BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039231
         (794 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX81390.1| transposon Tf2-1 polyprotein, partial [Trifolium ...   366   e-123
gb|PNY00428.1| hypothetical protein L195_g023708, partial [Trifo...   367   e-115
gb|PNY17448.1| hypothetical protein L195_g014191 [Trifolium prat...   370   e-115
gb|PNY06477.1| hypothetical protein L195_g002943, partial [Trifo...   343   e-105
gb|PNY06478.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   343   e-105
gb|PKU60797.1| hypothetical protein MA16_Dca027791 [Dendrobium c...   319   e-104
gb|PNX96526.1| transposon Tf2-1 polyprotein, partial [Trifolium ...   337   e-104
gb|OMO79377.1| reverse transcriptase [Corchorus capsularis]           339   e-104
gb|PNX96205.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   335   e-103
gb|PKU80732.1| hypothetical protein MA16_Dca027258 [Dendrobium c...   314   e-102
gb|OMO81561.1| reverse transcriptase [Corchorus capsularis]           335   e-102
gb|OMO73136.1| reverse transcriptase [Corchorus capsularis]           325   e-102
gb|PKU84571.1| hypothetical protein MA16_Dca017958 [Dendrobium c...   310   e-100
gb|OMO55704.1| reverse transcriptase [Corchorus capsularis]           330   e-100
gb|PNX92586.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   328   e-100
gb|OMO55084.1| reverse transcriptase [Corchorus capsularis]           326   e-100
gb|PNX89250.1| retrotransposon Ty-3/Gypsy protein, partial [Trif...   307   1e-99
gb|PRQ35711.1| putative nucleotidyltransferase, Ribonuclease H [...   311   4e-99
gb|PNY13776.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   327   5e-99
gb|PNY18032.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   324   2e-98

>gb|PNX81390.1| transposon Tf2-1 polyprotein, partial [Trifolium pratense]
          Length = 423

 Score =  366 bits (939), Expect = e-123
 Identities = 177/262 (67%), Positives = 211/262 (80%)
 Frame = -1

Query: 791 VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
           +CQ NKY+T  PYG LQPL +P QVW+DISMDFIT LP +   + IWVVVDRLSK+A+FI
Sbjct: 6   ICQYNKYNTHSPYGLLQPLPLPEQVWEDISMDFITNLPLTNQKSTIWVVVDRLSKFAHFI 65

Query: 611 ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
           ALP++ TAA LA +F + I +LHG PK IVSDRDR+F+S+FWR LFK  GTTL FSS+YH
Sbjct: 66  ALPSTFTAATLAPVFISEIYRLHGAPKTIVSDRDRVFVSQFWRALFKGLGTTLAFSSSYH 125

Query: 431 PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
           PQTDGQTEVLNRCLETYLRCFVS+EP+ W + L  AE+WYNTSFHS+I MTPFEALYGR 
Sbjct: 126 PQTDGQTEVLNRCLETYLRCFVSEEPKLWLRYLPLAEFWYNTSFHSAIGMTPFEALYGRK 185

Query: 251 PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
           PP+++ Y+AG S IA+LDE L +K  +L ILK  L+ ARNRM QQA++HR++ NF  G W
Sbjct: 186 PPNMVHYSAGQSTIASLDELLTQKTQILKILKENLLRARNRMIQQANRHRQDHNFAEGDW 245

Query: 71  VYLKL*PYRQVSVHRRRSQKLA 6
           VYLKL PYRQ SVH R SQKLA
Sbjct: 246 VYLKLQPYRQNSVHHRTSQKLA 267


>gb|PNY00428.1| hypothetical protein L195_g023708, partial [Trifolium pratense]
          Length = 1181

 Score =  367 bits (943), Expect = e-115
 Identities = 177/262 (67%), Positives = 212/262 (80%)
 Frame = -1

Query: 791  VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
            VCQ NKYST+ PYG LQPL +P QVW+DISMDFIT+LP +   + IWV+VDRL+K+A+FI
Sbjct: 772  VCQHNKYSTQSPYGLLQPLPLPQQVWEDISMDFITHLPMTHNRSCIWVIVDRLTKFAHFI 831

Query: 611  ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
            ALP S TAA LA IF T I +LHG PK IVSDRDR+F+S+FWR LF   GT+L FSS+YH
Sbjct: 832  ALPGSFTAASLAPIFITEIYRLHGAPKTIVSDRDRVFVSQFWRALFHHLGTSLAFSSSYH 891

Query: 431  PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
            PQ+DGQTEVLNRCLETYLRCFVSDEP+ W + L  AE+WYNTSFH++I MTPFEALYGR 
Sbjct: 892  PQSDGQTEVLNRCLETYLRCFVSDEPRLWLRFLALAEFWYNTSFHTAIGMTPFEALYGRK 951

