BLASTX nr result

ID: Chrysanthemum21_contig00038525 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038525
         (510 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10867.1| FAR1 DNA binding domain-containing protein [Cynar...    57   1e-06
ref|XP_019176456.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    57   2e-06
ref|XP_019186463.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    56   4e-06
ref|XP_019198418.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    56   4e-06
ref|XP_017227909.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    56   5e-06

>gb|KVI10867.1| FAR1 DNA binding domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 320

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
 Frame = -3

Query: 361 YSKLPSMSNSLEDDSMQGEPSTPRSTNTV*DNVV-----DAESVTQVGSYQPTQPGSKFW 197
           Y +  S +  LE++S   +       ++  D  +     +  +  Q G+   T  GSKFW
Sbjct: 8   YDEEHSKATHLEEESSMNKEHNMEEFDSEEDKAIPSCRCNVTADLQHGNEIETSDGSKFW 67

Query: 196 IPEAKN--KPVEGTQFDTIEQALKFYKEYAREGGFEVRRGGQSNRKKKTKSRSEILLLF 26
           IP+ ++  KP+ G+ F +++ A++ Y  YA++GGF +RR  Q     KTK    ++L +
Sbjct: 68  IPKVEDDVKPIVGSVFQSLDNAIEMYANYAQKGGFTIRRSTQ-----KTKRDGSVILKY 121


>ref|XP_019176456.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ipomoea nil]
          Length = 732

 Score = 56.6 bits (135), Expect(2) = 2e-06
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = -3

Query: 217 QPGSKFWIPEAKNK--PVEGTQFDTIEQALKFYKEYAREGGFEVRRGGQSNRKKKTKSRS 44
           + G+K+W P  +N+  P EG QFDT++  + FY +YA+E GF+VR G +   +K   S  
Sbjct: 5   EDGAKYWKPTTQNEKTPYEGQQFDTVDTGIDFYVDYAKEAGFDVRHGTKRRNRKGEVSIK 64

Query: 43  EIL 35
            +L
Sbjct: 65  HLL 67



 Score = 22.7 bits (47), Expect(2) = 2e-06
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 45  LKYFCCSREGVKPSP 1
           +K+  CSREG K  P
Sbjct: 63  IKHLLCSREGYKAEP 77


>ref|XP_019186463.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ipomoea nil]
          Length = 726

 Score = 55.8 bits (133), Expect(2) = 4e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -3

Query: 211 GSKFWIPEAKNK--PVEGTQFDTIEQALKFYKEYAREGGFEVRRG 83
           GSK+WIP    +  P EG +F+T+E  ++FY+EYA+E GF+VR G
Sbjct: 7   GSKYWIPPTTKEKTPFEGQRFETVENGIEFYEEYAKEAGFDVRHG 51



 Score = 22.3 bits (46), Expect(2) = 4e-06
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 45 LKYFCCSREGVK 10
          +KY  CSREG K
Sbjct: 63 IKYMLCSREGYK 74


>ref|XP_019198418.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ipomoea nil]
          Length = 345

 Score = 55.8 bits (133), Expect(2) = 4e-06
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -3

Query: 211 GSKFWIPEAKNK--PVEGTQFDTIEQALKFYKEYAREGGFEVRRG 83
           GSK+WIP    +  P EG +F+T+E  ++FY+EYA+E GF+VR G
Sbjct: 7   GSKYWIPPTTKEKTPFEGQRFETVENGIEFYEEYAKEAGFDVRHG 51



 Score = 22.3 bits (46), Expect(2) = 4e-06
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 45 LKYFCCSREGVK 10
          +KY  CSREG K
Sbjct: 63 IKYMLCSREGYK 74


>ref|XP_017227909.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Daucus carota
           subsp. sativus]
          Length = 762

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
 Frame = -3

Query: 220 TQPGSKFWIPEAKN--KPVEGTQFDTIEQALKFYKEYAREGGFEVRRGGQ-SNRKKKTKS 50
           T  G K WIP   +  KP     F T+E A KFY+EY R+GGF+VR+ GQ SNR     S
Sbjct: 62  TPTGDKVWIPSCDDVYKPRTNQHFQTLEDAFKFYREYGRQGGFDVRKYGQKSNRSGNVVS 121

Query: 49  R 47
           +
Sbjct: 122 K 122


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