BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039301
         (631 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272182.1| cold shock domain-containing protein 3-like ...   168   1e-48
ref|XP_020251834.1| cold shock domain-containing protein 3-like ...   168   6e-48
ref|XP_020254664.1| cold shock domain-containing protein 3-like ...   168   7e-48
gb|PRQ51221.1| putative RNA-directed DNA polymerase [Rosa chinen...   100   1e-32
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...   129   5e-31
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   127   3e-30
ref|XP_023760790.1| uncharacterized protein LOC111909230 [Lactuc...   121   4e-30
emb|CAH67640.1| H0102C09.1 [Oryza sativa]                             127   5e-30
ref|XP_023158131.1| uncharacterized protein LOC103653943 isoform...   125   9e-30
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]   105   1e-29
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   125   2e-29
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  125   2e-29
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     123   8e-29
gb|AAB82754.1| retrofit [Oryza longistaminata]                        123   8e-29
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]        123   1e-28
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   123   1e-28
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa]                        122   2e-28
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  122   2e-28
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] >gi...   122   3e-28
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]    99   3e-28

>ref|XP_020272182.1| cold shock domain-containing protein 3-like [Asparagus officinalis]
          Length = 252

 Score =  168 bits (426), Expect = 1e-48
 Identities = 77/89 (86%), Positives = 80/89 (89%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVCGIPGHIALNCRNRFNH+YQ +EYRG NSATTG Y  D NWYIDTGATDHLTSDLDRL
Sbjct: 164 QVCGIPGHIALNCRNRFNHSYQPDEYRGGNSATTGGYNGDTNWYIDTGATDHLTSDLDRL 223

Query: 181 SVQERYHGKDQVQVANGAGQGHEENPPIR 267
           S+QERYHGKDQVQVANGAGQGHEEN   R
Sbjct: 224 SIQERYHGKDQVQVANGAGQGHEENASTR 252


>ref|XP_020251834.1| cold shock domain-containing protein 3-like [Asparagus officinalis]
          Length = 312

 Score =  168 bits (426), Expect = 6e-48
 Identities = 77/89 (86%), Positives = 80/89 (89%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVCGIPGHIALNCRNRFNH+YQ +EYRG NSATTG Y  D NWYIDTGATDHLTSDLDRL
Sbjct: 224 QVCGIPGHIALNCRNRFNHSYQPDEYRGGNSATTGGYNGDTNWYIDTGATDHLTSDLDRL 283

Query: 181 SVQERYHGKDQVQVANGAGQGHEENPPIR 267
           S+QERYHGKDQVQVANGAGQGHEEN   R
Sbjct: 284 SIQERYHGKDQVQVANGAGQGHEENASTR 312


>ref|XP_020254664.1| cold shock domain-containing protein 3-like [Asparagus officinalis]
          Length = 316

 Score =  168 bits (426), Expect = 7e-48
 Identities = 77/89 (86%), Positives = 80/89 (89%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVCGIPGHIALNCRNRFNH+YQ +EYRG NSATTG Y  D NWYIDTGATDHLTSDLDRL
Sbjct: 228 QVCGIPGHIALNCRNRFNHSYQPDEYRGGNSATTGGYNGDTNWYIDTGATDHLTSDLDRL 287

Query: 181 SVQERYHGKDQVQVANGAGQGHEENPPIR 267
           S+QERYHGKDQVQVANGAGQGHEEN   R
Sbjct: 288 SIQERYHGKDQVQVANGAGQGHEENASTR 316


>gb|PRQ51221.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1330

 Score =  100 bits (248), Expect(2) = 1e-32
 Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
 Frame = +2

Query: 236 DKDTKKTLLFGKSKGG---LYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVK 406
           DK +K  L  GKS G    L+  P S       H A          WH+RLGHP+S++V 
Sbjct: 470 DKASKALLYRGKSNGEGLFLFKTPKSIPPFHHDHTAFVGAAVKCSLWHQRLGHPSSDIVS 529

Query: 407 SILKSNKLGSSFDNKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQ-VSSG 583
            +L  +++  + D   H C  C   K H+LP++ S+  +  P + VH+D+WGPA  +S  
Sbjct: 530 RMLSLSQVKFNNDQTSHTCSHCLSGKMHRLPFSESISKSVLPFQKVHSDLWGPAPCLSIE 589

Query: 584 GFKYYVSFLDDYSRY 628
           GFKYYV+F+DDY+++
Sbjct: 590 GFKYYVTFIDDYTKF 604



 Score = 68.2 bits (165), Expect(2) = 1e-32
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEE-------------YRGVNSATTGNYINDPNWYIDT 141
           Q+CG+ G +ALNC +R N+AYQ  +               G +S+++ N  N   W  DT
Sbjct: 376 QICGLKGRVALNCHHRSNYAYQGSDPPNSLTAMTARTNCSGASSSSSSNSNNTEVWIGDT 435

Query: 142 GATDHLTSDLDRLSVQERYHGKDQVQVANGAG 237
           GAT H+TSDL  LS+   +   + + + NG G
Sbjct: 436 GATHHMTSDLRNLSIAHPFDSNNTITIGNGEG 467


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
           Japonica Group]
 gb|AAP53032.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1042

 Score =  129 bits (325), Expect = 5e-31
 Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
 Frame = +2

Query: 185 SKSDIMVKIRFRWPTEQDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQ 364
           S + + V+I  ++   +D+ T+ T+L G  + GLYP+P +  + +              +
Sbjct: 296 SDNSVFVEIHSKYFLIKDRTTRSTVLKGPRRHGLYPLPSTSSTKQA-----FAVAPSLER 350

Query: 365 WHRRLGHPTSEVVKSILKSNKLGSSFD-NKFHVCDACQCAKSHQLPYNNSVHVTSYPLEL 541
           WH RLGHP+  +V  ++ SNKL    + NK  VCDACQ AKSHQLPY+NS+ V++ PLEL
Sbjct: 351 WHSRLGHPSIPIVMKVISSNKLPCLRESNKESVCDACQKAKSHQLPYSNSMSVSNKPLEL 410

Query: 542 VHTDVWGPAQVSSGGFKYYVSFLDDYSRYT 631
           +++DVWGPA  S GG K+YVSF+D Y +++
Sbjct: 411 IYSDVWGPASTSFGGKKFYVSFIDSYRKFS 440



 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 35/78 (44%), Positives = 53/78 (67%)
 Frame = +1

Query: 4   VCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRLS 183
           VC   GH+A NC +R++  Y  ++   + +A T ++  D NWY+DTGATDH+TS L++L+
Sbjct: 180 VCYKRGHVAANCWHRYDEDYVPDDK--LVAAATYSHGADSNWYVDTGATDHITSQLEKLN 237

Query: 184 VQERYHGKDQVQVANGAG 237
            +E Y G DQ+  A+GAG
Sbjct: 238 TREVYKGHDQIHTASGAG 255


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  127 bits (320), Expect = 3e-30
 Identities = 68/144 (47%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
 Frame = +2

Query: 203  VKIRFRWPTEQDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLG 382
            V++  R+   +D+ TK  LL G  + GLYP+P S  S  T             +WH RLG
Sbjct: 1364 VEVHPRFFAIKDQVTKNLLLRGPCRNGLYPLPTS--SLATSKQVLGAIKPTMSRWHSRLG 1421

Query: 383  HPTSEVVKSILKSNKLGSSFD-NKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVW 559
            HP+  +V+ ++ SN L    D N+  VC+ACQ AKSHQLPY  S  V++ PLELV +DVW
Sbjct: 1422 HPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAKSHQLPYPKSFSVSNNPLELVFSDVW 1481

Query: 560  GPAQVSSGGFKYYVSFLDDYSRYT 631
            GPA  S GG KYYVSF+DD+S++T
Sbjct: 1482 GPAPTSVGGRKYYVSFIDDFSKFT 1505



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/79 (41%), Positives = 52/79 (65%)
 Frame = +1