Query: 251  PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
            PP+++ YT G+S I +LDE L +K  +L +LK  LV ARNRM  QA++HR+++NFEVGQW
Sbjct: 952  PPTLVHYTPGTSKIESLDELLTQKTLVLKVLKENLVKARNRMIIQANQHRQDRNFEVGQW 1011

Query: 71   VYLKL*PYRQVSVHRRRSQKLA 6
            VYLKL PYRQ SVH R S KLA
Sbjct: 1012 VYLKLQPYRQHSVHHRESHKLA 1033


>gb|PNY17448.1| hypothetical protein L195_g014191 [Trifolium pratense]
          Length = 1530

 Score =  370 bits (949), Expect = e-115
 Identities = 177/262 (67%), Positives = 210/262 (80%)
 Frame = -1

Query: 791  VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
            VCQ NKYST+PPYG LQPL +P QVW+DISMDFIT+LPP+   + IWV+VDRL+K+A+FI
Sbjct: 1115 VCQHNKYSTQPPYGLLQPLPLPQQVWEDISMDFITHLPPTHNRSCIWVIVDRLTKFAHFI 1174

Query: 611  ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
            ALPTS TAA LA IF   I +L G PK IVSDRDR+F+S+FWR LF   GT+L FSS+YH
Sbjct: 1175 ALPTSFTAASLAPIFIAEIYRLPGAPKTIVSDRDRVFVSQFWRALFHHLGTSLAFSSSYH 1234

Query: 431  PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
            PQ+DGQTEVLNRCLETYLRCFVSDEPQ W + L  AE+WYNTSFHS+I M+PFEALYGR 
Sbjct: 1235 PQSDGQTEVLNRCLETYLRCFVSDEPQLWLRFLALAEFWYNTSFHSAIGMSPFEALYGRK 1294

Query: 251  PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
            PP+++ YT G+S I  LDE L +K  +L +LK  L  A+NRM  QA++HR++ NFEVGQW
Sbjct: 1295 PPNLVHYTPGTSKINNLDELLTQKTQILKVLKENLAKAQNRMATQANRHRQDHNFEVGQW 1354

Query: 71   VYLKL*PYRQVSVHRRRSQKLA 6
            VYLKL PYRQ SVH R S KLA
Sbjct: 1355 VYLKLQPYRQQSVHHRHSHKLA 1376


>gb|PNY06477.1| hypothetical protein L195_g002943, partial [Trifolium pratense]
          Length = 1336

 Score =  343 bits (879), Expect = e-105
 Identities = 159/261 (60%), Positives = 203/261 (77%)
 Frame = -1

Query: 788  CQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFIA 609
            CQ +KYST+   G LQPL IPS VW DISMDFIT+LPPS G T+IWV++DRL+K+A+FI 
Sbjct: 1068 CQQSKYSTQKTPGLLQPLPIPSDVWRDISMDFITHLPPSKGKTVIWVIIDRLTKFAHFIG 1127

Query: 608  LPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYHP 429
            LPT  +AA +A IF T I +LHG P  IVSDRDR+F+S+FW  LF+L GT L FSSAYHP
Sbjct: 1128 LPTGFSAATIAPIFMTEIHRLHGFPATIVSDRDRVFISKFWTELFRLSGTKLSFSSAYHP 1187

Query: 428  QTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRLP 249
            QTDGQTEV NR LETYLRCFV+D PQ W   LH AEYWYNTS+HS+++M+PFEALYGR P
Sbjct: 1188 QTDGQTEVTNRTLETYLRCFVTDSPQNWFAYLHLAEYWYNTSYHSALKMSPFEALYGRAP 1247

Query: 248  PSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQWV 69
            P++  Y  GSS +A +D+TL ++Q  L++++  L +A+ RM+ QA+ HR +++F+VG WV
Sbjct: 1248 PNLRTYITGSSDVAAVDDTLAQRQQHLSLIRENLTYAQTRMRSQANTHRLDRSFQVGDWV 1307

Query: 68   YLKL*PYRQVSVHRRRSQKLA 6
            +LKL PYRQ +V  R S KL+
Sbjct: 1308 WLKLQPYRQSTVRGRASPKLS 1328


>gb|PNY06478.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1501

 Score =  343 bits (879), Expect = e-105
 Identities = 159/261 (60%), Positives = 203/261 (77%)
 Frame = -1

Query: 788  CQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFIA 609
            CQ +KYST+   G LQPL IPS VW DISMDFIT+LPPS G T+IWV++DRL+K+A+FI 
Sbjct: 1068 CQQSKYSTQKTPGLLQPLPIPSDVWRDISMDFITHLPPSKGKTVIWVIIDRLTKFAHFIG 1127

