BLASTX nr result

ID: Chrysanthemum21_contig00038747 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038747
         (867 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG08547.1| putative retrotransposon Orf1 [Helianthus annuus]       79   8e-13
ref|XP_021994062.1| uncharacterized protein LOC110890743 [Helian...    79   1e-12
ref|XP_021991776.1| mediator of RNA polymerase II transcription ...    69   2e-09
gb|PLY98440.1| hypothetical protein LSAT_1X7101 [Lactuca sativa]       62   4e-07

>gb|OTG08547.1| putative retrotransposon Orf1 [Helianthus annuus]
          Length = 365

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 71/250 (28%), Positives = 109/250 (43%)
 Frame = +1

Query: 4   DRLEMIHRREDGEILFRFHVWRNVFSVLGSLIRELMLKCFSTVHSRKTDVDIWIVDTLKF 183
           + L + HR  D        VW   FS+     REL L+  ST   +    D     ++ F
Sbjct: 12  ETLHLHHRARDA----MGPVWLRFFSIKHPQYRELCLEFLSTYEFQTPCTDYSYSRSITF 67

Query: 184 RLGGVTHRMSMRDFILALGLHTEEELGSDGFCGILDRRFIRGSR*SRAW*VLGEDFIWWG 363
           R+ GV    S+ +F   +GL+T+EE+ +D F   L +     S   + W  +GE      
Sbjct: 68  RMAGVERSCSLIEFAKRMGLYTDEEMETDVFLKGLTKLPDDVSP-EQVWAQIGEGLYQAN 126

Query: 364 LHYFIPIIHTYHGVDEAAVSRAIA*TTTGRS*SSEKVTTIELFFLRSMDEEAVLNIPHFL 543
                 +   +H +    + R IA +  GR  S+  VT  +LFFL    + AV N+ + L
Sbjct: 127 TVKSTRLKDPFHRI----LHRVIAQSIAGRKESTGVVTQRDLFFLYCFVKPAVCNVAYVL 182

Query: 544 AHYQHRVASGRQPRSQMTGGHFISRLAVFFGVIADVILAGVDVELMELPRIDPDYLERRL 723
           A Y      G+ P S + GG FI++LA  +GV+   + A +    +    ID   L    
Sbjct: 183 ASY-FTCCMGKMPTSHICGGSFITQLAESYGVLTSEVCATL-TSFLPTQTIDMVVLTNMK 240

Query: 724 RVCEMVMGGY 753
            V +   GGY
Sbjct: 241 AVGQTEGGGY 250


>ref|XP_021994062.1| uncharacterized protein LOC110890743 [Helianthus annuus]
          Length = 432

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 71/250 (28%), Positives = 109/250 (43%)
 Frame = +1

Query: 4   DRLEMIHRREDGEILFRFHVWRNVFSVLGSLIRELMLKCFSTVHSRKTDVDIWIVDTLKF 183
           + L + HR  D        VW   FS+     REL L+  ST   +    D     ++ F
Sbjct: 79  ETLHLHHRARDA----MGPVWLRFFSIKHPQYRELCLEFLSTYEFQTPCTDYSYSRSITF 134

Query: 184 RLGGVTHRMSMRDFILALGLHTEEELGSDGFCGILDRRFIRGSR*SRAW*VLGEDFIWWG 363
           R+ GV    S+ +F   +GL+T+EE+ +D F   L +     S   + W  +GE      
Sbjct: 135 RMAGVERSCSLIEFAKRMGLYTDEEMETDVFLKGLTKLPDDVSP-EQVWAQIGEGLYQAN 193

Query: 364 LHYFIPIIHTYHGVDEAAVSRAIA*TTTGRS*SSEKVTTIELFFLRSMDEEAVLNIPHFL 543
                 +   +H +    + R IA +  GR  S+  VT  +LFFL    + AV N+ + L
Sbjct: 194 TVKSTRLKDPFHRI----LHRVIAQSIAGRKESTGVVTQRDLFFLYCFVKPAVCNVAYVL 249

