BLASTX nr result

ID: Chrysanthemum21_contig00039131 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00039131
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93988.1| Protein of unknown function DUF761, plant [Cynara...    89   1e-17

>gb|KVH93988.1| Protein of unknown function DUF761, plant [Cynara cardunculus var.
           scolymus]
          Length = 647

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 62/148 (41%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   HRPRHKHKKLERKVSDATKEIATAISNISSLYYNXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           HR  HKHKKLERKVSDATKEIATAIS++    YN                          
Sbjct: 322 HRSHHKHKKLERKVSDATKEIATAISSL----YNQRKRKNKRKLRNISGSSGSSPPSLHS 377

Query: 182 XXXXLIELTDVEEPRHSFIXXXXXXXXXXXXXXXFKFQNLFKKGAKHKKIHSVSPTIY-X 358
                +   DV+E + SF                  FQNLFKKG KHK+IHSV  TI   
Sbjct: 378 -----VRSPDVQEQQQSFTPPPPPPPPPPPPPPPSMFQNLFKKGGKHKRIHSVPATISPG 432

Query: 359 XXXXXXXXXXNSIFNNIFK-GNKSKRFN 439
                     +SIFNN+FK GNKSKRF+
Sbjct: 433 VPPLPPPPPPSSIFNNLFKSGNKSKRFH 460


Top