BLASTX nr result

ID: Chrysanthemum21_contig00038570 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038570
         (685 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY86668.1| hypothetical protein LSAT_4X159841 [Lactuca sativa]    144   4e-40
gb|PLY92360.1| hypothetical protein LSAT_3X86260 [Lactuca sativa]      74   5e-13

>gb|PLY86668.1| hypothetical protein LSAT_4X159841 [Lactuca sativa]
          Length = 148

 Score =  144 bits (362), Expect = 4e-40
 Identities = 87/154 (56%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
 Frame = +3

Query: 171 MSHKQTNSLSTIPFSWETIPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCFRE 350
           MSHKQT+S S IPFSWETIPG                                       
Sbjct: 1   MSHKQTHSPSAIPFSWETIPGVPKLMATPAAASIGMLDEVSKKVLSPPPPGSLRGS---- 56

Query: 351 PIMKRSVSS-IFWREEDPFLVALKECSKDYKAKSD-KKRFGSLRSKSFLWCRCSFDVEEG 524
             MKRS+SS +FWREEDPFL ALKECSKDYK K D KKRFG   SKSF WCRCSFDVEEG
Sbjct: 57  --MKRSMSSRVFWREEDPFLAALKECSKDYKGKGDMKKRFGIWGSKSFSWCRCSFDVEEG 114

Query: 525 NL--RKRPVSSSGGQVIFPEGVQSLIRMHKGSRK 620
           NL  R RP+ SSGG VI  E VQSLIR+ KG RK
Sbjct: 115 NLRGRGRPLPSSGGPVIPRERVQSLIRIQKGLRK 148


>gb|PLY92360.1| hypothetical protein LSAT_3X86260 [Lactuca sativa]
          Length = 147

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
 Frame = +3

Query: 171 MSHKQTNSLSTIPFSWETIPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCFRE 350
           MSHK+TN +  IPFSWE +PG                                    FRE
Sbjct: 1   MSHKKTNLVIHIPFSWEKMPGVPKSMASPRCALVPGLSRHNLEVQRKKTLPLPPGS-FRE 59

Query: 351 PIMKRSVSSIFWREEDPFLVALKECSKD---YKAKSD-KKRFGSL--RSKSFLW-CRCSF 509
           P+   S   ++  EEDPF+ A+ +C+KD   YK + D KKRFGS    SKSFL  C+ SF
Sbjct: 60  PLRSES-KRMYSSEEDPFIAAIIKCTKDCDNYKGQDDIKKRFGSRVWTSKSFLSSCKHSF 118

Query: 510 DVEEGNLRKRPVS 548
           DVEEG+L  RP S
Sbjct: 119 DVEEGHLSTRPSS 131


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