Query: 608  LPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYHP 429
            LPT  +AA +A IF T I +LHG P  IVSDRDR+F+S+FW  LF+L GT L FSSAYHP
Sbjct: 1128 LPTGFSAATIAPIFMTEIHRLHGFPATIVSDRDRVFISKFWTELFRLSGTKLSFSSAYHP 1187

Query: 428  QTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRLP 249
            QTDGQTEV NR LETYLRCFV+D PQ W   LH AEYWYNTS+HS+++M+PFEALYGR P
Sbjct: 1188 QTDGQTEVTNRTLETYLRCFVTDSPQNWFAYLHLAEYWYNTSYHSALKMSPFEALYGRAP 1247

Query: 248  PSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQWV 69
            P++  Y  GSS +A +D+TL ++Q  L++++  L +A+ RM+ QA+ HR +++F+VG WV
Sbjct: 1248 PNLRTYITGSSDVAAVDDTLAQRQQHLSLIRENLTYAQTRMRSQANTHRLDRSFQVGDWV 1307

Query: 68   YLKL*PYRQVSVHRRRSQKLA 6
            +LKL PYRQ +V  R S KL+
Sbjct: 1308 WLKLQPYRQSTVRGRASPKLS 1328


>gb|PKU60797.1| hypothetical protein MA16_Dca027791 [Dendrobium catenatum]
          Length = 426

 Score =  319 bits (818), Expect = e-104
 Identities = 152/264 (57%), Positives = 202/264 (76%)
 Frame = -1

Query: 794 QVCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYF 615
           +VCQ NKY    P G LQPL++P++VW+++SMDFI  LP S G T+I VVVDRLSKYA+F
Sbjct: 13  EVCQRNKYMAMTPGGLLQPLALPNKVWEEVSMDFIDGLPRSEGFTVILVVVDRLSKYAHF 72

Query: 614 IALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAY 435
           I L    TA  +AS F   + +LHG P+ IVSDRD++F+S FWR LF+LQGT LK S+AY
Sbjct: 73  IPLRHPYTAVTVASAFIREVIRLHGVPEAIVSDRDKVFLSHFWRELFRLQGTVLKRSTAY 132

Query: 434 HPQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGR 255
           HPQTDGQTEV+NR LETYLRCFVS+ P+ W++ L WAEYWYNTSFHS+ QMTPF+ LYGR
Sbjct: 133 HPQTDGQTEVVNRSLETYLRCFVSETPRLWAKWLSWAEYWYNTSFHSASQMTPFKVLYGR 192

Query: 254 LPPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQ 75
            PP ++ + + S+P+++++E L+++  +L  LK +L+ A+  MK+QAD HR++  FE G 
Sbjct: 193 DPPHLVHFGSSSTPVSSVEEYLEERDQVLEELKRQLLRAQQIMKKQADGHRRDIQFEAGD 252

Query: 74  WVYLKL*PYRQVSVHRRRSQKLAP 3
            V+LKL PYRQ +V  RR++KLAP
Sbjct: 253 KVFLKLRPYRQKTVANRRNEKLAP 276


>gb|PNX96526.1| transposon Tf2-1 polyprotein, partial [Trifolium pratense]
          Length = 1199

 Score =  337 bits (865), Expect = e-104
 Identities = 161/261 (61%), Positives = 200/261 (76%)
 Frame = -1

Query: 788  CQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFIA 609
            CQ NKY  +   G LQPL IP QVW+D+SMDFIT+LP S G+T+IWV+ DRL+K+ +FIA
Sbjct: 514  CQQNKYMPKKKQGLLQPLDIPKQVWEDLSMDFITHLPQSFGHTVIWVICDRLTKFVHFIA 573

Query: 608  LPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYHP 429
            LPT  TA  LAS F+  +C+LHG PK IVSDRD +F+S FW+ LF LQGTTLK+SSAYHP
Sbjct: 574  LPTKFTAPALASRFSVEVCRLHGIPKSIVSDRDPVFLSSFWKELFHLQGTTLKYSSAYHP 633

Query: 428  QTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRLP 249
            QTDGQTEV+NR LE YLRCF S+ P+QW + LH AE+W+NT+FHS+I+MTPFEALYGR P
Sbjct: 634  QTDGQTEVVNRSLEAYLRCFTSENPRQWYKYLHLAEFWHNTAFHSAIKMTPFEALYGRKP 693

Query: 248  PSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQWV 69
            PS+L Y +G + I  LD TLQ++QA+L+ LK  L  +R +M+ QA+K R +  F  G  V
Sbjct: 694  PSLLDYVSGQTNIRDLDTTLQQRQAILDTLKTNLQRSRQQMEIQANKSRTDCTFNCGDLV 753

