BLASTX nr result

ID: Chrysanthemum21_contig00039468 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039468
         (646 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019265918.1| PREDICTED: F-box protein At5g07610 [Nicotian...    65   1e-08
ref|XP_009765975.1| PREDICTED: F-box protein At5g07610 [Nicotian...    60   7e-07

>ref|XP_019265918.1| PREDICTED: F-box protein At5g07610 [Nicotiana attenuata]
 gb|OIT35376.1| f-box protein [Nicotiana attenuata]
          Length = 399

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
 Frame = -3

Query: 629 DPPRALFIKKTTLP*LRYDFLFVRDRSR----FLDSGFGLGDSRFDIVQSCNGLVLCCSG 462
           +P   LF+  T++   ++D++    ++     F    F    S   I+QSCNGL+LCCS 
Sbjct: 70  NPALGLFLPSTSVLKPKFDYIHFNSQNPTKPPFKKLKFTKDPSGITILQSCNGLLLCCSN 129

Query: 461 QVGQNRKFYVANPTLSIFKT----FSGCKRGSVR---VVFDPVKSSGYKLFHAESRDSVN 303
           ++ Q   +YV NPT   + T    F G +   +    + FDP+KS  YK+     RDSV+
Sbjct: 130 RIRQPINYYVYNPTTKHYTTLPTSFLGTENSKIHGLSLAFDPIKSPHYKVICI--RDSVS 187

Query: 302 THVREVPTHYNLCERASSFGK*KASRMHLKLNSDIKIIKCLHLVGLCFFCVGISNIPTIC 123
           +     P HY +   +S  G  + S       +D+   K ++  G   +   I N+ ++C
Sbjct: 188 S-----PRHYQIEIYSSETGPWRLSGG--PFIADVNFSKGVYWNGSIHWISTIGNLNSLC 240


>ref|XP_009765975.1| PREDICTED: F-box protein At5g07610 [Nicotiana sylvestris]
 ref|XP_016500165.1| PREDICTED: F-box protein At5g07610-like [Nicotiana tabacum]
          Length = 398

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
 Frame = -3

Query: 515 SRFDIVQSCNGLVLCCSGQVGQNRKFYVANPTLSIF----KTFSGCKRGSVR---VVFDP 357
           S   I+QSCNGL+LCCS ++ Q   +YV NPT   +    K+F G +  ++    + FDP
Sbjct: 111 SGITILQSCNGLLLCCSNRIRQPINYYVYNPTTKHYTTLPKSFLGTENSNIHGLSLAFDP 170

Query: 356 VKSSGYKLFHAESRDSVNTHVREVPTHYNLCERASSFGK*KASRMHLKLNSDIKIIKCLH 177
           +KS  YK+     R+SV++     P HY +   +S  G  + S       +D+   K ++
Sbjct: 171 IKSPRYKVICI--RNSVSS-----PEHYQIEIYSSETGPWRLSGG--PFIADVNFSKGVY 221

Query: 176 LVGLCFFCVGISNIPTIC 123
             G   +   I N+ ++C
Sbjct: 222 WNGSIHWISTIGNLNSLC 239


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