Query: 1    QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
            Q+CG  GH+  +C  R++  +  +      +A   +Y  D NWY+DTGATDH+T +LD+L
Sbjct: 1243 QLCGKIGHVVADCWYRYDENFIPDS----KTAAAASYGVDTNWYMDTGATDHITGELDKL 1298

Query: 181  SVQERYHGKDQVQVANGAG 237
            +  E+Y+GK+Q+  A+GAG
Sbjct: 1299 TTHEKYNGKEQIHTASGAG 1317


>ref|XP_023760790.1| uncharacterized protein LOC111909230 [Lactuca sativa]
          Length = 258

 Score =  121 bits (303), Expect = 4e-30
 Identities = 58/79 (73%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVCGIPGH AL C NRFNHAYQ +  RG NSATTG Y  DP WY+D GAT+ LTSDLDRL
Sbjct: 131 QVCGIPGHGALTCCNRFNHAYQNKYDRGGNSATTGIYNTDPYWYVDCGATNLLTSDLDRL 190

Query: 181 SVQERYHGKDQVQVANGAG 237
           +VQ+R+ GKDQVQVANG G
Sbjct: 191 TVQDRHQGKDQVQVANGTG 209


>emb|CAH67640.1| H0102C09.1 [Oryza sativa]
          Length = 1825

 Score =  127 bits (318), Expect = 5e-30
 Identities = 63/134 (47%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +D+ T++T+L G+ + GLYPVP +  S  +             +WH RLGH ++ ++  +
Sbjct: 544 KDQATRRTVLKGRRQKGLYPVPSA--SPPSSAKVVCAVTPSFERWHSRLGHSSAPIISRV 601

Query: 413 LKSNKLGSSFD-NKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSGGF 589
           +  NKL    + NK  VCDAC  AKSHQLPY+ S+ ++S+PLELV +DVWGPA VS G  
Sbjct: 602 ISKNKLPCLDESNKESVCDACLKAKSHQLPYSKSLSISSHPLELVFSDVWGPAPVSVGNK 661

Query: 590 KYYVSFLDDYSRYT 631
           KYYVSF+DDYS++T
Sbjct: 662 KYYVSFIDDYSKFT 675



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/79 (40%), Positives = 53/79 (67%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVC   GH+A +C +RF+  +  ++   + +A    +  D NWY+DTGATDH+TS+L++L
Sbjct: 411 QVCYKRGHVAADCWHRFDEDFVPDDK--LVAAAIHTHARDSNWYVDTGATDHITSELEKL 468

Query: 181 SVQERYHGKDQVQVANGAG 237
           + ++ Y G DQ+  A+G+G
Sbjct: 469 TARDVYKGHDQIHTASGSG 487


>ref|XP_023158131.1| uncharacterized protein LOC103653943 isoform X1 [Zea mays]
 ref|XP_023158132.1| uncharacterized protein LOC103653943 isoform X1 [Zea mays]
          Length = 670

 Score =  125 bits (315), Expect = 9e-30
 Identities = 64/134 (47%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +D+DT+ TLL G    GLYP+P S +       A         +WH RLGHP+ +VV+ +
Sbjct: 416 KDRDTRTTLLKGNCHRGLYPLPSSCHKKL----ALGVNKPSLVRWHDRLGHPSFQVVERV 471

Query: 413 LKSNKLGSSFD-NKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSGGF 589
           L+   L    + NK +VC  CQ AKSHQLPY+ S  V++ PLEL+ +DVWGPA  S G +
Sbjct: 472 LRDYNLPHQVESNKEYVCGPCQQAKSHQLPYSKSSSVSNQPLELIFSDVWGPAPESVGRY 531

