BLASTX nr result

ID: Chrysanthemum21_contig00038780 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038780
         (468 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10448.1| Regulatory protein RecX [Cynara cardunculus var. ...    95   4e-20
ref|XP_023728359.1| uncharacterized protein LOC111876065 isoform...    74   1e-12
ref|XP_023728357.1| uncharacterized protein LOC111876065 isoform...    74   2e-12
ref|XP_023728356.1| uncharacterized protein LOC111876065 isoform...    74   2e-12

>gb|KVI10448.1| Regulatory protein RecX [Cynara cardunculus var. scolymus]
          Length = 352

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 12/109 (11%)
 Frame = +1

Query: 1   CSNSREKSEDFPVRYIPKRASKLK--NDSAVTPKE-DKLEVND---------DLSNDKGK 144
           CSN  E+S+DFPVRY PK++SK    +DS  +PK+ +  EV           ++SN + +
Sbjct: 35  CSNFGERSKDFPVRYTPKKSSKFNKLDDSTRSPKDSENYEVRRFTNPDSSSVEISNAEER 94

Query: 145 SRIGLFSDDKLVDYDFNSGNPRPKEKNIRKKNVRAEMGEHDYEWRSAES 291
           SRIG   D+K  DYDF SG  + KEK IR   VR+E+GEHDY+WR  ES
Sbjct: 95  SRIGSILDEKSPDYDFRSGKLKSKEKKIRNSAVRSEVGEHDYKWRFPES 143


>ref|XP_023728359.1| uncharacterized protein LOC111876065 isoform X3 [Lactuca sativa]
          Length = 270

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
 Frame = +1

Query: 1   CSNSREKSEDFPVRYIPKRASKLKNDSAVTP--KEDK-LEVND---------DLSNDKGK 144
           CSNS E S + PVRY PK++ K    +  TP  KE K  EV           + SN   +
Sbjct: 35  CSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFSNAGER 94

Query: 145 SRIGLFSDDKLVDYDFNSGNPRPKEKNIRKKNVRAEMGEHDYEWRSAESK 294
           S IG    +K +D DF  G+   KEK     NVR E+GE DY+WRSA+SK
Sbjct: 95  SSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSK 144


>ref|XP_023728357.1| uncharacterized protein LOC111876065 isoform X2 [Lactuca sativa]
          Length = 349

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
 Frame = +1

Query: 1   CSNSREKSEDFPVRYIPKRASKLKNDSAVTP--KEDK-LEVND---------DLSNDKGK 144
           CSNS E S + PVRY PK++ K    +  TP  KE K  EV           + SN   +
Sbjct: 34  CSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFSNAGER 93

Query: 145 SRIGLFSDDKLVDYDFNSGNPRPKEKNIRKKNVRAEMGEHDYEWRSAESK 294
           S IG    +K +D DF  G+   KEK     NVR E+GE DY+WRSA+SK
Sbjct: 94  SSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSK 143


>ref|XP_023728356.1| uncharacterized protein LOC111876065 isoform X1 [Lactuca sativa]
 gb|PLY78037.1| hypothetical protein LSAT_7X114860 [Lactuca sativa]
          Length = 350

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
 Frame = +1

Query: 1   CSNSREKSEDFPVRYIPKRASKLKNDSAVTP--KEDK-LEVND---------DLSNDKGK 144
           CSNS E S + PVRY PK++ K    +  TP  KE K  EV           + SN   +
Sbjct: 35  CSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFSNAGER 94

Query: 145 SRIGLFSDDKLVDYDFNSGNPRPKEKNIRKKNVRAEMGEHDYEWRSAESK 294
           S IG    +K +D DF  G+   KEK     NVR E+GE DY+WRSA+SK
Sbjct: 95  SSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSK 144


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