BLASTX nr result

ID: Chrysanthemum21_contig00038875 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038875
         (587 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY81132.1| hypothetical protein LSAT_9X57361 [Lactuca sativa]      94   5e-21
gb|PLY88313.1| hypothetical protein LSAT_3X66460 [Lactuca sativa]      52   8e-09

>gb|PLY81132.1| hypothetical protein LSAT_9X57361 [Lactuca sativa]
          Length = 154

 Score = 94.4 bits (233), Expect = 5e-21
 Identities = 53/97 (54%), Positives = 62/97 (63%)
 Frame = +2

Query: 173 LPNELNPKPPVLTDPYCSLFTHLRRSPLITNKLLKDCKTCQQHPC*NTVSTKICSEILSH 352
           + NELNPKPP LTDP C LFTHLRR PLITNK +K+  +   +P       K+    L H
Sbjct: 1   MSNELNPKPPALTDPSCPLFTHLRRYPLITNKPIKNLFSFFDNP----DLIKLVPRALFH 56

Query: 353 RSRRQGHTRLYRLPSSAKRTKSKPHAFPDSSCSYIPQ 463
           R+ RQGH  LYRLPS AKRT SK  A   SS S+ P+
Sbjct: 57  RTTRQGHNHLYRLPSPAKRTDSKSPAL-TSSRSFTPR 92


>gb|PLY88313.1| hypothetical protein LSAT_3X66460 [Lactuca sativa]
          Length = 113

 Score = 52.0 bits (123), Expect(2) = 8e-09
 Identities = 26/35 (74%), Positives = 26/35 (74%)
 Frame = +1

Query: 178 KRTESKATCLDGSLLFAFHAPTPVSPYHEQAAQGL 282
           KRTESKATC D S L AFHAPT VS YHEQ  Q L
Sbjct: 60  KRTESKATCFDESFLPAFHAPTSVSLYHEQTDQEL 94



 Score = 35.8 bits (81), Expect(2) = 8e-09
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +2

Query: 2   PKPPDLNSNSHNVYNLIVSPISSCLDSHNLY*SPLFKEASPPTKENKVTPPSIVFFH 172
           PKP DLN      + +I+       +S  L+  P FKEA+PPTK+ K+      F H
Sbjct: 8   PKPSDLN------FTVIMFTPCCFFNSLPLFRLPFFKEATPPTKKTKLPASPFSFNH 58


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