Query: 590 KYYVSFLDDYSRYT 631
           KYYVSF+DDYS++T
Sbjct: 532 KYYVSFVDDYSKFT 545



 Score = 87.0 bits (214), Expect = 3e-16
 Identities = 39/79 (49%), Positives = 58/79 (73%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVCG  GH A  C +RF+  +  ++ + V +A T +Y  D NWY+D+GATDH+T +LD+L
Sbjct: 282 QVCGKIGHTADRCWHRFDENFTPDQ-KHVAAAATNSYNVDTNWYMDSGATDHITGELDKL 340

Query: 181 SVQERYHGKDQVQVANGAG 237
           +V+++YHG +QV +ANGAG
Sbjct: 341 AVRDKYHGAEQVHMANGAG 359


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score =  105 bits (261), Expect(2) = 1e-29
 Identities = 59/146 (40%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
 Frame = +2

Query: 230 EQDKDTKKTLLFGKSKGGLYPVPISRYSSRTPH-----------HAXXXXXXXXXQWHRR 376
           ++D+ TK  L  GK + GLY  P+  +S++ P+           H           WH R
Sbjct: 252 KKDRHTKMVLAQGKLENGLYKFPV--FSNKKPYSSVNNASAFHSHFSSTIENKAELWHNR 309

Query: 377 LGHPTSEVVKSILKSNKLGSSFDNKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDV 556
           LGH  S++V  ++ +  + S    K  VC  CQ AKSH+LP   S    S PLELV+TD+
Sbjct: 310 LGHVASDIVSKVMNTCNVASG-KYKSTVCSDCQLAKSHRLPTQLSNFRASKPLELVYTDI 368

Query: 557 WGPAQV-SSGGFKYYVSFLDDYSRYT 631
           WGPA V S+ G KY++ F+DDYSRYT
Sbjct: 369 WGPASVKSTSGAKYFILFVDDYSRYT 394



 Score = 53.1 bits (126), Expect(2) = 1e-29
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYIN-------------DPNWYIDT 141
           Q+CG  GH A  C +RF+ ++Q        S   GN  N             D +WY+D+
Sbjct: 140 QLCGKFGHTAQICYHRFDISFQGGXTTTSPSLNNGNQNNILAMVASFSNSSADESWYLDS 199

Query: 142 GATDHLTSDLDRLSVQERYHGKDQVQVAN 228
           GA+ HLT +L  L+    Y G D+V + N
Sbjct: 200 GASHHLTQNLGNLTSTSPYTGTDRVTIGN 228


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score =  125 bits (313), Expect = 2e-29
 Identities = 64/134 (47%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +D+ T+  LL GK + GLYP+P S +   T   A         +WH RLGHP+  +VK +
Sbjct: 418 KDQVTRDVLLEGKCRHGLYPIPKS-FGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 476

Query: 413 LKSNKLGSSFDN-KFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSGGF 589
           +  N L  S ++    VC+ACQ AKSHQLPY  S  V+ +PLELV +DVWGPA  S G  
Sbjct: 477 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN 536

Query: 590 KYYVSFLDDYSRYT 631
           KYYVSF+DD+S++T
Sbjct: 537 KYYVSFIDDFSKFT 550



 Score = 80.5 bits (197), Expect = 7e-14
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVC   GH A +C  RF+  Y A+E   + +A T +Y  D NWYIDTGATDH+T +L++L
Sbjct: 285 QVCFKRGHTAADCWYRFDEDYVADEK--LVAAATNSYGIDTNWYIDTGATDHITGELEKL 342

Query: 181 SVQERYHGKDQVQVANGAG 237
           + +E+Y+G +Q+  A+GAG
Sbjct: 343 TTKEKYNGGEQIHTASGAG 361


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  125 bits (313), Expect = 2e-29
 Identities = 64/134 (47%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +D+ T+  LL GK + GLYP+P S +   T   A         +WH RLGHP+  +VK +
Sbjct: 418 KDQVTRDVLLEGKCRHGLYPIPKS-FGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 476

Query: 413 LKSNKLGSSFDN-KFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSGGF 589
           +  N L  S ++    VC+ACQ AKSHQLPY  S  V+ +PLELV +DVWGPA  S G  
Sbjct: 477 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN 536

