BLASTX nr result

ID: Chrysanthemum21_contig00038703 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038703
         (495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY97294.1| hypothetical protein LSAT_3X106860 [Lactuca sativa]     68   2e-10
ref|XP_023730411.1| putative F-box/LRR-repeat protein At3g28410 ...    64   6e-09
ref|XP_023730410.1| putative F-box/LRR-repeat protein At3g28410 ...    64   6e-09

>gb|PLY97294.1| hypothetical protein LSAT_3X106860 [Lactuca sativa]
          Length = 336

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
 Frame = -2

Query: 446 EDSLVPSNIDVDDLKTR--FSSHVTDLQLSLAASSDARVWEHSRFFDACFSICRPSYIKS 273
           E S++P +ID+DDLKTR  F       QLS     D  +WE S FFDA F IC P ++ +
Sbjct: 203 EKSMLPLDIDIDDLKTRLRFPPATNVQQLSFGTIGDECLWERSPFFDAFFEICHPKHVFA 262

Query: 272 SKPA------------VKKMIEGKTV------DLKDVHLKNPLNGNWEALTCSWNSXXXX 147
              A            +++++E KT        LK V +K PL+  W+ LT S  S    
Sbjct: 263 KPDAWLRQNNHFCRIMLREVLEKKTTTAKWPHHLKHVQIKQPLHKIWKTLTNSKKSFLDG 322

Query: 146 XXXXXXLECKLNW 108
                 L+ KL W
Sbjct: 323 STPGVWLQFKLQW 335


>ref|XP_023730411.1| putative F-box/LRR-repeat protein At3g28410 isoform X2 [Lactuca
           sativa]
 ref|XP_023730413.1| putative F-box/LRR-repeat protein At3g28410 isoform X2 [Lactuca
           sativa]
 gb|PLY76493.1| hypothetical protein LSAT_9X121120 [Lactuca sativa]
          Length = 527

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 23/148 (15%)
 Frame = -2

Query: 482 INIIHYNDNELQEDSLVPSNIDVDDLKTR--FSSHVTDLQLSLAASSDARVWEHSRFFDA 309
           +++ H  D ++Q +S +  NID+DDL+TR  F       +L    + D  +WE S FFDA
Sbjct: 379 LSLSHKCDLDIQFNSPLDVNIDIDDLRTRLMFPPATNVQELRFQTTEDECMWEQSPFFDA 438

Query: 308 CFSICRPSYIKSS------------KPAVKKMIEGKTVD---------LKDVHLKNPLNG 192
            F IC P  + +             +  +++++E KT           LK V +K PL+ 
Sbjct: 439 FFEICHPKCVYAKPDDHFNHNNHFCRLMLREVLEKKTTTTGIVYWPHYLKHVQIKQPLDQ 498

Query: 191 NWEALTCSWNSXXXXXXXXXXLECKLNW 108
            WE LT S  S          L   LNW
Sbjct: 499 KWETLTNSHRSFLDGSTPDVYLYFNLNW 526


>ref|XP_023730410.1| putative F-box/LRR-repeat protein At3g28410 isoform X1 [Lactuca
           sativa]
          Length = 552

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 23/148 (15%)
 Frame = -2

Query: 482 INIIHYNDNELQEDSLVPSNIDVDDLKTR--FSSHVTDLQLSLAASSDARVWEHSRFFDA 309
           +++ H  D ++Q +S +  NID+DDL+TR  F       +L    + D  +WE S FFDA
Sbjct: 404 LSLSHKCDLDIQFNSPLDVNIDIDDLRTRLMFPPATNVQELRFQTTEDECMWEQSPFFDA 463

Query: 308 CFSICRPSYIKSS------------KPAVKKMIEGKTVD---------LKDVHLKNPLNG 192
            F IC P  + +             +  +++++E KT           LK V +K PL+ 
Sbjct: 464 FFEICHPKCVYAKPDDHFNHNNHFCRLMLREVLEKKTTTTGIVYWPHYLKHVQIKQPLDQ 523

Query: 191 NWEALTCSWNSXXXXXXXXXXLECKLNW 108
            WE LT S  S          L   LNW
Sbjct: 524 KWETLTNSHRSFLDGSTPDVYLYFNLNW 551


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