Query: 68   YLKL*PYRQVSVHRRRSQKLA 6
             LKL PYRQ SV RR SQKL+
Sbjct: 754  LLKLQPYRQTSVQRRVSQKLS 774


>gb|OMO79377.1| reverse transcriptase [Corchorus capsularis]
          Length = 1380

 Score =  339 bits (870), Expect = e-104
 Identities = 164/262 (62%), Positives = 197/262 (75%)
 Frame = -1

Query: 791  VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
            +CQ  KY    P G   PL IPSQ+W DISMDFIT+LP S   T IWV+VDRLSKYA+FI
Sbjct: 965  ICQQVKYEATKPGGLSTPLPIPSQIWQDISMDFITHLPSSYDKTDIWVIVDRLSKYAHFI 1024

Query: 611  ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
            ALP S TA+ LA IF    CKLHG P  IVSDRD  F+S FW+ LFKLQGT L  SSAYH
Sbjct: 1025 ALPPSYTASSLAEIFCKDFCKLHGMPTSIVSDRDPKFLSAFWKELFKLQGTQLFHSSAYH 1084

Query: 431  PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
            PQ+DGQ+EVLNRCLETYLR F SD+P+QW++ LHWAEY YNTS HS+   TPFEA+YGR 
Sbjct: 1085 PQSDGQSEVLNRCLETYLRSFASDKPKQWTKFLHWAEYSYNTSKHSATGYTPFEAVYGRP 1144

Query: 251  PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
            PP++L Y  G++ +  LD +L ++Q LL+ LK  L  A+NRMK Q D++R EK F VG+W
Sbjct: 1145 PPTVLSYLPGTTKVVQLDASLLERQQLLSSLKTNLARAQNRMKMQYDQNRPEKQFNVGEW 1204

Query: 71   VYLKL*PYRQVSVHRRRSQKLA 6
            V+L+L PYRQ++VHRR SQKLA
Sbjct: 1205 VFLRLQPYRQMTVHRRSSQKLA 1226


>gb|PNX96205.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1314

 Score =  335 bits (860), Expect = e-103
 Identities = 158/261 (60%), Positives = 202/261 (77%)
 Frame = -1

Query: 788  CQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFIA 609
            CQ NKY      G LQPL IPSQVW D+SMDFIT+LP S G+T+IWV+ DRL+K+ +FI 
Sbjct: 782  CQQNKYLPTKKQGLLQPLDIPSQVWQDLSMDFITHLPQSFGHTVIWVIYDRLTKFVHFIT 841

Query: 608  LPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYHP 429
            LPT  +A  LAS F+  IC+LHG P+ IVSDRD LF+S FW+ LF++QGTTLK+S+ YHP
Sbjct: 842  LPTKFSAPDLASRFSVEICRLHGIPQSIVSDRDPLFLSAFWKELFRVQGTTLKYSTTYHP 901

Query: 428  QTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRLP 249
            +TDGQTEV+NR LE YLRCF +D P++W + LH AE+W+N++FHS+IQMTPFEALYGR P
Sbjct: 902  ETDGQTEVVNRSLEAYLRCFTNDNPRKWFKYLHLAEFWHNSTFHSAIQMTPFEALYGRQP 961

Query: 248  PSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQWV 69
            P+I+ Y AGS+ I  LD++LQK+Q LLN LK+ L  +R +M+ QA+K RK+  FE G  V
Sbjct: 962  PAIIDYVAGSAAITDLDDSLQKRQELLNTLKSNLKRSRQKMEDQANKSRKDCTFESGDLV 1021

Query: 68   YLKL*PYRQVSVHRRRSQKLA 6
             L+L PYRQ +V RR SQKL+
Sbjct: 1022 LLRLQPYRQSTVQRRVSQKLS 1042


>gb|PKU80732.1| hypothetical protein MA16_Dca027258 [Dendrobium catenatum]
          Length = 426

 Score =  314 bits (805), Expect = e-102
 Identities = 152/264 (57%), Positives = 199/264 (75%)
 Frame = -1

Query: 794 QVCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYF 615
           +VCQ +KY    P   LQPL++P +VW++ISMDFI  LP S G T+I VVVDRLSKYA+F
Sbjct: 13  EVCQRSKYLAISPGRLLQPLALPGRVWEEISMDFIDGLPRSDGFTVILVVVDRLSKYAHF 72

Query: 614 IALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAY 435
           I L    TA  +AS F   + +LHG P+ IVSDRD++F+S FWR LF+LQGT LK S+AY
Sbjct: 73  IPLQHPYTAVTVASAFIREVIRLHGVPEAIVSDRDKVFLSHFWRELFRLQGTVLKRSTAY 132

Query: 434 HPQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGR 255
           HPQTDGQTEV+NR LETYLRCFVS+ P+ W + L WAEYWYNTSFHS+ QMTPF+ LYG+
Sbjct: 133 HPQTDGQTEVVNRSLETYLRCFVSETPKLWEKWLSWAEYWYNTSFHSASQMTPFKVLYGQ 192