Query: 590 KYYVSFLDDYSRYT 631
           KYYVSF+DD+S++T
Sbjct: 537 KYYVSFIDDFSKFT 550



 Score = 80.5 bits (197), Expect = 7e-14
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVC   GH A +C  RF+  Y A+E   + +A T +Y  D NWYIDTGATDH+T +L++L
Sbjct: 285 QVCFKRGHTAADCWYRFDEDYVADEK--LVAAATNSYGIDTNWYIDTGATDHITGELEKL 342

Query: 181 SVQERYHGKDQVQVANGAG 237
           + +E+Y+G +Q+  A+GAG
Sbjct: 343 TTKEKYNGGEQIHTASGAG 361


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  123 bits (309), Expect = 8e-29
 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
 Frame = +2

Query: 203 VKIRFRWPTEQDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLG 382
           V++  R+   +D+ TK TLL G    GLYP+P S  SS+    A          WH RLG
Sbjct: 398 VEVHPRFFAIKDQITKNTLLRGPCCNGLYPLPASTSSSKQVLGAIKPTVSI---WHSRLG 454

Query: 383 HPTSEVVKSILKSNKLGSSFDNK-FHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVW 559
           HP+ ++V+ ++  N L    ++K   VCDACQ  KSHQLP+  S   +++PLELV +DVW
Sbjct: 455 HPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKSHQLPFLKSTSASNFPLELVFSDVW 514

Query: 560 GPAQVSSGGFKYYVSFLDDYSRYT 631
           GPA  S GG KYYVSF+DD+S++T
Sbjct: 515 GPAPDSVGGRKYYVSFIDDFSKFT 538



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/79 (39%), Positives = 49/79 (62%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           Q+C   GH+  +C     H Y          A   +Y  D NWY+DTGATDH+T++L++L
Sbjct: 277 QLCSKVGHVVADCW----HCYDDSFVPDARVAAAASYGVDSNWYVDTGATDHITNELEKL 332

Query: 181 SVQERYHGKDQVQVANGAG 237
           + ++RY+GK+Q+  A+G+G
Sbjct: 333 TTRDRYNGKEQIHTASGSG 351


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  123 bits (309), Expect = 8e-29
 Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +D+ T+  LL GK + GLYP+P   +   T   A         +WH RLGHP+  +VK +
Sbjct: 414 KDQVTRDVLLEGKCRHGLYPIP-KFFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 472

Query: 413 LKSNKLGSSFDN-KFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSGGF 589
           +  N L  S ++    VC+ACQ AKSHQLPY  S  V+ +PLELV +DVWGPA  S G  
Sbjct: 473 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN 532

Query: 590 KYYVSFLDDYSRYT 631
           KYYVSF+DD+S++T
Sbjct: 533 KYYVSFIDDFSKFT 546



 Score = 80.5 bits (197), Expect = 7e-14
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVC   GH A +C  RF+  Y A+E   + +A T +Y  D NWYIDTGATDH+T +L++L
Sbjct: 281 QVCFKRGHTAADCWYRFDEDYVADEK--LVAAATNSYGIDTNWYIDTGATDHITGELEKL 338

Query: 181 SVQERYHGKDQVQVANGAG 237
           + +E+Y+G +Q+  A+GAG
Sbjct: 339 TTKEKYNGGEQIHTASGAG 357


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score =  123 bits (308), Expect = 1e-28
 Identities = 66/138 (47%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
 Frame = +2

Query: 203 VKIRFRWPTEQDKDTKKTLLFGKSKGGLYPVPISRYSSRTPH--HAXXXXXXXXXQWHRR 376
           V+I  ++   +D+ TK TLL G+S+GGLYP+P+    S TP    A         +WH R
Sbjct: 393 VEIHPKFFCVKDQTTKSTLLQGRSRGGLYPIPLK---STTPQGRQALVSTSSAESRWHSR 449

