CVY KASGS VTFLVLYVDDIL+MGN IP+L +VKA
Sbjct: 934 SRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQDVKA 993
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+LGKCF+MKDLGEAAYILGI+I RDR +RLIGLSQ Y++K+LKRF+M+NSKKG LP+Q
Sbjct: 994 WLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQS 1053
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
N LS ST E+A M +VPYASAVGSIMYA+ CTRPDVAFA ++ SRYQ NPG H
Sbjct: 1054 NAKLSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAH 1113
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK M LV GG+ L V G+ DASFQTD+D +SQ+G+VF++NGGA
Sbjct: 1114 WIAVKNILKYLRRTKNMVLVLGGSD--TLRVEGYTDASFQTDRDSGRSQSGWVFLLNGGA 1171
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S E+EYIA
Sbjct: 1172 VTWKSSKQETVADSTCESEYIA 1193
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA93176.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 938
Score = 338 bits (866), Expect = e-106
Identities = 169/262 (64%), Positives = 198/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN FD +K+ GF +N EPCVY K SGS + FL+LYVDDIL++ N IP L VK
Sbjct: 670 SRSWNIHFDEIVKALGFVKNEQEPCVYKKISGSALVFLILYVDDILLIENDIPMLESVKT 729
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IY+DRS+RLIGLSQS YIDK+LKRFNMQ+SKKGFLPM
Sbjct: 730 SLKNSFSMKDLGEAAYILGIRIYKDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSH 789
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L C T E +M +PYASA+GSIMYA+ CTRPDV++A + TS+YQ +PG H
Sbjct: 790 GINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGESH 849
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W A+KNILKYLR TK+MFLVYGG EL V G+ DASFQ DKDD +SQ+G+VF +NGGA
Sbjct: 850 WIALKNILKYLRRTKDMFLVYGG--QEELVVNGYTDASFQIDKDDFRSQSGFVFYLNGGA 907
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 908 VSWKSSKQDTVADSTTEAEYIA 929
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 339 bits (870), Expect = e-105
Identities = 170/262 (64%), Positives = 197/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD +K+ GF +N +EPCVY K SGS + FL+LYVDDIL++GN I L VK
Sbjct: 822 SRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLILYVDDILLIGNDISMLESVKT 881
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRDRS+RLIGLSQS YIDK+LKRFNMQ+SKKGFLPM
Sbjct: 882 SLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSH 941
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L C T E +M +PYASA+GSIMYA+ CTRPDV++A + TSRYQ +PG H
Sbjct: 942 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESH 1001
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFL YGG EL V G+ DASFQ DKDD +SQ+G+VF +NGGA
Sbjct: 1002 WIAVKNILKYLRRTKDMFLAYGG--QEELVVNGYTDASFQIDKDDFRSQSGFVFCLNGGA 1059
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ + S TEAEYIA
Sbjct: 1060 VSWKSSKQDIVVDSTTEAEYIA 1081
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 338 bits (868), Expect = e-105
Identities = 172/262 (65%), Positives = 199/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD +K+ GF +N +EPCVY K SGS + FL+LYVDDIL++GN IP L VK
Sbjct: 813 SRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKT 872
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRDRS+RLIGLSQS YIDK+LKRFNMQ+SKKGFLPM
Sbjct: 873 SLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSH 932
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L C T E +M +PYASA+GSIMYA+ CTR DV++A + TSRYQ + G H
Sbjct: 933 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESH 992
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFLVYG EL V G+ DASFQTDKDD +SQ+G+VF +NGGA
Sbjct: 993 WIAVKNILKYLRRTKDMFLVYG--RQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGA 1050
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 1051 VSWKSSKQDTVADSTTEAEYIA 1072
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 338 bits (868), Expect = e-104
Identities = 172/262 (65%), Positives = 199/262 (75%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD +K+ GF +N +EPCVY K SGS + FL+LYVDDIL++GN IP L VK
Sbjct: 900 SRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKT 959
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRDRS+RLIGLSQS YIDK+LKRFNMQ+SKKGFLPM
Sbjct: 960 SLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSH 1019
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L C T E +M +PYASA+GSIMYA+ CTR DV++A + TSRYQ + G H
Sbjct: 1020 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESH 1079
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFLVYG EL V G+ DASFQTDKDD +SQ+G+VF +NGGA
Sbjct: 1080 WIAVKNILKYLRRTKDMFLVYG--RQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGA 1137
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T+A S TEAEYIA
Sbjct: 1138 VSWKSSKQDTVADSTTEAEYIA 1159
>gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escherichia coli]
Length = 859
Score = 329 bits (843), Expect = e-103
Identities = 160/262 (61%), Positives = 201/262 (76%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD IKSFGF +N DEPCVY K S S +TFLVLYVDDIL+MGN L +K
Sbjct: 552 SRSWNIRFDEAIKSFGFIKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLTTIKV 611