Query: 254 LPPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQ 75
            PP ++ + + S+P++++ E L+++  +L  LK  L+ A+  MK+QAD HRK+  FEVG+
Sbjct: 193 DPPHLVHFGSSSTPVSSVKEYLEERDRVLEELKRHLLRAQQIMKKQADGHRKDIQFEVGE 252

Query: 74  WVYLKL*PYRQVSVHRRRSQKLAP 3
            V+LKL PYRQ +V  RR++KLAP
Sbjct: 253 KVFLKLRPYRQKTVANRRNEKLAP 276


>gb|OMO81561.1| reverse transcriptase [Corchorus capsularis]
          Length = 1523

 Score =  335 bits (858), Expect = e-102
 Identities = 158/263 (60%), Positives = 198/263 (75%)
 Frame = -1

Query: 794  QVCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYF 615
            + CQ  K       G LQPL IP+ +W DI+MDFIT+LP S G T IWV+VDRLSKYA+F
Sbjct: 1095 RTCQEVKCLPTKQAGLLQPLPIPTHIWQDIAMDFITHLPFSNGKTTIWVIVDRLSKYAHF 1154

Query: 614  IALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAY 435
            +A+P   TA +LA++F+  I KLHG P+ IVSDRD +F+S FW+ LF+LQGT L  SSAY
Sbjct: 1155 LAIPAHTTAPQLAALFSQEIGKLHGLPRSIVSDRDPIFISSFWKELFRLQGTKLNHSSAY 1214

Query: 434  HPQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGR 255
            HPQ+DGQ+EVLNRCLETYLRCF  D P+ WS++ HWAE+ YNT+ HS+I MTPFEA+YG 
Sbjct: 1215 HPQSDGQSEVLNRCLETYLRCFAGDNPRSWSKIFHWAEWSYNTALHSAINMTPFEAVYGY 1274

Query: 254  LPPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQ 75
             PP++  Y  G S IA LD+ L ++Q LL  LK  L  A+NRMK QAD+HRKEK+FE G+
Sbjct: 1275 APPTVASYLPGPSKIAQLDDCLVERQTLLARLKVNLARAQNRMKMQADRHRKEKHFEEGE 1334

Query: 74   WVYLKL*PYRQVSVHRRRSQKLA 6
            WV++KL PYRQ SV +R +QKLA
Sbjct: 1335 WVWVKLQPYRQQSVVKRTTQKLA 1357


>gb|OMO73136.1| reverse transcriptase [Corchorus capsularis]
          Length = 900

 Score =  325 bits (834), Expect = e-102
 Identities = 157/257 (61%), Positives = 194/257 (75%)
 Frame = -1

Query: 776  KYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFIALPTS 597
            KY T  P G   PL IP+Q+W DI+MDFIT LP S G T IWV+VDRL+KYA+FIALP+S
Sbjct: 558  KYETTRPGGLSTPLPIPTQIWPDIAMDFITNLPASHGKTDIWVIVDRLTKYAHFIALPSS 617

Query: 596  NTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYHPQTDG 417
             TA++LA IF   +CKLHG P  IVSDRD  FMS FW  LFKLQGT L  SSAYHPQ+DG
Sbjct: 618  YTASQLAEIFCKDVCKLHGMPASIVSDRDPKFMSNFWSELFKLQGTKLLHSSAYHPQSDG 677

Query: 416  QTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRLPPSIL 237
            Q+EVLNRCL+TYLRCF S++P+ W++ LHWAEY YNTSFH++  +TPFE +YGR P ++L
Sbjct: 678  QSEVLNRCLQTYLRCFASEKPRLWTKFLHWAEYSYNTSFHTAAGLTPFEDVYGRSPLTVL 737

Query: 236  PYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQWVYLKL 57
             Y  G++ +A L+E+L ++Q +L +LK  L  A+NRMK Q D HR EK FEVG  V L+L
Sbjct: 738  SYLPGATKVAKLEESLVERQQILTLLKNNLERAQNRMKMQHDHHRTEKQFEVGDLVLLRL 797

Query: 56   *PYRQVSVHRRRSQKLA 6
             PYRQ+ V +R SQKLA
Sbjct: 798  QPYRQIFVSKRSSQKLA 814


>gb|PKU84571.1| hypothetical protein MA16_Dca017958 [Dendrobium catenatum]
          Length = 444

 Score =  310 bits (793), Expect = e-100
 Identities = 149/264 (56%), Positives = 198/264 (75%)
 Frame = -1