Query: 377 LGHPTSEVVKSILKSNKLGSSFDNKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDV 556
           LGHP+  VV  +L+ + +  S   +  VCDACQ AKSHQLPY+ SV  +S PLELV +DV
Sbjct: 450 LGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSRSVSRSSAPLELVFSDV 509

Query: 557 WGPAQVSSGGFKYYVSFL 610
           WGPA  S G FKYY+  L
Sbjct: 510 WGPAPQSVGRFKYYLLLL 527



 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAY-------QAEEYRGVNSATTGNYINDPNWYIDTGATDHL 159
           Q+CG  GH    C  RF+ ++       Q    +  +++   +Y  D NWY+DT ATDH+
Sbjct: 261 QLCGKEGHTVHTCWKRFDRSFSGNDVIFQQHHQQAKSASAVSSYGVDTNWYLDTAATDHI 320

Query: 160 TSDLDRLSVQERYHGKDQVQVANGAG 237
           T +L +L+ +ERYHG +QV  AN AG
Sbjct: 321 TGELKKLTTKERYHGNEQVHAANSAG 346


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  123 bits (308), Expect = 1e-28
 Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +DK T + LL GK K GLY +P    S+    H           WHR+LGHP S+V+  +
Sbjct: 326 KDKLTGRILLEGKIKDGLYQLPGGSTSTNKRPHVFFSIKET---WHRKLGHPNSKVLNEV 382

Query: 413 LKSNKLGSSFDNKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSS-GGF 589
           +K   + +S    F  C+ACQ  K+H LP+ NSV     PL+LVH+DVWGPA +SS  GF
Sbjct: 383 MKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGF 442

Query: 590 KYYVSFLDDYSRYT 631
           KYYV FLDD+SR+T
Sbjct: 443 KYYVLFLDDWSRFT 456


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa]
          Length = 1087

 Score =  122 bits (306), Expect = 2e-28
 Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
 Frame = +2

Query: 203 VKIRFRWPTEQDKDTKKTLLFGKSKGGLYPVPISRYSSRTPH--HAXXXXXXXXXQWHRR 376
           V+I  ++   +D+ TK TLL G+S+GGLYP+P+    S TP    A         +WH R
Sbjct: 393 VEIHPKFFCVKDQTTKSTLLQGRSRGGLYPIPLK---STTPQGRQALVSTSSAESRWHSR 449

Query: 377 LGHPTSEVVKSILKSNKLGSSFDNKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDV 556
           LGHP+  VV  +L+ + +  S   +  VCDACQ AKSHQLPY+ SV  +S PLELV +DV
Sbjct: 450 LGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSRSVSRSSAPLELVFSDV 509

Query: 557 WGPAQVSSGGFKYYV 601
           WGPA  S G FKYY+
Sbjct: 510 WGPAPQSVGRFKYYM 524



 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAY-------QAEEYRGVNSATTGNYINDPNWYIDTGATDHL 159
           Q+CG  GH    C  RF+ ++       Q    +  +++   +Y  D NWY+DT ATDH+
Sbjct: 261 QLCGKEGHTVHTCWKRFDRSFSGNDVIFQQHHQQAKSASAVSSYGVDTNWYLDTAATDHI 320

Query: 160 TSDLDRLSVQERYHGKDQVQVANGAG 237
           T +L +L+ +ERYHG +QV  AN AG
Sbjct: 321 TGELKKLTTKERYHGNEQVHAANSAG 346


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  122 bits (306), Expect = 2e-28
 Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSI 412
           +D+ TK  LL G+ + GLYP+P S +   T   A         +WH RLGHP+  +VK +
Sbjct: 415 KDQVTKDILLEGRCRHGLYPIPKS-FGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQV 473

Query: 413 LKSNKLGSSFDN-KFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSGGF 589
           +  N L  S ++    VC+ACQ AKS QLPY  S  V+ +PLELV +DVWGPA  S G  
Sbjct: 474 ISKNNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPESVGRN 533