Query: 544 AHYQHRVASGRQPRSQMTGGHFISRLAVFFGVIADVILAGVDVELMELPRIDPDYLERRL 723
           A Y      G+ P S + GG FI++LA  +GV+   + A +    +    ID   L    
Sbjct: 250 ASY-FTCCMGKMPTSHICGGSFITQLAESYGVLTSEVCATL-TSFLPTQTIDMVVLTNMK 307

Query: 724 RVCEMVMGGY 753
            V +   GGY
Sbjct: 308 AVGQTEGGGY 317


>ref|XP_021991776.1| mediator of RNA polymerase II transcription subunit 12-like
           [Helianthus annuus]
          Length = 431

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
 Frame = +1

Query: 61  VWRNVFSVLGSLIRELMLKCFSTVHSRKTDVDIWIVDTLKFRLGGVTHRMSMRDFILALG 240
           VW   FS+     REL L+  ST   +    D     ++ FR+ GV    S+ +F   +G
Sbjct: 4   VWLRFFSIKHPQYRELCLEFLSTYEFQTPCTDYSYGRSITFRMAGVERSCSLIEFAKRMG 63

Query: 241 LHTEEELGSDGFC-GILDRRFIRGSR*SRAW*VLGEDFIWWGLHYFIPIIHT-----YHG 402
           L+T++E+ +D F  G++  +        + W  +GE     G +   P+I+T     +H 
Sbjct: 64  LYTDKEMKTDVFLKGLI--KLPDAVTPEQVWAQIGE-----GPYQAKPLIYTRLKDPFHR 116

Query: 403 VDEAAVSRAIA*TTTGRS*SSEKVTTIELFFLRSMDEEAVLNIPHFLAHYQHRVASGRQP 582
           +    + R IA +  GR      +   +LFFL  + + AV N+ + LA Y      G +P
Sbjct: 117 I----LHRVIALSIAGRKCGPNVIFQKDLFFLYCLIKPAVCNVAYMLASY-FTSCMGMRP 171

Query: 583 RSQMTGGHFISRLAVFFGVI 642
            + + GG +I++LA  +GV+
Sbjct: 172 TTYICGGSYITQLAKSYGVL 191


>gb|PLY98440.1| hypothetical protein LSAT_1X7101 [Lactuca sativa]
          Length = 346

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
 Frame = +1

Query: 64  WRNVFSVLGSLIRELMLKCFSTVHSRKTDVDIWIVDTLKFRLGGVTHRMSMRDFILALGL 243
           W  VF +   +  EL L+ FSTV S    VD +   +  F LGG  H+ SM D    LG+
Sbjct: 6   WSRVFRIQEPVYLELCLEFFSTV-SFTGGVDAYHPSSFSFCLGGEFHQCSMVDLACRLGV 64

Query: 244 HTEEELGSDGFCGILDRR---FIRGSR*SRAW*VLGEDFIWWGLHYFIPIIHTYHGVDEA 414
           + +  + +  F   L +    F  G   +  W  +G          +IP       +   
Sbjct: 65  YDQPLVSTPIFRAFLAQTHMVFPEGVTSTGWWNTIGNKV-------YIPKSAQEGSIRSP 117

Query: 415 A---VSRAIA*TTTGRS*SSEKVTTIELFFLRSMDEEAVL-NIPHFLAHYQHRVASGRQP 582
               + R I+ T   R    +KV+ +++F+L S+    V  NIP  LA Y    A   + 
Sbjct: 118 THRLIHRLISSTINQRK-DDDKVSNLDVFYLWSIITPGVFCNIPWCLASYLSEGAVKDRK 176

Query: 583 RSQMTGGHFISRLAVFFGVIADVILAGVDVELMELPRIDPDYLERRLRVCEMVMGGYY 756
            S++ GG F++RLA  FG++     A   + ++  P  +P  L RR R+ E   GG+Y
Sbjct: 177 TSRINGGMFVTRLANSFGLMNRG--AWNFMTMIPTPPFNP-ILFRRARIIEDYGGGHY 231


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