Query: 794 QVCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYF 615
           +V Q +KY T  P G LQPL++P +VWD+ISMD+I  LP S G T+I VV+DRLSKY +F
Sbjct: 13  EVFQRSKYLTMSPGGLLQPLALPGRVWDEISMDYIDGLPRSDGFTVILVVIDRLSKYVHF 72

Query: 614 IALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAY 435
           I L    TA  +AS F   + +LHG P+ IVSDRD++F+S FWR LF+LQGT LK S++Y
Sbjct: 73  IPLRHPYTAVTVASAFIREVVRLHGVPEAIVSDRDKVFLSHFWRQLFRLQGTVLKRSTSY 132

Query: 434 HPQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGR 255
           HPQTDGQTEV+NR LETYLRCFVSD P+ W++ L WAEYWYNTSFHS+ QMT F+ LYGR
Sbjct: 133 HPQTDGQTEVINRSLETYLRCFVSDTPKLWAKWLSWAEYWYNTSFHSASQMTSFKVLYGR 192

Query: 254 LPPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQ 75
            PP ++ + + S+P+++++  L+++  +L  LK  L+ A+  MK+QAD HRK+  FE G+
Sbjct: 193 DPPHLVHFGSSSTPVSSVEVYLEERDRVLEELKRHLLRAQQIMKKQADGHRKDIQFEAGE 252

Query: 74  WVYLKL*PYRQVSVHRRRSQKLAP 3
            V+LKL PYRQ +V  RR++KLAP
Sbjct: 253 NVFLKLRPYRQKTVANRRNEKLAP 276


>gb|OMO55704.1| reverse transcriptase [Corchorus capsularis]
          Length = 2083

 Score =  330 bits (845), Expect = e-100
 Identities = 166/263 (63%), Positives = 195/263 (74%)
 Frame = -1

Query: 794  QVCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYF 615
            +VCQ  KY T  P G L+PL IPSQ W DI+MDFIT+LP S G   IWV+VDR SKYA+F
Sbjct: 1102 KVCQEVKYLTSKPQGLLEPLPIPSQAWQDIAMDFITHLPISHGKVTIWVIVDRFSKYAHF 1161

Query: 614  IALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAY 435
            +ALP   TA  LA+IFA  I KLHG P+ IVSDRD LF+S+FW  LFKLQGT L  SSAY
Sbjct: 1162 LALPAGVTAPHLAAIFAQEIVKLHGIPRSIVSDRDPLFVSKFWNELFKLQGTQLPMSSAY 1221

Query: 434  HPQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGR 255
            HPQTDGQ+EVLNRCLETYLR FVS+ P+QW+++LHWAE+ YN+SFHS+  MTPF+ALYG 
Sbjct: 1222 HPQTDGQSEVLNRCLETYLRAFVSENPKQWTRILHWAEWSYNSSFHSAACMTPFQALYGF 1281

Query: 254  LPPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQ 75
             PPSI  Y  GS+ +A LD++L  +Q LL  LKA L  A NRMK QAD+ R EK F  G 
Sbjct: 1282 PPPSIPSYLPGSTTVAQLDDSLIDRQQLLKQLKANLARASNRMKIQADRKRVEKQFTEGD 1341

Query: 74   WVYLKL*PYRQVSVHRRRSQKLA 6
             V +KL PYRQ SV  R SQKL+
Sbjct: 1342 LVLVKLQPYRQQSVVSRTSQKLS 1364


>gb|PNX92586.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1585

 Score =  328 bits (842), Expect = e-100
 Identities = 152/262 (58%), Positives = 202/262 (77%)
 Frame = -1

Query: 791  VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
            VCQ NKY      G LQPL IP +VW++I+MDFIT+LP S G+T+IWV+ DRL+KY +FI
Sbjct: 1033 VCQQNKYMPTKKQGLLQPLEIPERVWEEITMDFITHLPNSFGHTVIWVICDRLTKYVHFI 1092

Query: 611  ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
             LP+  TA  +A  F+T IC+LHG PK I+SDRD LF+S FW+ LF+ QGTTLK+SSAYH
Sbjct: 1093 GLPSRFTAKDIAMRFSTEICRLHGLPKSIISDRDPLFLSNFWKELFRAQGTTLKYSSAYH 1152

Query: 431  PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
            P+TDGQTEV+NR LETYLRCF S+ P++W + LH AEYW+N+SFHS+I+M+PFEALYGR 
Sbjct: 1153 PETDGQTEVVNRSLETYLRCFTSEHPRKWFKFLHMAEYWHNSSFHSAIKMSPFEALYGRS 1212

Query: 251  PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
            PPS+L Y  GSS  + +++TL ++Q ++ +LK  L  +R +M+ QA+K R++  F+ G  
Sbjct: 1213 PPSVLDYIQGSSSNSDIEQTLAERQKIITMLKENLKRSRQKMEAQANKKRRDCTFKPGDL 1272