Query: 590 KYYVSFLDDYSRYT 631
           KYYVSF+DD+S++T
Sbjct: 534 KYYVSFIDDFSKFT 547



 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           QVC   GH A +C  RF+  Y A+E   + +A T +Y  D NWYIDTGATDH+T +L++L
Sbjct: 282 QVCFKRGHTAADCWYRFDEDYVADEK--LAAAATNSYGIDTNWYIDTGATDHITGELEKL 339

Query: 181 SVQERYHGKDQVQVANGAG 237
           + +E+Y+G +Q+  A+GAG
Sbjct: 340 TTKEKYNGNEQIHTASGAG 358


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
 gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1447

 Score =  122 bits (305), Expect = 3e-28
 Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
 Frame = +2

Query: 233 QDKDTKKTLLFGKSKGGLYPVPISRYSSRTP--HHAXXXXXXXXXQWHRRLGHPTSEVVK 406
           +D  TKK L  G  +G LY +P S    R      A         +WH RLGHP S +V+
Sbjct: 412 KDLATKKLLFRGPCRGRLYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASPIVE 471

Query: 407 SILKSNKLGSSFD-NKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPAQVSSG 583
            ++  N L    + NK  VCDACQ  KSHQLPY+ S  ++S+PLEL+++DVWGPA  S G
Sbjct: 472 KVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPALTSVG 531

Query: 584 GFKYYVSFLDDYSRYT 631
           G +YYVSF+ DYS++T
Sbjct: 532 GKQYYVSFIGDYSKFT 547



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/79 (46%), Positives = 54/79 (68%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYINDPNWYIDTGATDHLTSDLDRL 180
           Q+C   GH  +NC  R++  +  +E +   SAT+  Y  D NWY+DT ATDH+T +LD+L
Sbjct: 280 QLCYKRGHTVINCWYRYDEDFVPDE-KYAGSATS--YGIDTNWYVDTSATDHVTGELDKL 336

Query: 181 SVQERYHGKDQVQVANGAG 237
           +V++RY G+DQV  A+GAG
Sbjct: 337 TVRDRYKGQDQVHTASGAG 355


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score = 99.4 bits (246), Expect(2) = 3e-28
 Identities = 56/134 (41%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
 Frame = +2

Query: 236 DKDTKKTLLFGKSKGGLYPVPISRYSSRTPHHAXXXXXXXXXQWHRRLGHPTSEVVKSIL 415
           D+ TK+TLL G  K GLY  P S  +      +          WH RLGHP + ++   L
Sbjct: 329 DQVTKQTLLKGWLKDGLYEFPSSSSTHAFVSTSSIPALTPGAIWHSRLGHPAAPILSKAL 388

Query: 416 KSNKLGSSFD-NKFHVCDACQCAKSHQLPYNNSVHVTSYPLELVHTDVWGPA-QVSSGGF 589
                  SF  NK   C  C  AKSH LPY+ S    S PL L+HTD+WGPA   S+   
Sbjct: 389 AFCNPSVSFQINKIAPCKICPLAKSHSLPYSLSSSHASQPLALIHTDLWGPAPSPSTSSA 448

Query: 590 KYYVSFLDDYSRYT 631
           +Y++ F+DDYSRYT
Sbjct: 449 RYFLLFIDDYSRYT 462



 Score = 54.3 bits (129), Expect(2) = 3e-28
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
 Frame = +1

Query: 1   QVCGIPGHIALNCRNRFNHAYQAEEYRGVNSATTGNYI---------NDPNWYIDTGATD 153
           Q+CG  GH  + C +RF+  YQ     GV+S+   + +         +  +W+ DTGAT 
Sbjct: 237 QLCGKFGHTVVKCYHRFDITYQGTN--GVSSSQDSSPLQAMLTIAPDHQDSWFFDTGATH 294

Query: 154 HLTSDLDRLSVQERYHGKDQVQVANG 231
           HL+     LS  + Y G DQV +A+G
Sbjct: 295 HLSHSAQTLSHVQPYSGADQVTIADG 320