BLASTX nr result

ID: Chrysanthemum21_contig00039492 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039492
         (473 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI11967.1| hypothetical protein Ccrd_009615 [Cynara carduncu...    63   8e-09
ref|XP_023761018.1| uncharacterized protein LOC111909433 [Lactuc...    58   5e-07

>gb|KVI11967.1| hypothetical protein Ccrd_009615 [Cynara cardunculus var. scolymus]
          Length = 280

 Score = 63.2 bits (152), Expect = 8e-09
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +1

Query: 346 MSSLSGLEIGLCFLFGGVILVFSVELCYLLWWKKKFSK 459
           MSS SGLEIGLCFLFG ++ V S EL YLLWWKK+ SK
Sbjct: 1   MSSFSGLEIGLCFLFGCILFVLSAELYYLLWWKKRLSK 38


>ref|XP_023761018.1| uncharacterized protein LOC111909433 [Lactuca sativa]
          Length = 275

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 346 MSSLSGLEIGLCFLFGGVILVFSVELCYLLWWKKKFSK-CEDI 471
           MSSLSGLEIGLCFLFG ++++ S EL YLL WKK+ S+  EDI
Sbjct: 1   MSSLSGLEIGLCFLFGCILMLLSAELYYLLCWKKRVSQDTEDI 43


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