Query: 71   VYLKL*PYRQVSVHRRRSQKLA 6
            V L+L PYRQ +VHRR SQKL+
Sbjct: 1273 VLLRLQPYRQQTVHRRTSQKLS 1294


>gb|OMO55084.1| reverse transcriptase [Corchorus capsularis]
          Length = 1254

 Score =  326 bits (835), Expect = e-100
 Identities = 159/263 (60%), Positives = 196/263 (74%)
 Frame = -1

Query: 794  QVCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYF 615
            +VCQ  KY T  P G L PL IPSQVW D++MDFIT LP S G + IWV+VDRLSKYA+F
Sbjct: 839  KVCQEVKYLTSKPQGLLAPLPIPSQVWRDLAMDFITNLPLSHGKSTIWVIVDRLSKYAHF 898

Query: 614  IALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAY 435
            +ALP + TA  LAS++A  + KLHG PK +V DRD LFMS FW+ L KLQGT L+ SSAY
Sbjct: 899  VALPGNVTAPTLASVYAQEVGKLHGMPKNVVCDRDPLFMSNFWQELHKLQGTQLRMSSAY 958

Query: 434  HPQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGR 255
            HPQTDGQ+EVLNRCLETYLR F S++P+ W ++LHWAE+ YNT++HS+  MTPF+ALYG 
Sbjct: 959  HPQTDGQSEVLNRCLETYLRSFTSEQPKNWVKILHWAEWSYNTAYHSAASMTPFQALYGH 1018

Query: 254  LPPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQ 75
             PP+I  Y AG++  A LD +L ++Q LL  LKA L  A NRM  QAD+ R+E+ F  G 
Sbjct: 1019 PPPTIPSYVAGTTTNAQLDNSLIERQQLLKQLKANLARAHNRMVMQADRKRQERQFAEGD 1078

Query: 74   WVYLKL*PYRQVSVHRRRSQKLA 6
            WV +KL PYRQ SV +R +QKLA
Sbjct: 1079 WVLVKLQPYRQQSVVQRSNQKLA 1101


>gb|PNX89250.1| retrotransposon Ty-3/Gypsy protein, partial [Trifolium pratense]
          Length = 447

 Score =  307 bits (787), Expect = 1e-99
 Identities = 153/263 (58%), Positives = 184/263 (69%)
 Frame = -1

Query: 791 VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
           VCQ NKY+T  P G LQPL IP+QVW DISMDFIT LP S G   I+VVVDRLSKYA+FI
Sbjct: 55  VCQCNKYATSTPGGLLQPLPIPNQVWADISMDFITGLPKSKGFEAIFVVVDRLSKYAHFI 114

Query: 611 ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
            L    +A  LA  F   + +LHG P+ IVSDRD +F+S FW+ LFK QGT LKFS+AYH
Sbjct: 115 LLKRPYSARSLAETFTKEVVRLHGIPESIVSDRDPIFVSNFWQELFKQQGTFLKFSTAYH 174

Query: 431 PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
           PQTDGQTEV+NRCLET+LRCF+ D+P+ W+  L WAEYWYNT+FH+S   TPFE +YGR 
Sbjct: 175 PQTDGQTEVVNRCLETFLRCFIVDQPKTWAMWLPWAEYWYNTTFHASTGTTPFEVVYGRS 234

Query: 251 PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
           PP I  Y  G   +  +   L  +   L  LK  L  A +RMK QAD+HRKE++FEVG  
Sbjct: 235 PPVITNYLPGEVKVEAVQRDLADRDECLRQLKHHLSRASDRMKTQADRHRKERSFEVGDL 294

Query: 71  VYLKL*PYRQVSVHRRRSQKLAP 3
           V+LKL P+ Q SV  R   KL+P
Sbjct: 295 VFLKLRPHVQQSVAARICPKLSP 317


>gb|PRQ35711.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 619

 Score =  311 bits (797), Expect = 4e-99
 Identities = 146/262 (55%), Positives = 187/262 (71%)
 Frame = -1

Query: 788  CQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFIA 609
            CQ   Y T  P G LQPL IP  +W DISMDF+  LPPS G   I+VVVDRLSKY +FIA
Sbjct: 247  CQRQTYETIKPPGLLQPLPIPENIWFDISMDFVDGLPPSDGKNAIFVVVDRLSKYGHFIA 306

Query: 608  LPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYHP 429
            +    +A ++A +F   + +LHG PK IVSDRD +F+S FW   FKLQGTTL  SSAYHP
Sbjct: 307  ISHPYSATQIAEVFMKEVFRLHGMPKSIVSDRDPIFISHFWTAFFKLQGTTLCRSSAYHP 366