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+L FSMKDLGEA YILGI+IYRDR++R+IGLSQS Y++K+LKRFNM +SK+G LP++
Sbjct: 612 WLSNTFSMKDLGEATYILGIRIYRDRAKRIIGLSQSLYLEKVLKRFNMLDSKRGLLPVRH 671
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS + TP E +M ++PYASA+GS+MYA+ CTRP++A+A +LTSRYQ NPG++H
Sbjct: 672 GIHLSKEMSPKTPEERDKMARIPYASAIGSLMYAMLCTRPNIAYAVSLTSRYQSNPGLEH 731
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W A+KNILKYLR TK++FL+YGG +L + G+ D+ FQ+D DD KS + YVF+ NGGA
Sbjct: 732 WIAIKNILKYLRRTKDLFLIYGG---GDLQLDGYTDSDFQSDIDDRKSTSRYVFICNGGA 788
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ+T A S EAEYIA
Sbjct: 789 VSWKSFKQSTTADSTIEAEYIA 810
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 337 bits (863), Expect = e-103
Identities = 166/262 (63%), Positives = 200/262 (76%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD IK+FGF QN+DE CVY K SGS V FL+LYVDDIL++GN + L +VK
Sbjct: 977 SRSWNIRFDEVIKAFGFIQNVDESCVYKKISGSVVAFLILYVDDILLIGNDVEYLEDVKK 1036
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
+L FSMKDLGEA YILGI+IYRDRS + IG+SQS YIDK+L RF MQ+SKKG LP +
Sbjct: 1037 WLNTSFSMKDLGEAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFRH 1096
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
LS + C TP EV M+ +PY+SA+GS+MYA+ CTRPDV +A ++ SRYQ NPG H
Sbjct: 1097 GIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLMYAMLCTRPDVCYALSIVSRYQSNPGRDH 1156
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR T+ MFLVYGG D +L V G+ D+SFQTDKDD+KSQ+G VF +NGGA
Sbjct: 1157 WTAVKNILKYLRRTRNMFLVYGG--DKDLAVKGYTDSSFQTDKDDSKSQSG-VFTLNGGA 1213
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V W+S KQT +A S EAEY+A
Sbjct: 1214 VSWRSSKQTCVADSTCEAEYVA 1235
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 332 bits (852), Expect = e-103
Identities = 167/262 (63%), Positives = 195/262 (74%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD +K+ GF +N + PCVY K SGS + FL+LYVDDIL++GN IP L V
Sbjct: 816 SRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVNI 875
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRD S+RLIGLS+S YIDK+LK FNMQ+SKKGFLPM
Sbjct: 876 SLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSH 935
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L+ C T E +M +PYASA+GSIMYA+ CTRPDV++ + TSRYQ +P H
Sbjct: 936 GINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESH 995
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFLVYGG EL V G+ DASFQTDKDD +SQ+G+VF +NG A
Sbjct: 996 WIAVKNILKYLRRTKDMFLVYGG--QEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGSA 1053
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T A S TEAEYIA
Sbjct: 1054 VSWKSSKQDTAANSTTEAEYIA 1075
>gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escherichia coli]
Length = 813
Score = 327 bits (837), Expect = e-103
Identities = 161/261 (61%), Positives = 200/261 (76%)
Frame = -1
Query: 785 RQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKAY 606
R WN RFD IKSFGF +N DEPCVY K S S +TFLVLYVDDIL+MGN L +K +
Sbjct: 462 RSWNIRFDEAIKSFGFIKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLTTIKVW 521
Query: 605 LGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQVN 426
L FSMKDLGEA YILGI+IYRDR++R+IGLSQS Y++K+LKRFNM +SK+G L ++
Sbjct: 522 LSNTFSMKDLGEATYILGIRIYRDRAKRIIGLSQSLYLEKVLKRFNMLDSKRGLLLVRHG 581
Query: 425 HGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKHW 246
LS + TP E +M ++PYASA+GS+MYA+ CTRPD+A+A +LTSRYQ NPG++H
Sbjct: 582 IHLSKEMSPKTPEERDKMARIPYASAIGSLMYAMLCTRPDIAYAISLTSRYQSNPGLEHS 641
Query: 245 QAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGAV 66
AVKNILKYLR TK++FL+YGG +L + G+ D+ FQ+D DD KS +GYVF+ NGGAV
Sbjct: 642 IAVKNILKYLRRTKDLFLIYGG---GDLQLDGYTDSDFQSDIDDRKSTSGYVFICNGGAV 698
Query: 65 DWKSKKQTTIAMSATEAEYIA 3
WKS KQ+T A S TEAEYIA
Sbjct: 699 SWKSSKQSTTADSTTEAEYIA 719
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 332 bits (852), Expect = e-103
Identities = 167/262 (63%), Positives = 195/262 (74%)
Frame = -1
Query: 788 SRQWNKRFDGEIKSFGFTQNLDEPCVYHKASGSHVTFLVLYVDDILIMGNHIPSLNEVKA 609
SR WN RFD +K+ GF +N + PCVY K SGS + FL+LYVDDIL++GN IP L V
Sbjct: 874 SRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVNI 933
Query: 608 YLGKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSAYIDKILKRFNMQNSKKGFLPMQV 429
L FSMKDLGEAAYILGI+IYRD S+RLIGLS+S YIDK+LK FNMQ+SKKGFLPM
Sbjct: 934 SLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSH 993
Query: 428 NHGLSSQGCASTPAEVARMKKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGVKH 249
L+ C T E +M +PYASA+GSIMYA+ CTRPDV++ + TSRYQ +P H
Sbjct: 994 GINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESH 1053
Query: 248 WQAVKNILKYLRATKEMFLVYGGNPDAELDVTGFCDASFQTDKDDTKSQTGYVFVINGGA 69
W AVKNILKYLR TK+MFLVYGG EL V G+ DASFQTDKDD +SQ+G+VF +NG A
Sbjct: 1054 WIAVKNILKYLRRTKDMFLVYGG--QEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGSA 1111
Query: 68 VDWKSKKQTTIAMSATEAEYIA 3
V WKS KQ T A S TEAEYIA
Sbjct: 1112 VSWKSSKQDTAANSTTEAEYIA 1133