Query: 428  QTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRLP 249
            QTDGQTEV+NR LE YLRCFV D+P  W  +LHWAE+WYN+++HS+I+MTPF+A+YG  P
Sbjct: 367  QTDGQTEVVNRSLEHYLRCFVLDKPSSWPTLLHWAEWWYNSTYHSTIRMTPFQAVYGIPP 426

Query: 248  PSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQWV 69
            PS+  Y  GS+ +  +D+ LQ +  L+  LK  +   +NRMKQ AD+HR E+ F +G+WV
Sbjct: 427  PSVAMYVPGSTSVQKVDKALQDRNVLVQSLKIHMAATQNRMKQSADQHRTERVFNIGEWV 486

Query: 68   YLKL*PYRQVSVHRRRSQKLAP 3
            +LKL PYRQ S+ +R   KL+P
Sbjct: 487  FLKLHPYRQQSLVKRAVHKLSP 508


>gb|PNY13776.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1888

 Score =  327 bits (838), Expect = 5e-99
 Identities = 152/262 (58%), Positives = 201/262 (76%)
 Frame = -1

Query: 791  VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
            VCQ NKY      G LQPL IP +VW++I+MDFIT+LP S G+T++WV+ DRL+KY +F+
Sbjct: 1337 VCQQNKYMPTKKQGLLQPLDIPEKVWEEITMDFITHLPNSFGHTVVWVICDRLTKYVHFV 1396

Query: 611  ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
             LP+  TA  +A  F+T IC+LHG PK IVSDRD LF+S FW+ LF+ QGTTLK+SSAYH
Sbjct: 1397 GLPSRFTAKDIAMRFSTEICRLHGLPKSIVSDRDPLFLSNFWKELFRAQGTTLKYSSAYH 1456

Query: 431  PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
            P+TDGQTEV+NR LETYLRCF S++P++W + LH AEYW+N++FHS+I+M+PFEALYGR 
Sbjct: 1457 PETDGQTEVVNRSLETYLRCFTSEQPRKWYKFLHLAEYWHNSAFHSAIKMSPFEALYGRS 1516

Query: 251  PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
            PPSIL Y  GSS  + +++TL ++Q ++  LK  L  +R +M+ QA+K R++  FE G  
Sbjct: 1517 PPSILDYVQGSSSNSDIEQTLAERQKIITTLKENLKRSRQKMEAQANKKRRDCTFEPGDL 1576

Query: 71   VYLKL*PYRQVSVHRRRSQKLA 6
            V L+L  YRQ +VHRR SQKLA
Sbjct: 1577 VLLRLQAYRQQTVHRRTSQKLA 1598


>gb|PNY18032.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1516

 Score =  324 bits (831), Expect = 2e-98
 Identities = 152/262 (58%), Positives = 198/262 (75%)
 Frame = -1

Query: 791  VCQANKYSTEPPYGTLQPLSIPSQVWDDISMDFITYLPPSGGNTIIWVVVDRLSKYAYFI 612
            VCQ NKY      G LQPL IP++VW++I+MDFIT+LP S G+T++WV+ DRL+KY +FI
Sbjct: 929  VCQQNKYMPTKKQGLLQPLDIPAKVWEEITMDFITHLPNSFGHTVVWVICDRLTKYVHFI 988

Query: 611  ALPTSNTAAKLASIFATHICKLHGNPKVIVSDRDRLFMSEFWRHLFKLQGTTLKFSSAYH 432
             LP   TA  +A  F+T IC+LHG P  IVSDRD +F+S FW+ LF++QGTTLK+SSAYH
Sbjct: 989  GLPARFTAKDIAVRFSTEICRLHGIPLSIVSDRDPIFLSNFWKELFRVQGTTLKYSSAYH 1048

Query: 431  PQTDGQTEVLNRCLETYLRCFVSDEPQQWSQVLHWAEYWYNTSFHSSIQMTPFEALYGRL 252
            P+TDGQTEV+NR LETYLRCF S+ P++W + LH AEYWYN+SFHS+I+M+PFEALYGR 
Sbjct: 1049 PETDGQTEVVNRSLETYLRCFASEHPRKWYKFLHLAEYWYNSSFHSAIKMSPFEALYGRN 1108

Query: 251  PPSILPYTAGSSPIATLDETLQKKQALLNILKARLVHARNRMKQQADKHRKEKNFEVGQW 72
            PPSIL Y  G S  + +D+TL ++Q ++N LK  L  +R +M+ QA+K R+   FE G  
Sbjct: 1109 PPSILDYVTGRSTNSDIDQTLAERQQIINTLKENLKRSRQKMEDQANKKRRNCTFEPGDL 1168

Query: 71   VYLKL*PYRQVSVHRRRSQKLA 6
            V L+L PYRQ +V  R SQKL+
Sbjct: 1169 VLLRLQPYRQQTVQHRVSQKLS 1190